Query gi|255764473|ref|YP_003064846.2| ornithine carbamoyltransferase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 306
No_of_seqs 122 out of 4501
Neff 7.3
Searched_HMMs 23785
Date Mon May 30 11:47:04 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 255764473.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1pvv_A Otcase, ornithine carba 100.0 0 0 653.0 24.7 305 2-306 3-313 (315)
2 2w37_A Ornithine carbamoyltran 100.0 0 0 644.7 24.0 304 3-306 26-354 (359)
3 1ml4_A Aspartate transcarbamoy 100.0 0 0 643.2 24.7 303 2-306 1-308 (308)
4 3gd5_A Otcase, ornithine carba 100.0 0 0 640.8 22.4 298 3-304 11-313 (323)
5 1duv_G Octase-1, ornithine tra 100.0 0 0 636.2 24.8 302 4-305 4-333 (333)
6 1vlv_A Otcase, ornithine carba 100.0 0 0 635.6 23.9 299 5-303 19-324 (325)
7 1oth_A Protein (ornithine tran 100.0 0 0 632.5 25.9 301 4-305 5-311 (321)
8 2i6u_A Otcase, ornithine carba 100.0 0 0 631.5 24.0 299 4-304 1-305 (307)
9 1dxh_A Ornithine carbamoyltran 100.0 0 0 627.8 24.2 303 4-306 5-335 (335)
10 2ef0_A Ornithine carbamoyltran 100.0 0 0 628.6 22.6 295 1-303 5-300 (301)
11 3grf_A Ornithine carbamoyltran 100.0 0 0 627.5 23.0 300 4-305 6-324 (328)
12 2rgw_A Aspartate carbamoyltran 100.0 0 0 622.2 23.6 296 5-304 1-301 (306)
13 3csu_A Protein (aspartate carb 100.0 0 0 615.7 22.0 295 4-305 5-306 (310)
14 1pg5_A Aspartate carbamoyltran 100.0 0 0 597.7 23.8 294 5-305 1-299 (299)
15 1js1_X Transcarbamylase; alpha 100.0 0 0 598.7 21.8 288 5-304 1-315 (324)
16 1zq6_A Otcase, ornithine carba 100.0 0 0 596.4 23.5 297 2-305 21-356 (359)
17 2at2_A Aspartate carbamoyltran 100.0 0 0 599.8 20.3 286 5-304 1-290 (300)
18 3d6n_B Aspartate carbamoyltran 100.0 0 0 591.0 20.2 283 5-303 1-290 (291)
19 3p2o_A Bifunctional protein fo 96.6 0.013 5.5E-07 35.9 8.6 187 5-223 4-209 (285)
20 3jtm_A Formate dehydrogenase, 96.6 0.01 4.3E-07 36.6 8.0 132 114-264 102-256 (351)
21 2o4c_A Erythronate-4-phosphate 96.4 0.0093 3.9E-07 36.9 6.7 140 114-276 74-216 (380)
22 3oet_A Erythronate-4-phosphate 96.3 0.01 4.2E-07 36.7 6.7 141 114-277 77-220 (381)
23 1mx3_A CTBP1, C-terminal bindi 96.3 0.016 6.9E-07 35.3 7.6 136 114-272 101-264 (347)
24 1xdw_A NAD+-dependent (R)-2-hy 96.2 0.043 1.8E-06 32.5 9.3 134 115-274 86-241 (331)
25 3kbo_A Glyoxylate/hydroxypyruv 96.1 0.022 9.4E-07 34.4 7.5 131 119-273 85-235 (315)
26 1gdh_A D-glycerate dehydrogena 95.8 0.025 1.1E-06 34.1 6.9 134 112-264 81-238 (320)
27 1b0a_A Protein (fold bifunctio 95.7 0.1 4.3E-06 30.1 9.5 169 8-185 5-191 (288)
28 1wwk_A Phosphoglycerate dehydr 95.7 0.027 1.2E-06 33.8 6.4 136 114-273 82-238 (307)
29 2dbq_A Glyoxylate reductase; D 95.5 0.028 1.2E-06 33.8 6.0 138 114-275 83-248 (334)
30 2j6i_A Formate dehydrogenase; 95.5 0.081 3.4E-06 30.7 8.4 126 121-264 109-257 (364)
31 3d4o_A Dipicolinate synthase s 95.5 0.027 1.1E-06 33.9 5.9 94 149-264 151-244 (293)
32 2g76_A 3-PGDH, D-3-phosphoglyc 95.5 0.092 3.9E-06 30.4 8.5 137 115-275 106-263 (335)
33 2nac_A NAD-dependent formate d 95.4 0.087 3.6E-06 30.6 8.2 132 114-264 129-283 (393)
34 2rir_A Dipicolinate synthase, 95.4 0.031 1.3E-06 33.5 5.9 97 146-264 149-246 (300)
35 2ekl_A D-3-phosphoglycerate de 95.3 0.036 1.5E-06 33.1 5.9 130 114-264 84-232 (313)
36 1qp8_A Formate dehydrogenase; 95.2 0.096 4E-06 30.3 8.0 90 150-264 121-210 (303)
37 3evt_A Phosphoglycerate dehydr 95.1 0.056 2.3E-06 31.8 6.6 136 115-274 78-234 (324)
38 3l07_A Bifunctional protein fo 95.1 0.18 7.7E-06 28.4 10.9 185 8-223 6-210 (285)
39 2c2x_A Methylenetetrahydrofola 95.1 0.18 7.8E-06 28.4 10.5 186 8-224 5-210 (281)
40 3hg7_A D-isomer specific 2-hyd 95.0 0.059 2.5E-06 31.7 6.3 99 115-223 83-200 (324)
41 3ba1_A HPPR, hydroxyphenylpyru 94.9 0.085 3.6E-06 30.6 6.9 134 114-274 103-258 (333)
42 1ygy_A PGDH, D-3-phosphoglycer 94.8 0.097 4.1E-06 30.2 7.1 138 114-275 82-240 (529)
43 1a4i_A Methylenetetrahydrofola 94.6 0.25 1E-05 27.6 9.0 189 6-223 4-214 (301)
44 1sc6_A PGDH, D-3-phosphoglycer 94.6 0.15 6.4E-06 28.9 7.6 137 113-275 84-241 (404)
45 2cuk_A Glycerate dehydrogenase 94.5 0.15 6.5E-06 28.9 7.6 89 150-264 141-229 (311)
46 1j4a_A D-LDH, D-lactate dehydr 94.1 0.13 5.4E-06 29.4 6.3 93 150-264 143-235 (333)
47 1dxy_A D-2-hydroxyisocaproate 94.0 0.23 9.7E-06 27.8 7.5 136 114-275 84-241 (333)
48 2pi1_A D-lactate dehydrogenase 93.3 0.15 6.4E-06 28.9 5.6 135 115-274 81-237 (334)
49 2w2k_A D-mandelate dehydrogena 93.1 0.31 1.3E-05 26.9 6.9 132 114-264 96-256 (348)
50 3k5p_A D-3-phosphoglycerate de 92.9 0.44 1.8E-05 25.9 7.5 135 114-274 96-251 (416)
51 3gg9_A D-3-phosphoglycerate de 92.8 0.17 7.1E-06 28.7 5.2 131 114-264 91-251 (352)
52 3h9u_A Adenosylhomocysteinase; 92.5 0.56 2.4E-05 25.2 13.8 245 2-278 2-310 (436)
53 3ce6_A Adenosylhomocysteinase; 92.4 0.58 2.4E-05 25.2 14.2 240 9-279 25-374 (494)
54 1u8x_X Maltose-6'-phosphate gl 92.4 0.044 1.8E-06 32.5 1.8 55 89-143 151-209 (472)
55 3gvp_A Adenosylhomocysteinase 91.7 0.7 2.9E-05 24.6 14.1 241 10-280 20-321 (435)
56 3l49_A ABC sugar (ribose) tran 91.6 0.35 1.5E-05 26.6 5.7 85 42-130 3-95 (291)
