HHsearch results for GI: 255764473 and protein with PDBid: 1zq6_A
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=100.00 E-value=0 Score=596.40 Aligned_cols=297 Identities=32% Similarity=0.539 Sum_probs=260.4
Q ss_pred CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCC-
Q ss_conf 9888771784458999999999999999966523666544379879999428883578999989863475433332100-
Q gi|255764473|r 2 MTYPKHFADLSNISSSNLSCIIEVAKKIKNSSENIFENKPLSGKVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSGSE- 80 (306)
Q Consensus 2 m~~~k~~l~~~dl~~~~i~~ll~~A~~~k~~~~~~~~~~~l~gk~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~~- 80 (306)
|+ |||||+++||+++++..||++|.++|+.+. ...|+||+++++|+|||||||+|||+|+++|||+++++++..
T Consensus 21 m~-mkhlLsi~dls~~ei~~l~~~A~~~k~~~~----~~~L~gk~v~~lF~epSTRTR~SFe~A~~~LGg~~i~l~~~~s 95 (359)
T 1zq6_A 21 MS-LKHFLNTQDWSRAELDALLTQAALFKRNKL----GSELKGKSIALVFFNPSMRTRTSFELGAFQLGGHAVVLQPGKD 95 (359)
T ss_dssp ---CCCBSCGGGSCHHHHHHHHHHHHHHHHCCC----CCTTTTCEEEEEESSCCHHHHHHHHHHHHHTTCEEEEECHHHH
T ss_pred CC-CCCCCCHHHCCHHHHHHHHHHHHHHHHCCC----CCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCC
T ss_conf 86-665075233999999999999999983678----7668999899985589710899999999985995898278776
Q ss_pred -----------CCCCCCCCHHHHHHHHHHCCCEEEEEEC----------CCCHHHHHHCCCCCCEECCCCCCCHHHHHHH
Q ss_conf -----------0012321079999975300101112101----------3200677630124412404333202467876
Q gi|255764473|r 81 -----------MQLGRAETIGDTAKVLSRYVDAIVMRTT----------NHSRLLELTEYATVPVINALTDNTHPCQIIA 139 (306)
Q Consensus 81 -----------ss~~kgEsl~Dt~~~ls~~~D~iviR~~----------~~~~~~~~~~~~~vpvINa~~~~~HPtQaL~ 139 (306)
++..||||++||++++|+|+|+||+|++ ++..+.++++++++||||+| +++||||+|+
T Consensus 96 ~~~~~~~~~s~~~~~~~Es~~Dt~~~ls~y~D~iviR~~~~~~~~~~~~~~~~~~~~a~~~~vpvin~g-~~~HPtQaLl 174 (359)
T 1zq6_A 96 AWPIEFNLGTVMDGDTEEHIAEVARVLGRYVDLIGVRAFPKFVDWSKDREDQVLKSFAKYSPVPVINME-TITHPCQELA 174 (359)
T ss_dssp SCCEECSSSCCCCSSCCEEHHHHHHHHHHHCSEEEEECCCCSSCHHHHTTCHHHHHHHHHCSSCEEESS-SSCCHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC-CCCCCHHHHH
T ss_conf 442134666320366415799999987524878999636432220046016899999976798621688-8778547899
Q ss_pred HHHHHHHHCCC--CCCCCEEEE----CC--CCCCCCCHHHCCCCCCEEEEEECHH-CCCCCCCCHHH----HHCCCCCCC
Q ss_conf 55766420013--367730461----04--5555431010012331257652000-01321000024----320133222
Q gi|255764473|r 140 DIMTFEEHRGS--VKGKLFSWS----GD--GNNILHSLIEGAARFNYLLNIATPI-GSEPRNEYLNW----ARNQGASVA 206 (306)
Q Consensus 140 D~~Ti~e~~g~--l~~~~i~~v----Gd--~~~v~hS~i~~~~~~g~~v~~~~P~-~~~~~~~~~~~----~~~~g~~i~ 206 (306)
|+|||+|++|. ++|+++.++ || ++||+||++.++++||+++.+++|+ .+.|++...+. +...|.++.
T Consensus 175 Dl~Ti~e~~g~~~~~g~~~~~~~~~~gd~~~~~v~~S~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~i~ 254 (359)
T 1zq6_A 175 HALALQEHFGTPDLRGKKYVLTWTYHPKPLNTAVANSALTIATRMGMDVTLLCPTPDYILDERYMDWAAQNVAESGGSLQ 254 (359)
T ss_dssp HHHHHHHHHTSSCCTTCEEEEEECCCSSCCCSHHHHHHHHHHHHTTCEEEEECSSGGGCCCHHHHHHHHHHHHHHSCEEE
T ss_pred HHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEE
T ss_conf 99999997198322586378985114785543788888888987598799980684358888999998777887088618
Q ss_pred CCCCHHHHCCCCCCCCCCCEEECCCCCHH----HHHHCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCHHHHCCCCC
Q ss_conf 13664663068733222100000022013----33100111233688996289872992599987487357679679971
Q gi|255764473|r 207 LFHDAVQAVKGAHCVFTDTWISMNQEFKA----REEHVFQPFQVNLSLMSMAHPDALFMHCLPAHRGEEVINEVLDGPQS 282 (306)
Q Consensus 207 ~~~d~~eal~~aD~V~~~~~~~~~~~~~~----~~~~~~~~y~i~~~~l~~a~~~~~vmHplP~~rg~EI~~~v~d~~~s 282 (306)
+++|+.++++++|+||+++|++|+.+... ...+++++|++|+++++.+ ++++||||||+|||+||+++|+++|+|
T Consensus 255 ~~~d~~ea~~~aDvvyt~~~q~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~-~~~i~MHplP~~Rg~EI~~eV~d~p~s 333 (359)
T 1zq6_A 255 VSHDIDSAYAGADVVYAKSWGALPFFGNWEPEKPIRDQYQHFIVDERKMALT-NNGVFSHCLPLRRNVKATDAVMDSPNC 333 (359)
T ss_dssp EECCHHHHHTTCSEEEEECCCCGGGTTCCTTHHHHHGGGGGGSBCHHHHHTS-SSCEEECCSCCCBTTTBCHHHHTSTTB
T ss_pred EECCHHHHHCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHCCC-CCCEEECCCCCCCCCCCCHHHHCCCCC
T ss_conf 9558889845966999853773011540356799999876348279996378-999898999999988338767579975
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 06868775599999999996255
Q gi|255764473|r 283 VVFDEAENRLHTQKAILLWCFGI 305 (306)
Q Consensus 283 ~~~~Qa~Ngl~vr~AiL~~~lG~ 305 (306)
+||+||+||+|+|||||+|+||-
T Consensus 334 ~i~~Qa~Ngl~vrmAlL~~llg~ 356 (359)
T 1zq6_A 334 IAIDEAENRLHVQKAIMAALVGQ 356 (359)
T ss_dssp CHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 69999873099999999998578