HHsearch results for GI: 255764473 and protein with PDBid: 3grf_A
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=100.00 E-value=0 Score=627.46 Aligned_cols=300 Identities=36% Similarity=0.597 Sum_probs=271.8
Q ss_pred CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCC-CCCC
Q ss_conf 887717844589999999999999999665236665443798799994288835789999898634754333321-0000
Q gi|255764473|r 4 YPKHFADLSNISSSNLSCIIEVAKKIKNSSENIFENKPLSGKVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSG-SEMQ 82 (306)
Q Consensus 4 ~~k~~l~~~dl~~~~i~~ll~~A~~~k~~~~~~~~~~~l~gk~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~-~~ss 82 (306)
.+||||+++||++++|..||++|.++|+.+.+. ...|+||+++++|+|||||||+|||+|+++|||+++++++ .+|+
T Consensus 6 ~~khll~i~dls~~ei~~ll~~A~~~k~~~~~~--~~~l~~k~v~~lF~epSTRTR~SFe~A~~~LGg~~i~l~~~~~s~ 83 (328)
T 3grf_A 6 QTRHLLTISALCPKELAYLIDRALDMKKNPAKY--TARAANKTLLAFFAKPSLRTRVSLETAMTRLGGHAIYYELGANSN 83 (328)
T ss_dssp CSCCBSSGGGSCHHHHHHHHHHHHHHHHCGGGG--TTTTTTCEEEEEESSCCHHHHHHHHHHHHHHTCEEEEEEC-----
T ss_pred CCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCC--CCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEECCCCCCCC
T ss_conf 788715143199999999999999987374445--655689889999657873169999999998599478667320123
Q ss_pred CCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCC-------CCCCCC
Q ss_conf 1232107999997530010111210132006776301244124043332024678765576642001-------336773
Q gi|255764473|r 83 LGRAETIGDTAKVLSRYVDAIVMRTTNHSRLLELTEYATVPVINALTDNTHPCQIIADIMTFEEHRG-------SVKGKL 155 (306)
Q Consensus 83 ~~kgEsl~Dt~~~ls~~~D~iviR~~~~~~~~~~~~~~~vpvINa~~~~~HPtQaL~D~~Ti~e~~g-------~l~~~~ 155 (306)
++||||++||++++++|+|++|+||++++.+.++++++++||||||++++||||+|+|+|||+|++| .+++++
T Consensus 84 ~~kgEs~~Dt~~~ls~~~d~ivvR~~~~~~~~~~a~~~~vpVINa~~~~~HPtQaL~Dl~Ti~e~~g~~~~~~~~~~~l~ 163 (328)
T 3grf_A 84 VGGKETVQDTAEVFSRMVDICTARLATKEMMREMAQHASVPCINALDDFGHPLQMVCDFMTIKEKFTAAGEFSNGFKGIK 163 (328)
T ss_dssp -----CHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHCSSCEEESSCSSCCHHHHHHHHHHHHHHHHHTTCCTTTGGGCC
T ss_pred CCCCEEHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCE
T ss_conf 67862199999987334653456525033566777507862354776566826999999999998465333467513624
Q ss_pred EEEECCC-CCCCCCHHHCCCCCCEEEEEECHHCCCCC--CCCHHHHH------CCCCCCCCCCCHHHHCCCCCCCCCCCE
Q ss_conf 0461045-55543101001233125765200001321--00002432------013322213664663068733222100
Q gi|255764473|r 156 FSWSGDG-NNILHSLIEGAARFNYLLNIATPIGSEPR--NEYLNWAR------NQGASVALFHDAVQAVKGAHCVFTDTW 226 (306)
Q Consensus 156 i~~vGd~-~~v~hS~i~~~~~~g~~v~~~~P~~~~~~--~~~~~~~~------~~g~~i~~~~d~~eal~~aD~V~~~~~ 226 (306)
++|+||. +||+||++.++.++|+++.+++|+++.+. +.....++ ..|.++++++|++++++++|+||+++|
T Consensus 164 i~~~gd~~~~v~~S~~~~~~~~g~~v~i~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~ea~~~aDvvy~~~~ 243 (328)
T 3grf_A 164 FAYCGDSMNNVTYDLMRGCALLGMECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIKIFHDCKKGCEGVDVVYTDSW 243 (328)
T ss_dssp EEEESCCSSHHHHHHHHHHHHHTCEEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEEEESSHHHHHTTCSEEEECCC
T ss_pred EEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHCCCCEEEEEHH
T ss_conf 76327776542679999999779969996365335576699999999998763259839999679999617998985011
Q ss_pred EECCCCC--HHHHHHCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 0000220--13331001112336889962898729925999874873576796799710686877559999999999625
Q gi|255764473|r 227 ISMNQEF--KAREEHVFQPFQVNLSLMSMAHPDALFMHCLPAHRGEEVINEVLDGPQSVVFDEAENRLHTQKAILLWCFG 304 (306)
Q Consensus 227 ~~~~~~~--~~~~~~~~~~y~i~~~~l~~a~~~~~vmHplP~~rg~EI~~~v~d~~~s~~~~Qa~Ngl~vr~AiL~~~lG 304 (306)
++++... .....+++.+||||.++|++++++++||||||+|||+||+++|+|+|+|+||+||+||+|+|||||+|+|+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~v~~~~l~~a~~~~i~MHplP~~Rg~EI~~~V~d~~~s~i~~Qa~Ngl~vrmAlL~~lL~ 323 (328)
T 3grf_A 244 MSYHITKEQKEARLKVLTPFQVDDAVMAVTSKRSIFMNCLPATRGEEQTASVIDGPKSVCYDEAGNRLHSAMAVLDFFLH 323 (328)
T ss_dssp C--------CCTHHHHHGGGCBCHHHHTTSCTTCEEEECSCCCTTTTBCHHHHTSTTBCHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 20333055579999876424643999963699998989989998880188885798756999997209999999999984
Q ss_pred C
Q ss_conf 5
Q gi|255764473|r 305 I 305 (306)
Q Consensus 305 ~ 305 (306)
-
T Consensus 324 ~ 324 (328)
T 3grf_A 324 D 324 (328)
T ss_dssp C
T ss_pred H
T ss_conf 1