57 3dfz_A SIRC, precorrin-2 dehyd 91.4 0.077 3.3E-06 30.9 2.2 88 132-223 10-97 (223)
58 1up7_A 6-phospho-beta-glucosid 90.5 0.17 7.1E-06 28.6 3.2 23 9-31 34-56 (417)
59 2d0i_A Dehydrogenase; structur 90.4 0.57 2.4E-05 25.2 5.8 100 114-223 80-206 (333)
60 1s6y_A 6-phospho-beta-glucosid 90.0 0.26 1.1E-05 27.4 3.8 56 89-144 132-191 (450)
61 2q5c_A NTRC family transcripti 88.8 0.73 3.1E-05 24.5 5.4 107 89-207 38-147 (196)
62 3c24_A Putative oxidoreductase 88.2 0.18 7.7E-06 28.4 2.0 38 40-79 7-44 (286)
63 3gvx_A Glycerate dehydrogenase 87.6 0.67 2.8E-05 24.7 4.5 61 150-223 119-179 (290)
64 2pju_A Propionate catabolism o 87.6 0.64 2.7E-05 24.9 4.4 110 87-208 50-160 (225)
65 3oj0_A Glutr, glutamyl-tRNA re 87.6 0.21 8.7E-06 28.1 1.9 71 149-224 17-87 (144)
66 3e61_A Putative transcriptiona 84.5 2.1 8.7E-05 21.5 8.3 114 45-162 9-131 (277)
67 3dzb_A Prephenate dehydrogenas 83.9 0.25 1E-05 27.6 0.9 89 99-187 65-182 (317)
68 1edz_A 5,10-methylenetetrahydr 80.8 2.9 0.00012 20.6 10.9 209 2-224 1-252 (320)
69 3fef_A Putative glucosidase LP 79.4 1.3 5.5E-05 22.8 3.2 55 89-143 126-184 (450)
70 1vjt_A Alpha-glucosidase; TM07 78.6 0.74 3.1E-05 24.4 1.8 131 9-141 46-205 (483)
71 3d64_A Adenosylhomocysteinase; 78.2 3.4 0.00014 20.1 5.4 239 10-279 41-377 (494)
72 1gpj_A Glutamyl-tRNA reductase 77.3 0.76 3.2E-05 24.4 1.5 119 143-284 157-283 (404)
73 3aek_B Light-independent proto 77.1 3.5 0.00015 20.1 4.8 76 150-226 277-358 (525)
74 2pv7_A T-protein [includes: ch 76.6 1.4 5.8E-05 22.7 2.7 86 45-141 22-112 (298)
75 1pjq_A CYSG, siroheme synthase 76.5 1.3 5.3E-05 22.9 2.5 77 100-181 242-325 (457)
76 2egg_A AROE, shikimate 5-dehyd 76.2 3.9 0.00016 19.7 5.5 174 46-225 24-212 (297)
77 3exa_A TRNA delta(2)-isopenten 76.2 3.5 0.00015 20.0 4.6 93 43-140 2-110 (322)
78 1ecf_A Glutamine phosphoribosy 75.2 1.4 5.9E-05 22.6 2.4 133 49-191 241-403 (504)
79 3n58_A Adenosylhomocysteinase; 74.2 4.3 0.00018 19.4 4.9 239 10-279 11-347 (464)
80 3gg2_A Sugar dehydrogenase, UD 73.7 4.5 0.00019 19.3 4.9 75 149-229 314-398 (450)
81 2qu7_A Putative transcriptiona 73.6 4.5 0.00019 19.3 4.7 82 44-129 8-92 (288)
82 3m9w_A D-xylose-binding peripl 72.5 4.2 0.00018 19.5 4.3 81 46-129 4-91 (313)
83 2gcg_A Glyoxylate reductase/hy 72.2 4.8 0.0002 19.1 6.8 132 113-264 91-246 (330)
84 2bw0_A 10-FTHFDH, 10-formyltet 70.9 3.9 0.00017 19.7 3.8 110 8-140 27-147 (329)
85 3jy6_A Transcriptional regulat 70.6 5.2 0.00022 18.9 6.6 113 44-161 7-131 (276)
86 2uyy_A N-PAC protein; long-cha 70.5 1.3 5.7E-05 22.8 1.4 51 67-117 50-104 (316)
87 1v8b_A Adenosylhomocysteinase; 69.0 4 0.00017 19.7 3.5 237 10-277 12-355 (479)
88 1obb_A Maltase, alpha-glucosid 66.7 2.7 0.00012 20.7 2.3 132 9-142 35-187 (480)
89 3gv0_A Transcriptional regulat 65.9 6.5 0.00027 18.3 7.4 114 43-163 7-137 (288)
90 3ijp_A DHPR, dihydrodipicolina 65.9 4 0.00017 19.6 3.1 33 99-131 88-122 (288)
91 3brq_A HTH-type transcriptiona 65.8 6.5 0.00028 18.3 5.3 82 45-130 20-110 (296)
92 3d0o_A L-LDH 1, L-lactate dehy 65.8 3.3 0.00014 20.2 2.6 41 90-130 104-150 (317)
93 3fi9_A Malate dehydrogenase; s 65.4 1.7 7.2E-05 22.1 1.1 10 70-79 76-85 (343)
94 2rgy_A Transcriptional regulat 64.9 6.8 0.00029 18.1 5.9 83 44-128 8-97 (290)
95 1yrl_A Ketol-acid reductoisome 64.9 1.9 8.1E-05 21.7 1.3 32 40-74 33-64 (491)
96 1tjy_A Sugar transport protein 64.8 6.8 0.00029 18.1 6.2 84 43-129 2-93 (316)
97 2q3e_A UDP-glucose 6-dehydroge 64.4 3.6 0.00015 19.9 2.6 79 148-228 324-420 (467)
98 2i99_A MU-crystallin homolog; 63.8 7.1 0.0003 18.0 5.0 108 150-279 132-242 (312)
99 3eph_A TRNA isopentenyltransfe 63.2 5.9 0.00025 18.5 3.5 90 45-140 3-109 (409)
100 1fmt_A Methionyl-tRNA FMet for 63.1 7.3 0.00031 17.9 4.2 88 46-140 28-129 (314)
101 2p2s_A Putative oxidoreductase 62.6 4 0.00017 19.7 2.5 15 60-74 80-94 (336)
102 3crm_A TRNA delta(2)-isopenten 62.5 6.7 0.00028 18.2 3.7 92 45-141 6-113 (323)
103 2h5g_A Delta 1-pyrroline-5-car 62.2 7.6 0.00032 17.8 5.4 85 45-133 142-253 (463)
104 1zcj_A Peroxisomal bifunctiona 61.8 7.7 0.00033 17.8 4.1 30 91-120 131-162 (463)
105 1lu9_A Methylene tetrahydromet 60.6 4.1 0.00017 19.6 2.3 81 143-224 108-195 (287)
106 1hyh_A L-hicdh, L-2-hydroxyiso 59.8 4.7 0.0002 19.2 2.5 71 89-164 102-180 (309)
107 3huu_A Transcription regulator 59.3 8.6 0.00036 17.5 5.7 82 44-129 22-114 (305)
108 3h75_A Periplasmic sugar-bindi 58.8 8.7 0.00037 17.4 3.9 79 48-129 5-94 (350)
109 1np3_A Ketol-acid reductoisome 58.7 2.5 0.0001 21.0 0.9 32 40-74 12-43 (338)
110 1mv8_A GMD, GDP-mannose 6-dehy 57.1 6.7 0.00028 18.2 2.9 78 148-225 308-398 (436)
111 1x7d_A Ornithine cyclodeaminas 56.7 4.6 0.00019 19.2 2.0 73 150-223 126-200 (350)
112 2iks_A DNA-binding transcripti 56.3 9.6 0.0004 17.2 6.1 82 45-130 21-109 (293)
113 2qiw_A PEP phosphonomutase; NP 56.1 8.9 0.00037 17.4 3.4 46 22-80 5-50 (255)
114 2o3j_A UDP-glucose 6-dehydroge 56.0 5.1 0.00021 19.0 2.1 80 148-229 330-425 (481)
115 1bg6_A N-(1-D-carboxylethyl)-L 55.9 4.2 0.00018 19.5 1.7 22 99-120 75-99 (359)
116 2fn9_A Ribose ABC transporter, 55.2 10 0.00042 17.1 5.6 82 42-128 1-90 (290)
