HHsearch results for GI: 255764473 and protein with PDBid: 3h9u_A
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, structural genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 1li4_A* 1a7a_A*
Probab=92.54 E-value=0.56 Score=25.24 Aligned_cols=245 Identities=16% Similarity=0.121 Sum_probs=133.5
Q ss_pred CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE-ECCCCCHHHHHHHHHHHHCCCCCCCCCC--
Q ss_conf 9888771784458999999999999999966523666544379879999-4288835789999898634754333321--
Q gi|255764473|r 2 MTYPKHFADLSNISSSNLSCIIEVAKKIKNSSENIFENKPLSGKVLAMI-FEKPSTRTRVSFEVAMKHLGGDTIFLSG-- 78 (306)
Q Consensus 2 m~~~k~~l~~~dl~~~~i~~ll~~A~~~k~~~~~~~~~~~l~gk~i~~l-F~e~StRTR~SFe~A~~~LG~~~~~~~~-- 78 (306)
|..-|++ ++.++.+.+|+..-..---+....++....+||+|.+|+.- -.++ .-.-.-..-+.+|+.|..-..
T Consensus 2 ~y~vkd~-~la~~G~~~i~wa~~~MP~L~~lr~~~~~~kPl~G~rI~~clHlt~---kTA~L~~tL~~~GA~V~~~~~Np 77 (436)
T 3h9u_A 2 MYKVRDI-SLAEWGRRELELAENEMPGLMELRREYGPSKPLKGAKIAGCLHMTM---QTAVLIETLVELGAEVRWASCNI 77 (436)
T ss_dssp -CEESCG-GGHHHHHHHHHHHHHHCHHHHHHHHHHTTTCTTTTCEEEEESCCSH---HHHHHHHHHHHTTCEEEEECSST
T ss_pred CCCCCCC-HHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCEEEEEECCHH---HHHHHHHHHHHCCCEEEEECCCC
T ss_conf 7403671-5657778999999977989999999963569989988999970249---99999999998698899955897
Q ss_pred CC---------------CCCCCCCCHHHHHHHHHH---------CCCEEEEEEC---------------------CC---
Q ss_conf 00---------------001232107999997530---------0101112101---------------------32---
Q gi|255764473|r 79 SE---------------MQLGRAETIGDTAKVLSR---------YVDAIVMRTT---------------------NH--- 110 (306)
Q Consensus 79 ~~---------------ss~~kgEsl~Dt~~~ls~---------~~D~iviR~~---------------------~~--- 110 (306)
-+ .--.+|||.++....+.. ..|+++=-.. ++
T Consensus 78 ~STqDdvaAaL~~~Gi~VfA~~g~~~eey~~~~~~~L~~~~~~~~P~liiDDGgDl~~~~~~~~~~l~~~iiG~~EETTT 157 (436)
T 3h9u_A 78 FSTQDHAAAAIAKRGIPVFAWKGETEEEYMWCMKQTLKGFSGDGYPNMLLDDGGDLTNYVLDECKELDGKIYGVSEETTT 157 (436)
T ss_dssp TTCCHHHHHHHHHTTCCEEECTTCCHHHHHHHHHHTTSCBTTTBCCSEEEESSSHHHHHHHHHC-CCTTTCCCEEECSHH
T ss_pred CCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHEECCCCCCCCCCEEEEEECCCH
T ss_conf 53238999999976977998469998999999997631327888725898310002200013344210012421221561
Q ss_pred --CHHHHHHC--CCCCCEECCCCC-------CCHHH-HHHHHHHHHHHHCC-CCCCCCEEEECCCCCCCCCHHHCCCCCC
Q ss_conf --00677630--124412404333-------20246-78765576642001-3367730461045555431010012331
Q gi|255764473|r 111 --SRLLELTE--YATVPVINALTD-------NTHPC-QIIADIMTFEEHRG-SVKGKLFSWSGDGNNILHSLIEGAARFN 177 (306)
Q Consensus 111 --~~~~~~~~--~~~vpvINa~~~-------~~HPt-QaL~D~~Ti~e~~g-~l~~~~i~~vGd~~~v~hS~i~~~~~~g 177 (306)
..++.+.+ ...+||||--+. +-|=| |...|- |.+.-+ -+.|++++.+|-+ .+.......+.-+|
T Consensus 158 Gv~RL~~m~~~g~L~~Pvi~VNDs~tK~~fDN~yGtgqS~~d~--i~r~Tn~~laGk~vvV~GYG-~vGrGvA~~~rg~G 234 (436)
T 3h9u_A 158 GVKNLYKRLQRGKLTIPAMNVNDSVTKSKFDNLYGCRESLVDG--IKRATDVMIAGKTACVCGYG-DVGKGCAAALRGFG 234 (436)
T ss_dssp HHHHHHHHHHHTCCCSCEEECTTSHHHHTTHHHHHHHHHHHHH--HHHHHCCCCTTCEEEEECCS-HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHCCCCCCCEEEECCCCCCCHHCCEEEECHHHHHH--HHHHCCCCCCCCEEEEECCC-CCCHHHHHHHCCCC
T ss_conf 8999988886178788669845732031212305642229999--99860877578679995555-20323788853599
Q ss_pred EEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCHHHHHHCCCCCCCCHHHHHCCCCC
Q ss_conf 25765200001321000024320133222136646630687332221000000220133310011123368899628987
Q gi|255764473|r 178 YLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFKAREEHVFQPFQVNLSLMSMAHPD 257 (306)
Q Consensus 178 ~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~~~~~~~~~~y~i~~~~l~~a~~~ 257 (306)
..|.++-... -..-.+.-.|..+ ...+++++.+|+++|-. +.. =-++.+-++..|.+
T Consensus 235 a~V~V~EvDP-----i~aleA~mdGf~V---~~~~~a~~~~DifvTaT----Gn~-----------~vi~~eh~~~mKdg 291 (436)
T 3h9u_A 235 ARVVVTEVDP-----INALQAAMEGYQV---LLVEDVVEEAHIFVTTT----GND-----------DIITSEHFPRMRDD 291 (436)
T ss_dssp CEEEEECSCH-----HHHHHHHHTTCEE---CCHHHHTTTCSEEEECS----SCS-----------CSBCTTTGGGCCTT
T ss_pred CEEEEEECCH-----HHHHHHHHCCCEE---CCHHHHHHHCCEEEEEC----CCC-----------CCCCHHHHHHHHCC
T ss_conf 8899993681-----8889998638850---22999883489999946----998-----------75889999987579
Q ss_pred CEEECCCCCCCCCCCCHHHHC
Q ss_conf 299259998748735767967
Q gi|255764473|r 258 ALFMHCLPAHRGEEVINEVLD 278 (306)
Q Consensus 258 ~~vmHplP~~rg~EI~~~v~d 278 (306)
+++.--|- .+.||+-+.+.
T Consensus 292 aIl~N~Gh--fd~EId~~~L~ 310 (436)
T 3h9u_A 292 AIVCNIGH--FDTEIQVAWLK 310 (436)
T ss_dssp EEEEECSS--SGGGBCHHHHH
T ss_pred CEEEECCC--CCCCCCHHHHH
T ss_conf 68993167--74001088786