117 1qgu_B Protein (nitrogenase mo 55.2 10 0.00042 17.1 4.4 32 150-182 357-388 (519)
118 3ic5_A Putative saccharopine d 54.4 2.1 9E-05 21.4 -0.0 65 153-223 5-75 (118)
119 2o1e_A YCDH; alpha-beta protei 53.8 11 0.00044 16.9 3.8 13 168-180 199-211 (312)
120 3dcm_X AdoMet, uncharacterized 53.0 5.1 0.00022 18.9 1.8 101 166-269 31-166 (192)
121 2f1k_A Prephenate dehydrogenas 52.9 4.9 0.00021 19.1 1.7 13 99-111 57-69 (279)
122 2q7d_A Inositol-tetrakisphosph 51.5 8 0.00034 17.7 2.5 43 39-81 13-57 (346)
123 3d02_A Putative LACI-type tran 51.2 10 0.00043 17.0 3.0 70 58-129 22-94 (303)
124 1l7b_A DNA ligase; BRCT, autos 51.1 11 0.00044 16.9 3.1 66 39-127 5-71 (92)
125 2vk2_A YTFQ, ABC transporter p 51.1 10 0.00044 16.9 3.1 80 46-129 4-91 (306)
126 3m2t_A Probable dehydrogenase; 50.4 9.2 0.00039 17.3 2.7 38 56-93 78-115 (359)
127 1pjc_A Protein (L-alanine dehy 50.3 9 0.00038 17.3 2.7 99 150-261 164-264 (361)
128 1m1n_B Nitrogenase molybdenum- 50.1 12 0.0005 16.5 4.8 34 149-183 359-392 (522)
129 1evy_A Glycerol-3-phosphate de 50.0 7.2 0.0003 18.0 2.1 15 50-64 90-104 (366)
130 1xhl_A Short-chain dehydrogena 49.2 4.1 0.00017 19.6 0.8 34 41-78 23-58 (297)
131 3brs_A Periplasmic binding pro 49.0 12 0.00052 16.4 6.6 86 42-130 3-99 (289)
132 3g1w_A Sugar ABC transporter; 48.8 13 0.00053 16.4 5.7 69 57-127 21-92 (305)
133 2h0a_A TTHA0807, transcription 48.8 13 0.00053 16.4 4.8 111 46-161 1-122 (276)
134 1ldn_A L-lactate dehydrogenase 48.0 4 0.00017 19.6 0.6 20 110-129 127-149 (316)
135 1pzg_A LDH, lactate dehydrogen 47.9 6.7 0.00028 18.2 1.7 41 89-129 112-158 (331)
136 1wcw_A Uroporphyrinogen III sy 47.0 13 0.00056 16.2 5.2 63 42-108 6-68 (261)
137 3foz_A TRNA delta(2)-isopenten 46.5 14 0.00057 16.2 3.6 91 45-140 11-117 (316)
138 3k6j_A Protein F01G10.3, confi 46.4 8.4 0.00035 17.5 2.0 18 153-170 223-245 (460)
139 3ec7_A Putative dehydrogenase; 46.2 6.7 0.00028 18.2 1.5 39 42-80 83-121 (357)
140 3c7a_A Octopine dehydrogenase; 46.1 8.2 0.00034 17.6 1.9 11 100-110 83-93 (404)
141 2h3h_A Sugar ABC transporter, 46.1 14 0.00058 16.1 3.3 69 57-128 17-89 (313)
142 1h6d_A Precursor form of gluco 46.0 9.8 0.00041 17.1 2.3 15 285-299 398-412 (433)
143 3mog_A Probable 3-hydroxybutyr 45.8 5.3 0.00022 18.9 0.9 18 11-28 33-50 (483)
144 1f0y_A HCDH, L-3-hydroxyacyl-C 45.5 6.4 0.00027 18.3 1.3 28 91-118 117-146 (302)
145 3e8x_A Putative NAD-dependent 45.4 8.4 0.00035 17.6 1.9 37 39-77 16-52 (236)
146 2ahr_A Putative pyrroline carb 45.1 7.8 0.00033 17.8 1.7 32 99-130 60-92 (259)
147 2rfl_A Putative phosphohistidi 45.0 14 0.0006 16.0 7.9 49 13-72 32-80 (173)
148 2ewd_A Lactate dehydrogenase,; 44.9 14 0.0006 16.0 3.0 39 91-129 103-147 (317)
149 3miz_A Putative transcriptiona 44.9 14 0.0006 16.0 5.8 82 44-129 13-100 (301)
150 2wdc_A SOXB, sulfur oxidation 44.6 6.6 0.00028 18.2 1.3 83 70-161 122-217 (562)
151 1vi2_A Shikimate 5-dehydrogena 44.3 15 0.00062 16.0 5.8 164 55-224 21-205 (300)
152 3ggo_A Prephenate dehydrogenas 43.8 7.8 0.00033 17.8 1.5 94 45-141 34-141 (314)
153 3evn_A Oxidoreductase, GFO/IDH 43.7 10 0.00044 16.9 2.1 17 58-74 79-95 (329)
154 3g79_A NDP-N-acetyl-D-galactos 43.4 15 0.00064 15.9 3.9 70 148-229 348-427 (478)
155 2zxr_A Single-stranded DNA spe 43.3 5.1 0.00021 19.0 0.5 12 136-147 438-449 (666)
156 1vpt_A VP39; RNA CAP, poly(A) 43.0 12 0.00051 16.5 2.4 40 149-188 72-114 (348)
157 3bbl_A Regulatory protein of L 42.8 15 0.00065 15.8 6.2 80 46-129 6-95 (287)
158 2vhw_A Alanine dehydrogenase; 42.7 9.1 0.00038 17.3 1.7 96 150-261 165-265 (377)
159 3mag_A VP39; methylated adenin 42.5 15 0.00062 15.9 2.8 39 149-187 57-98 (307)
160 2eq5_A 228AA long hypothetical 42.3 16 0.00066 15.8 3.3 41 89-129 64-105 (228)
161 3e9m_A Oxidoreductase, GFO/IDH 42.3 13 0.00053 16.4 2.4 41 53-93 74-114 (330)
162 3c1a_A Putative oxidoreductase 42.1 16 0.00067 15.7 3.4 59 49-107 72-131 (315)
163 2dpo_A L-gulonate 3-dehydrogen 42.0 4.7 0.0002 19.2 0.2 29 91-119 104-134 (319)
164 1ff9_A Saccharopine reductase; 41.6 8.1 0.00034 17.6 1.3 40 99-139 95-134 (450)
165 1qyc_A Phenylcoumaran benzylic 41.3 8.1 0.00034 17.6 1.3 13 65-77 52-64 (308)
166 3l4e_A Uncharacterized peptida 41.1 8.8 0.00037 17.4 1.4 19 60-78 47-65 (206)
167 1ao0_A Glutamine phosphoribosy 40.3 17 0.00071 15.6 2.8 133 49-192 225-383 (459)
168 3l6u_A ABC-type sugar transpor 39.8 17 0.00072 15.5 6.0 83 44-129 8-97 (293)
169 3is3_A 17BETA-hydroxysteroid d 39.4 6.5 0.00027 18.3 0.5 82 40-130 14-107 (270)
170 3d3q_A TRNA delta(2)-isopenten 39.2 8.8 0.00037 17.4 1.2 90 45-139 8-113 (340)
171 1a5z_A L-lactate dehydrogenase 39.0 10 0.00042 17.0 1.5 88 70-163 67-173 (319)
172 1y6j_A L-lactate dehydrogenase 38.8 7.9 0.00033 17.7 0.9 10 70-79 74-83 (318)
173 1ydw_A AX110P-like protein; st 38.6 13 0.00055 16.3 2.0 30 63-92 88-117 (362)
174 2izz_A Pyrroline-5-carboxylate 38.3 6.1 0.00025 18.5 0.2 32 99-130 84-120 (322)
175 3afn_B A1-R, 4-deoxy-L-erythro 38.3 8.9 0.00038 17.4 1.1 18 169-186 178-195 (258)
176 3ip3_A Oxidoreductase, putativ 37.5 19 0.00078 15.3 3.1 47 49-95 70-116 (337)
177 2x5o_A UDP-N-acetylmuramoylala 36.7 12 0.00049 16.6 1.5 21 57-77 15-35 (439)
178 3e18_A Oxidoreductase; dehydro 36.7 15 0.00065 15.8 2.1 44 51-94 70-113 (359)
179 2hmt_A YUAA protein; RCK, KTN, 36.3 4.8 0.0002 19.2 -0.5 68 149-222 2-75 (144)
180 3k96_A Glycerol-3-phosphate de 35.7 15 0.00064 15.8 2.0 43 99-141 99-146 (356)
181 2xdq_B Light-independent proto 35.6 17 0.00071 15.5 2.2 62 150-212 300-362 (511)
182 3fr7_A Putative ketol-acid red 35.6 13 0.00056 16.2 1.7 49 59-107 41-92 (525)
183 1o6z_A MDH, malate dehydrogena 35.3 13 0.00056 16.2 1.6 89 70-164 70-177 (303)
184 2hk9_A Shikimate dehydrogenase 35.1 20 0.00085 15.0 7.5 170 49-229 16-198 (275)
185 1vpd_A Tartronate semialdehyde 34.8 13 0.00054 16.3 1.5 31 157-187 139-169 (299)
186 1m1n_A Nitrogenase molybdenum- 34.2 21 0.00088 14.9 4.9 45 84-128 125-181 (491)
187 1zej_A HBD-9, 3-hydroxyacyl-CO 33.8 9.3 0.00039 17.3 0.6 21 98-118 97-117 (293)
188 2g5c_A Prephenate dehydrogenas 33.8 13 0.00054 16.3 1.3 42 99-140 62-108 (281)
189 1mio_A Nitrogenase molybdenum 33.6 21 0.0009 14.9 5.3 39 148-187 330-368 (533)
190 1dih_A Dihydrodipicolinate red 33.6 9.9 0.00042 17.1 0.7 70 98-175 71-145 (273)
191 8abp_A L-arabinose-binding pro 32.2 23 0.00095 14.7 4.2 79 45-128 3-89 (306)
192 2h78_A Hibadh, 3-hydroxyisobut 32.2 21 0.00089 14.9 2.2 13 174-186 154-166 (302)
193 3ksm_A ABC-type sugar transpor 32.0 23 0.00096 14.7 3.7 70 58-129 18-92 (276)
194 2ze6_A Isopentenyl transferase 31.9 21 0.0009 14.9 2.2 81 53-141 10-109 (253)
195 3ijr_A Oxidoreductase, short c 31.5 12 0.0005 16.6 0.8 38 39-78 42-79 (291)
196 1gee_A Glucose 1-dehydrogenase 31.2 11 0.00044 16.9 0.5 22 167-188 170-191 (261)
197 2b0j_A 5,10-methenyltetrahydro 31.1 13 0.00056 16.2 1.0 19 205-223 129-147 (358)
198 1oy0_A Ketopantoate hydroxymet 30.8 19 0.0008 15.2 1.8 14 132-145 109-122 (281)
199 3ksu_A 3-oxoacyl-acyl carrier 30.7 17 0.00073 15.5 1.6 87 41-134 8-106 (262)
200 1f06_A MESO-diaminopimelate D- 30.2 22 0.00093 14.8 2.0 11 100-110 59-69 (320)
201 3gk3_A Acetoacetyl-COA reducta 30.1 14 0.00057 16.2 0.9 21 167-187 187-207 (269)
202 3kvo_A Hydroxysteroid dehydrog 29.8 16 0.00068 15.7 1.3 92 41-134 42-144 (346)
203 3l6d_A Putative oxidoreductase 29.7 11 0.00046 16.8 0.4 10 100-109 66-75 (306)
204 1hp1_A 5'-nucleotidase; metall 29.6 16 0.00068 15.7 1.3 71 81-161 67-145 (516)
205 1byk_A Protein (trehalose oper 29.6 25 0.001 14.4 4.9 112 44-161 2-123 (255)
206 1hr8_O COX4, cytochrome C oxid 29.6 9.9 0.00042 17.1 0.2 12 50-61 8-19 (26)
207 3gve_A YFKN protein; alpha-bet 29.5 21 0.00089 14.9 1.9 94 66-161 50-170 (341)
208 1ur5_A Malate dehydrogenase; o 29.5 11 0.00045 16.8 0.4 20 110-129 123-145 (309)
209 2g04_A Probable fatty-acid-COA 29.1 25 0.0011 14.4 4.4 11 135-145 132-142 (359)
210 2ldx_A APO-lactate dehydrogena 28.7 17 0.00071 15.6 1.2 19 59-77 33-51 (331)
211 2v7p_A L-lactate dehydrogenase 28.7 26 0.0011 14.4 2.5 71 89-164 96-174 (310)
212 1c1d_A L-phenylalanine dehydro 28.5 26 0.0011 14.3 8.3 139 19-185 53-206 (355)
213 3ive_A Nucleotidase; structura 28.4 12 0.00048 16.6 0.3 71 82-161 70-148 (509)
214 3edm_A Short chain dehydrogena 27.7 16 0.00069 15.6 1.0 13 65-77 27-39 (259)
215 3nep_X Malate dehydrogenase; h 27.6 23 0.00099 14.6 1.8 71 89-164 98-176 (314)
216 1oao_A CODH, carbon monoxide d 27.4 13 0.00055 16.3 0.5 94 121-217 540-644 (674)
217 3k5i_A Phosphoribosyl-aminoimi 27.4 17 0.00073 15.5 1.1 58 44-105 24-92 (403)
218 3cky_A 2-hydroxymethyl glutara 27.3 25 0.0011 14.4 1.9 15 173-187 154-168 (301)
219 2oog_A Glycerophosphoryl diest 27.3 22 0.00091 14.9 1.6 29 49-80 34-62 (287)
220 3hcw_A Maltose operon transcri 27.3 27 0.0011 14.2 6.8 83 44-130 7-100 (295)
221 1q7e_A Hypothetical protein YF 26.6 28 0.0012 14.1 2.7 10 67-76 29-38 (428)
222 3mz0_A Inositol 2-dehydrogenas 26.3 17 0.00073 15.5 0.9 38 42-79 62-99 (344)
223 3euw_A MYO-inositol dehydrogen 26.2 28 0.0012 14.1 2.0 17 58-74 77-93 (344)
224 1g0o_A Trihydroxynaphthalene r 26.1 16 0.00068 15.7 0.8 84 41-131 26-119 (283)
225 3h7a_A Short chain dehydrogena 25.9 23 0.00098 14.6 1.5 12 172-183 172-183 (252)
226 3gt0_A Pyrroline-5-carboxylate 25.8 13 0.00054 16.4 0.2 32 99-130 63-99 (247)
227 2bln_A Protein YFBG; transfera 25.7 29 0.0012 14.0 2.9 88 45-139 24-122 (305)
228 3jyf_A 2',3'-cyclic nucleotide 25.6 16 0.00066 15.8 0.6 69 92-161 85-164 (339)
229 3ktd_A Prephenate dehydrogenas 25.5 13 0.00053 16.4 0.1 80 60-139 21-112 (341)
230 3a8t_A Adenylate isopentenyltr 25.1 30 0.0013 13.9 3.5 92 43-139 39-147 (339)
231 1b8p_A Protein (malate dehydro 25.0 18 0.00075 15.4 0.8 22 108-129 135-159 (329)
232 1z7e_A Protein aRNA; rossmann 24.9 30 0.0013 13.9 3.3 25 153-177 315-339 (660)
233 3gi1_A LBP, laminin-binding pr 24.8 30 0.0013 13.9 2.6 13 168-180 188-200 (286)
234 1mio_B Nitrogenase molybdenum 24.7 30 0.0013 13.9 7.4 138 45-183 170-341 (458)
235 1m3u_A 3-methyl-2-oxobutanoate 24.7 29 0.0012 14.0 1.8 31 99-129 174-204 (264)
236 2z2v_A Hypothetical protein PH 24.5 16 0.00069 15.6 0.6 29 111-139 115-143 (365)
237 1qo0_D AMIR; binding protein, 24.3 17 0.0007 15.6 0.5 25 53-77 19-43 (196)
238 2ioy_A Periplasmic sugar-bindi 24.3 31 0.0013 13.8 5.4 82 45-130 2-91 (283)
239 1o66_A 3-methyl-2-oxobutanoate 24.3 30 0.0013 13.9 1.8 17 60-76 27-43 (275)
240 1hye_A L-lactate/malate dehydr 23.7 30 0.0013 13.9 1.8 41 90-130 104-149 (313)
241 1meo_A Phosophoribosylglycinam 23.7 32 0.0013 13.8 3.4 37 91-127 70-107 (209)
242 2zqz_A L-LDH, L-lactate dehydr 23.4 14 0.0006 16.0 0.1 52 107-163 126-182 (326)
243 3l5l_A Xenobiotic reductase A; 23.2 32 0.0014 13.7 3.9 19 90-108 161-180 (363)
244 3cea_A MYO-inositol 2-dehydrog 23.2 32 0.0014 13.7 2.6 43 51-93 76-118 (346)
245 2v6b_A L-LDH, L-lactate dehydr 23.2 32 0.0014 13.7 2.6 86 70-164 67-172 (304)
246 1ez4_A Lactate dehydrogenase; 22.6 21 0.00086 15.0 0.7 39 91-129 103-147 (318)
247 3ezy_A Dehydrogenase; structur 22.5 33 0.0014 13.6 2.1 13 286-298 307-319 (344)
248 3ez4_A 3-methyl-2-oxobutanoate 22.4 33 0.0014 13.6 1.8 18 60-77 33-50 (269)
249 1uc8_A LYSX, lysine biosynthes 22.4 34 0.0014 13.6 4.7 75 47-127 2-79 (280)
250 1xk7_A Crotonobetainyl-COA:car 22.3 34 0.0014 13.6 3.3 10 67-76 37-46 (408)
251 2q9u_A A-type flavoprotein; fl 22.1 34 0.0014 13.6 2.6 22 280-301 384-406 (414)
252 1jf8_A Arsenate reductase; ptp 21.9 34 0.0014 13.5 1.8 71 153-224 3-81 (131)
253 2ohh_A Type A flavoprotein FPR 21.9 34 0.0014 13.5 2.3 10 214-223 304-313 (404)
254 2gci_A Probable alpha-methylac 21.7 35 0.0015 13.5 3.2 14 91-104 68-81 (360)
255 1yxm_A Pecra, peroxisomal tran 21.7 26 0.0011 14.4 1.1 38 39-78 13-50 (303)
256 2hq1_A Glucose/ribitol dehydro 21.4 25 0.001 14.4 1.0 20 167-186 167-186 (247)
257 2z04_A Phosphoribosylaminoimid 21.4 22 0.00093 14.8 0.7 44 62-105 16-63 (365)
258 2axq_A Saccharopine dehydrogen 21.1 23 0.00097 14.7 0.7 19 111-129 126-144 (467)
259 2ixa_A Alpha-N-acetylgalactosa 20.9 36 0.0015 13.4 1.8 46 49-94 94-139 (444)
260 1zh8_A Oxidoreductase; TM0312, 20.8 23 0.00099 14.6 0.7 34 60-93 96-129 (340)
261 1ja9_A 4HNR, 1,3,6,8-tetrahydr 20.7 21 0.00087 15.0 0.4 87 38-131 15-111 (274)
262 3obi_A Formyltetrahydrofolate 20.6 37 0.0015 13.4 4.2 17 59-75 67-83 (288)
263 1x0v_A GPD-C, GPDH-C, glycerol 20.6 37 0.0015 13.4 2.4 32 99-130 90-126 (354)
264 2g31_A Reticulon-4; NOGO, heli 20.5 18 0.00077 15.3 0.1 23 124-146 6-31 (60)
265 2fep_A Catabolite control prot 20.0 38 0.0016 13.3 5.4 79 44-127 16-101 (289)
No 1
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=100.00 E-value=0 Score=653.04 Aligned_cols=305 Identities=50% Similarity=0.809 Sum_probs=286.7
Q ss_pred CCC-CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 988-8771784458999999999999999966523666544379879999428883578999989863475433332100
Q gi|255764473|r 2 MTY-PKHFADLSNISSSNLSCIIEVAKKIKNSSENIFENKPLSGKVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSGSE 80 (306)
Q Consensus 2 m~~-~k~~l~~~dl~~~~i~~ll~~A~~~k~~~~~~~~~~~l~gk~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~~ 80 (306)
|+. +||||+++||++++|..||++|..+|..++++...+.|+||+++++|||||||||+|||+|+++|||+++++++.+
T Consensus 3 ~~l~gk~ll~i~dls~~~i~~ll~~A~~lk~~~~~~~~~~~L~gk~v~llF~epSTRTR~SFe~A~~~LG~~vi~~~~~~ 82 (315)
T 1pvv_A 3 VSLAGRDLLCLQDYTAEEIWTILETAKMFKIWQKIGKPHRLLEGKTLAMIFQKPSTRTRVSFEVAMAHLGGHALYLNAQD 82 (315)
T ss_dssp CCCTTCCBSCGGGSCHHHHHHHHHHHHHHHHHHHHTCCCCTTTTCEEEEEESSCCSHHHHHHHHHHHHTTSEEEEEEGGG
T ss_pred CCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCC
T ss_conf 88889982751118999999999999999877645897633699989998448973058999999997699543204222
Q ss_pred CCCCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEC
Q ss_conf 00123210799999753001011121013200677630124412404333202467876557664200133677304610
Q gi|255764473|r 81 MQLGRAETIGDTAKVLSRYVDAIVMRTTNHSRLLELTEYATVPVINALTDNTHPCQIIADIMTFEEHRGSVKGKLFSWSG 160 (306)
Q Consensus 81 ss~~kgEsl~Dt~~~ls~~~D~iviR~~~~~~~~~~~~~~~vpvINa~~~~~HPtQaL~D~~Ti~e~~g~l~~~~i~~vG 160 (306)
||++||||++||++++++|+|+||+||++++.+.++++++++|||||+++++||||+|+|+|||+|++|.++|++|+|+|
T Consensus 83 ss~~kgEs~~Dt~~~ls~y~D~iviR~~~~~~~~~~a~~s~vPVINg~~~~~HPtQaL~Dl~Ti~e~~g~~~~l~i~~vG 162 (315)
T 1pvv_A 83 LQLRRGETIADTARVLSRYVDAIMARVYDHKDVEDLAKYATVPVINGLSDFSHPCQALADYMTIWEKKGTIKGVKVVYVG 162 (315)
T ss_dssp STTTTTCCHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHCSSCEEEEECSSCCHHHHHHHHHHHHHHHSCCTTCEEEEES
T ss_pred CCCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEC
T ss_conf 34778860989999975258878886057106999998679988969998646778987678999872875687799967
Q ss_pred CCCCCCCCHHHCCCCCCEEEEEECHHCCCCCCCCHHHHH----CCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCH-H
Q ss_conf 455554310100123312576520000132100002432----01332221366466306873322210000002201-3
Q gi|255764473|r 161 DGNNILHSLIEGAARFNYLLNIATPIGSEPRNEYLNWAR----NQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFK-A 235 (306)
Q Consensus 161 d~~~v~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~~~~----~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~-~ 235 (306)
|++||+||++.++++||+++++++|+++.|++..+++++ ..|.++.+++|+.++++++|+||+++|.+++++.. .
T Consensus 163 d~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~~a~~~aDvvyt~~~~~~~~~~~~~ 242 (315)
T 1pvv_A 163 DGNNVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLHDPVKAVKDADVIYTDVWASMGQEAEAE 242 (315)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECCCCCSSTTSSSS
T ss_pred CCCCHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHCCCCEEEEHHHHHCCCCCCHH
T ss_conf 87531568999999841878998898668868999999999987198599976999985579999541887646610259
Q ss_pred HHHHCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 33100111233688996289872992599987487357679679971068687755999999999962559
Q gi|255764473|r 236 REEHVFQPFQVNLSLMSMAHPDALFMHCLPAHRGEEVINEVLDGPQSVVFDEAENRLHTQKAILLWCFGII 306 (306)
Q Consensus 236 ~~~~~~~~y~i~~~~l~~a~~~~~vmHplP~~rg~EI~~~v~d~~~s~~~~Qa~Ngl~vr~AiL~~~lG~~ 306 (306)
+...++.+||+|.++|+.++++++||||||+|||+||+++|+++|+|+||+||+||+|+|||||+++||-|
T Consensus 243 ~~~~~~~~~~l~~~~l~~~~~~~i~mHplP~~Rg~Ei~~~v~~~~~s~~~~Qa~Ngl~vrmAlL~~~lgg~ 313 (315)
T 1pvv_A 243 ERRKIFRPFQVNKDLVKHAKPDYMFMHCLPAHRGEEVTDDVIDSPNSVVWDQAENRLHAQKAVLALVMGGI 313 (315)
T ss_dssp HHHHHHGGGCBCHHHHHTSCTTCEEEECSCCCBTTTBCHHHHTSTTBCHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHCCCCHHHHHCCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99987763563399994489998998999987887008888669977699999701999999999997688
No 2
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=100.00 E-value=0 Score=644.74 Aligned_cols=304 Identities=34% Similarity=0.535 Sum_probs=286.2
Q ss_pred CCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 88877178445899999999999999996652366654437987999942888357899998986347543333210000
Q gi|255764473|r 3 TYPKHFADLSNISSSNLSCIIEVAKKIKNSSENIFENKPLSGKVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSGSEMQ 82 (306)
Q Consensus 3 ~~~k~~l~~~dl~~~~i~~ll~~A~~~k~~~~~~~~~~~l~gk~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~~ss 82 (306)
..+||||+++||+++||..||++|.++|+.++++...+.|+||+++++|+|||||||+|||+|+++|||+++++++++||
T Consensus 26 ~~gk~~l~~~d~s~~ei~~Ll~~A~~lK~~~~~~~~~~~L~gK~v~llF~epSTRTR~SFe~A~~~LGg~~i~l~~~~ss 105 (359)
T 2w37_A 26 FQGRSVLAEKDFSAAELEYLIDFGLHLKALKKAGIPHHYLEGKNIALLFEKSSTRTRSAFTTASIDLGAHPEYLGQNDIQ 105 (359)
T ss_dssp TTTCCBCCGGGSCHHHHHHHHHHHHHHHHHHHHTCCCCTTTTCEEEEEESSCCHHHHHHHHHHHHHTTCEEEEECTTTCC
T ss_pred CCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEECCCCCCC
T ss_conf 88988086011899999999999999998875699874579998999956897106999999999859968988876565
Q ss_pred CCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCC
Q ss_conf 12321079999975300101112101320067763012441240433320246787655766420013367730461045
Q gi|255764473|r 83 LGRAETIGDTAKVLSRYVDAIVMRTTNHSRLLELTEYATVPVINALTDNTHPCQIIADIMTFEEHRGSVKGKLFSWSGDG 162 (306)
Q Consensus 83 ~~kgEsl~Dt~~~ls~~~D~iviR~~~~~~~~~~~~~~~vpvINa~~~~~HPtQaL~D~~Ti~e~~g~l~~~~i~~vGd~ 162 (306)
++||||++||++++++|+|++|+||++++.+.++++++++|||||+++.+||||+|+|+|||+|++|.++|++++|+||.
T Consensus 106 ~~kgEs~~Dt~~~ls~y~D~iv~R~~~~~~~~~~a~~~~vPvIN~~~~~~HPtQaL~Dl~Ti~e~~g~l~~~~i~~vgd~ 185 (359)
T 2w37_A 106 LGKKESTSDTAKVLGSMFDGIEFRGFKQSDAEILARDSGVPVWNGLTDEWHPTQMLADFMTVKENFGKLQGLTLTFMGDG 185 (359)
T ss_dssp TTTSSCHHHHHHHHHHHCSEEEEESSCHHHHHHHHHHSSSCEEEEECSSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCT
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCC
T ss_conf 77742288999986404644655155055699998614885665777745789999999999998396357559998688
Q ss_pred -CCCCCCHHHCCCCCCEEEEEECHHCCCCCCCCHHH----HHCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCHHHH
Q ss_conf -55543101001233125765200001321000024----3201332221366466306873322210000002201333
Q gi|255764473|r 163 -NNILHSLIEGAARFNYLLNIATPIGSEPRNEYLNW----ARNQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFKARE 237 (306)
Q Consensus 163 -~~v~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~~----~~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~~~~ 237 (306)
+||+||++.++++||+++++++|+++.|++..... +...|.++.+++|++|+++++|+||+++|++++++...+.
T Consensus 186 ~~~v~~S~~~~~~~~g~~v~~~~P~~~~p~~~~~~~~~~~~~~~g~~~~~~~d~~eal~~aDvIyt~~w~~~~~~~~~~~ 265 (359)
T 2w37_A 186 RNNVANSLLVTGAILGVNIHIVAPKALFPTEETQNIAKGFAEKSGAKLVITDDLDEGLKGSNVVYTDVWVSMGESNWEER 265 (359)
T ss_dssp TSHHHHHHHHHHHHHTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCSCCTTCTTHHHH
T ss_pred CCCCCCCHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHCCCCEEEECCEEECCCCCHHHH
T ss_conf 65715568999864699899957833488688999999999973986999789999974699999754763144346788
Q ss_pred HHCCCCCCCCHHHHHCC---CCCCEEECCCCCCCCC-----------------CCCHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf 10011123368899628---9872992599987487-----------------357679679971068687755999999
Q gi|255764473|r 238 EHVFQPFQVNLSLMSMA---HPDALFMHCLPAHRGE-----------------EVINEVLDGPQSVVFDEAENRLHTQKA 297 (306)
Q Consensus 238 ~~~~~~y~i~~~~l~~a---~~~~~vmHplP~~rg~-----------------EI~~~v~d~~~s~~~~Qa~Ngl~vr~A 297 (306)
..++.+||+|.++++++ +++++||||||++||. ||+++|+++|+|+||+||+||+|+|||
T Consensus 266 ~~~~~~y~v~~~~~~~~~~a~~~~i~MHpLP~~rg~~~~~~~~~~~~~~~~~~Eis~~V~d~p~s~i~~Qa~Ngl~vrmA 345 (359)
T 2w37_A 266 VKELTPYQVNMEAMKKTGTPDDQLIFMHCLPAFHNTDTQYGKEIKEKYGITEMEVTDEVFTSKYARQFEEAENRMHSIKA 345 (359)
T ss_dssp HHHHGGGCBCHHHHHTTCCCGGGCEEEECSCCCCSSCSHHHHHHHHHHCCCCCSBCHHHHTSTTBCHHHHHHHHHHHHHH
T ss_pred HHHHHCCEECHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHCCCCCCCEECHHHHCCCCCHHHHHHHHHHHHHHH
T ss_conf 98873516349999986389989499599988888543323001211377673765888478741599998703999999
Q ss_pred HHHHHHCCC
Q ss_conf 999962559
Q gi|255764473|r 298 ILLWCFGII 306 (306)
Q Consensus 298 iL~~~lG~~ 306 (306)
||+|+||-|
T Consensus 346 lL~~~lg~~ 354 (359)
T 2w37_A 346 MMAATLGNL 354 (359)
T ss_dssp HHHHHHSCC
T ss_pred HHHHHHCCC
T ss_conf 999996677
No 3
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=100.00 E-value=0 Score=643.18 Aligned_cols=303 Identities=26% Similarity=0.372 Sum_probs=286.3
Q ss_pred CC-CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCC-CCC
Q ss_conf 98-8877178445899999999999999996652366654437987999942888357899998986347543333-210
Q gi|255764473|r 2 MT-YPKHFADLSNISSSNLSCIIEVAKKIKNSSENIFENKPLSGKVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFL-SGS 79 (306)
Q Consensus 2 m~-~~k~~l~~~dl~~~~i~~ll~~A~~~k~~~~~~~~~~~l~gk~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~-~~~ 79 (306)
|+ .+||||+++||++++|..||++|.++|+.++++...++|+||+++++|+|||||||+|||+|+++|||+++++ ++.
T Consensus 1 m~~~~r~~L~i~dls~~ei~~ll~~A~~lk~~~~~~~~~~~l~gk~v~llF~~pStRTR~SFe~A~~~LGg~~i~~~~~~ 80 (308)
T 1ml4_A 1 MDWKGRDVISIRDFSKEDIETVLATAERLERELKEKGQLEYAKGKILATLFFEPSTRTRLSFESAMHRLGGAVIGFAEAS 80 (308)
T ss_dssp -CCTTCCBCCGGGCCHHHHHHHHHHHHHHHHHHHHHSSCCTTTTCEEEEEESSCCSHHHHHHHHHHHHTTCEEEEESCGG
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEECCCCC
T ss_conf 98999885650018999999999999999987760688776799889998348975378999999997599278667853
Q ss_pred CCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCCEECCCCC-CCHHHHHHHHHHHHHHHCCCCCCCCEEE
Q ss_conf 000123210799999753001011121013200677630124412404333-2024678765576642001336773046
Q gi|255764473|r 80 EMQLGRAETIGDTAKVLSRYVDAIVMRTTNHSRLLELTEYATVPVINALTD-NTHPCQIIADIMTFEEHRGSVKGKLFSW 158 (306)
Q Consensus 80 ~ss~~kgEsl~Dt~~~ls~~~D~iviR~~~~~~~~~~~~~~~vpvINa~~~-~~HPtQaL~D~~Ti~e~~g~l~~~~i~~ 158 (306)
.|+++||||++||++++|+|+|++|+|++++..+.++++++++||||||++ ++||||+|+|+|||+|++|.++|+||+|
T Consensus 81 ~~~~~~~Es~~Dta~vls~~~D~iviR~~~~~~~~~~a~~~~vPVINAg~~~~~HPtQ~L~Dl~Ti~e~~g~l~glki~~ 160 (308)
T 1ml4_A 81 TSSVKKGESLRDTIKTVEQYCDVIVIRHPKEGAARLAAEVAEVPVINAGDGSNQHPTQTLLDLYTIKKEFGRIDGLKIGL 160 (308)
T ss_dssp GSGGGGTCCHHHHHHHHTTTCSEEEEEESSTTHHHHHHHTCSSCEEEEEETTSCCHHHHHHHHHHHHHHSSCSSSEEEEE
T ss_pred CCCCCCCCCHHHHHHHHHCCCCEEEEEECHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEE
T ss_conf 12157875099999875314855999723000589987558976775777987680789986861756338835777986
Q ss_pred ECCC--CCCCCCHHHCCCCCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCHHH
Q ss_conf 1045--55543101001233125765200001321000024320133222136646630687332221000000220133
Q gi|255764473|r 159 SGDG--NNILHSLIEGAARFNYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFKAR 236 (306)
Q Consensus 159 vGd~--~~v~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~~~ 236 (306)
+||. +||+||++++++++|+++++++|+++.+++...+.++..+..+.+++|+++++.++|+||+++|++++.+...+
T Consensus 161 vGd~~~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~d~~ea~~~aDvv~~~~~~~~~~~~~~~ 240 (308)
T 1ml4_A 161 LGDLKYGRTVHSLAEALTFYDVELYLISPELLRMPRHIVEELREKGMKVVETTTLEDVIGKLDVLYVTRIQKERFPDEQE 240 (308)
T ss_dssp ESCTTTCHHHHHHHHHGGGSCEEEEEECCGGGCCCHHHHHHHHHTTCCEEEESCTHHHHTTCSEEEECCCCGGGSSSHHH
T ss_pred ECCCCCCHHHHHHHHHHHHCCCEEEEECCHHHCCCHHHHHHHHHCCCCEEECCCHHHHHCCCCEEECCEECCCCCCHHHH
T ss_conf 45876441288899999876983999796475487889999997198302128989963057522022002344525899
Q ss_pred HHHCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 3100111233688996289872992599987487357679679971068687755999999999962559
Q gi|255764473|r 237 EEHVFQPFQVNLSLMSMAHPDALFMHCLPAHRGEEVINEVLDGPQSVVFDEAENRLHTQKAILLWCFGII 306 (306)
Q Consensus 237 ~~~~~~~y~i~~~~l~~a~~~~~vmHplP~~rg~EI~~~v~d~~~s~~~~Qa~Ngl~vr~AiL~~~lG~~ 306 (306)
..+++.+||||.++|+.++++++|||||| ||+||+++|+|+|+|++|+||+||+|+|||||+|+||+|
T Consensus 241 ~~~~~~~~~v~~~~l~~a~~~~i~mHcLP--Rg~Ei~~~v~d~~~s~v~~QaeNrl~v~~AlL~~llG~i 308 (308)
T 1ml4_A 241 YLKVKGSYQVNLKVLEKAKDELRIMHPLP--RVDEIHPEVDNTKHAIYFRQVFNGVPVRMALLALVLGVI 308 (308)
T ss_dssp HHTTTTCCCBCTTGGGGSCTTCEEECCSC--CSSSBCGGGGGSTTBCHHHHHHTHHHHHHHHHHHHHTCC
T ss_pred HHHHHCCCCCCHHHHHHCCCCCEEECCCC--CCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99985066579999971699989969999--976124866578745799999721999999999986769
No 4
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis; 2.10A {Gloeobacter violaceus pcc 7421}
Probab=100.00 E-value=0 Score=640.81 Aligned_cols=298 Identities=44% Similarity=0.760 Sum_probs=279.3
Q ss_pred CCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 88877178445899999999999999996652366654437987999942888357899998986347543333210000
Q gi|255764473|r 3 TYPKHFADLSNISSSNLSCIIEVAKKIKNSSENIFENKPLSGKVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSGSEMQ 82 (306)
Q Consensus 3 ~~~k~~l~~~dl~~~~i~~ll~~A~~~k~~~~~~~~~~~l~gk~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~~ss 82 (306)
.++||||+++||++++|..||++|.++|+.+ ....|+||+++++|||||||||+|||+|+++|||+++++++.+||
T Consensus 11 ~~~k~ll~i~dls~~ei~~ll~~A~~lk~~~----~~~~L~gK~v~llF~epSTRTR~SFe~A~~~LGg~vi~~~~~~ss 86 (323)
T 3gd5_A 11 RFRPDLLSLDDLDEAQLHALLTLAHQLKRGE----RVANLHGKVLGLVFLKASTRTRVSFTVAMYQLGGQVIDLSPSNTQ 86 (323)
T ss_dssp CCCSCBSSGGGSCHHHHHHHHHHHHHHHHTS----SCCCCTTCEEEEEESSCCHHHHHHHHHHHHHTTCEEEEC------
T ss_pred CCCCCCCCHHHCCHHHHHHHHHHHHHHHCCC----CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEECCCCCCC
T ss_conf 6688874222189999999999999987367----677789998999966897116999999999859919963542244
Q ss_pred CCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCC
Q ss_conf 12321079999975300101112101320067763012441240433320246787655766420013367730461045
Q gi|255764473|r 83 LGRAETIGDTAKVLSRYVDAIVMRTTNHSRLLELTEYATVPVINALTDNTHPCQIIADIMTFEEHRGSVKGKLFSWSGDG 162 (306)
Q Consensus 83 ~~kgEsl~Dt~~~ls~~~D~iviR~~~~~~~~~~~~~~~vpvINa~~~~~HPtQaL~D~~Ti~e~~g~l~~~~i~~vGd~ 162 (306)
+.||||++||++++++|+|++|+||+.++.+.++++++++||||||++++||||+|+|+|||+|++|.++|++|+|+||+
T Consensus 87 ~~kgEs~~Dt~~~ls~~~d~iv~R~~~~~~~~~~a~~s~vPVINag~~~~HPtQaLlDl~Ti~e~~g~l~gl~i~~vGd~ 166 (323)
T 3gd5_A 87 VGRGEPVRDTARVLGRYVDGLAIRTFAQTELEEYAHYAGIPVINALTDHEHPCQVVADLLTIRENFGRLAGLKLAYVGDG 166 (323)
T ss_dssp ----CCHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHCSCEEEEECSSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCC
T ss_pred CCCCCCHHHHHHHHHCCCHHHHEECCHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCC
T ss_conf 57763037799998522114321000056799985217977685888741689999889999998587468879997886
Q ss_pred CCCCCCHHHCCCCCCEEEEEECHHCCCCCCCCHHHH----HCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCHHH-H
Q ss_conf 555431010012331257652000013210000243----20133222136646630687332221000000220133-3
Q gi|255764473|r 163 NNILHSLIEGAARFNYLLNIATPIGSEPRNEYLNWA----RNQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFKAR-E 237 (306)
Q Consensus 163 ~~v~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~~~----~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~~~-~ 237 (306)
+||+||++.+++++|+.+.+++|+++.+.+...... ...|.++.+++|+.++++++|+||+++|++++.+.... .
T Consensus 167 ~~v~~S~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~ea~~~aDviyt~~~~~~~~~~~~~~~ 246 (323)
T 3gd5_A 167 NNVAHSLLLGCAKVGMSIAVATPEGFTPDPAVSARASEIAGRTGAEVQILRDPFEAARGAHILYTDVWTSMGQEAETQHR 246 (323)
T ss_dssp CHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCCC---------CC
T ss_pred CCCCCCHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEECCCHHHHHCCCCEEEEEHHHHHCCCHHHHHH
T ss_conf 55345599998646980899738766887899999999876338810002789999557987663113231010334568
Q ss_pred HHCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 1001112336889962898729925999874873576796799710686877559999999999625
Q gi|255764473|r 238 EHVFQPFQVNLSLMSMAHPDALFMHCLPAHRGEEVINEVLDGPQSVVFDEAENRLHTQKAILLWCFG 304 (306)
Q Consensus 238 ~~~~~~y~i~~~~l~~a~~~~~vmHplP~~rg~EI~~~v~d~~~s~~~~Qa~Ngl~vr~AiL~~~lG 304 (306)
.+++.+||||.++|++++++++||||||+|||+||+++|+|+|+|+||+||+||+|+|||||+|+||
T Consensus 247 ~~~~~~y~vt~~~l~~a~~~~i~MHplP~~Rg~EI~~~V~d~~~s~~~~Qa~Ngl~vr~AlL~~llg 313 (323)
T 3gd5_A 247 LQLFEQYQINAALLNCAAAEAIVLHCLPAHRGEEITDEVMEGPRSRIWDEAENRLHAQKAVLAALMG 313 (323)
T ss_dssp HHHHTTCCBCHHHHHTSCTTCEEEECSCCCBTTTBCHHHHHSTTBCHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHCCCCCHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 8764000252999953798989989899988853487886599867999997119999999999977
No 5
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=100.00 E-value=0 Score=636.18 Aligned_cols=302 Identities=38% Similarity=0.623 Sum_probs=280.3
Q ss_pred CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 88771784458999999999999999966523666544379879999428883578999989863475433332100001
Q gi|255764473|r 4 YPKHFADLSNISSSNLSCIIEVAKKIKNSSENIFENKPLSGKVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSGSEMQL 83 (306)
Q Consensus 4 ~~k~~l~~~dl~~~~i~~ll~~A~~~k~~~~~~~~~~~l~gk~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~~ss~ 83 (306)
++||||+++||++++|+.||++|.++|..+.+.....+|+||+++++|+|||||||+|||+|+++|||+++++++.+||+
T Consensus 4 ~~khlL~i~dls~~ei~~ll~~A~~lk~~~~~~~~~~~L~gk~v~~lF~epSTRTR~SFe~A~~~LGg~~i~l~~~~ss~ 83 (333)
T 1duv_G 4 YHKHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEAKLTGKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPSGSQI 83 (333)
T ss_dssp TTCCBSCGGGSCHHHHHHHHHHHHHHHHHHHTTCCCCSCTTCEEEEEESSCCSHHHHHHHHHHHHTTCEEEEECSSSSCB
T ss_pred CCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCEEEECCCCCCCC
T ss_conf 98781660018999999999999999855645886655799989999658972359999999997798187558100113
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCC--CCCCEEEECC
Q ss_conf 23210799999753001011121013200677630124412404333202467876557664200133--6773046104
Q gi|255764473|r 84 GRAETIGDTAKVLSRYVDAIVMRTTNHSRLLELTEYATVPVINALTDNTHPCQIIADIMTFEEHRGSV--KGKLFSWSGD 161 (306)
Q Consensus 84 ~kgEsl~Dt~~~ls~~~D~iviR~~~~~~~~~~~~~~~vpvINa~~~~~HPtQaL~D~~Ti~e~~g~l--~~~~i~~vGd 161 (306)
+||||++||+++||+|+|+||+||++++.+.++++++++|||||+++++||||+|+|+|||+|++|.. .+++++|+||
T Consensus 84 ~kgEsl~Dt~~~ls~y~D~iv~R~~~~~~~~~~a~~~~vPVIN~~~~~~HPtQaL~Dl~Ti~e~~~~~~~~~~~i~~~~~ 163 (333)
T 1duv_G 84 GHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAEYASVPVWNGLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGD 163 (333)
T ss_dssp TTTBCHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHSSCEEESCCSSCCHHHHHHHHHHHHHHSTTCCGGGCEEEEESC
T ss_pred CCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCC
T ss_conf 56630577998865048679983543667999997578888979999877479999899999997324455505886176
Q ss_pred C-CCCCCCHHHCCCCCCEEEEEECHHCCCCCCCCHHH----HHCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCH--
Q ss_conf 5-55543101001233125765200001321000024----3201332221366466306873322210000002201--
Q gi|255764473|r 162 G-NNILHSLIEGAARFNYLLNIATPIGSEPRNEYLNW----ARNQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFK-- 234 (306)
Q Consensus 162 ~-~~v~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~~----~~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~-- 234 (306)
. +||+||++.++.++|+++++++|+++.|+...... +...|..+.+++|++++++++|+||+++|++++.+..
T Consensus 164 ~~~~v~~s~~~~~~~~g~~v~~~~P~~~~p~~~~~~~~~~~~~~~g~~i~~~~d~~ea~~~aDvvyt~~~~~~~~~~~~~ 243 (333)
T 1duv_G 164 ARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDVWVSMGEAKEKW 243 (333)
T ss_dssp TTSHHHHHHHHHHHHHCCEEEEECCGGGCCCHHHHHHHHHHHHHTTCEEEEESCHHHHHTTCSEEEECCSSCTTSCTTHH
T ss_pred CCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHCCCEEEEEEEEECHHHHHHH
T ss_conf 54320125888887639717996376558767899999999876298679863899996169830034678502222235
Q ss_pred HHHHHCCCCCCCCHHHHHC-CCCCCEEECCCC------------------CCCCCCCCHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf 3331001112336889962-898729925999------------------874873576796799710686877559999
Q gi|255764473|r 235 AREEHVFQPFQVNLSLMSM-AHPDALFMHCLP------------------AHRGEEVINEVLDGPQSVVFDEAENRLHTQ 295 (306)
Q Consensus 235 ~~~~~~~~~y~i~~~~l~~-a~~~~~vmHplP------------------~~rg~EI~~~v~d~~~s~~~~Qa~Ngl~vr 295 (306)
.+..+++.+||||.++|+. ++++++|||||| +|||+||+++|+|+|+|+||+||+||+|+|
T Consensus 244 ~~~~~~~~~y~v~~~~l~~~~~~~~i~MHpLP~~~~~~~~~~~~~~~~~pv~rg~EI~~~V~d~~~s~i~~Qa~Ngl~vr 323 (333)
T 1duv_G 244 AERIALLREYQVNSKMMQLTGNPEVKFLHCLPAFHDDQTTLGKKMAEEFGLHGGMEVTDEVFESAASIVFDQAENRMHTI 323 (333)
T ss_dssp HHHHHHHGGGCBCHHHHHTTCCTTCEEEECSCCCCSSCSHHHHHHHHHTTCCSBSSBBHHHHTSTTBCHHHHHHHHHHHH
T ss_pred HHHHHHHCCCEECHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHCCCCCCCCCCEECHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 66666511637879999864799949959998775101122310103468878758658885787558999987129999
Q ss_pred HHHHHHHHCC
Q ss_conf 9999996255
Q gi|255764473|r 296 KAILLWCFGI 305 (306)
Q Consensus 296 ~AiL~~~lG~ 305 (306)
||||+|+||-
T Consensus 324 ~AlL~~~l~k 333 (333)
T 1duv_G 324 KAVMVATLSK 333 (333)
T ss_dssp HHHHHHHHCC
T ss_pred HHHHHHHHCC
T ss_conf 9999998577
No 6
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, JCSG, protein structure initiative, PSI; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=100.00 E-value=0 Score=635.58 Aligned_cols=299 Identities=39% Similarity=0.649 Sum_probs=280.4
Q ss_pred CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 87717844589999999999999999665236665443798799994288835789999898634754333321000012
Q gi|255764473|r 5 PKHFADLSNISSSNLSCIIEVAKKIKNSSENIFENKPLSGKVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSGSEMQLG 84 (306)
Q Consensus 5 ~k~~l~~~dl~~~~i~~ll~~A~~~k~~~~~~~~~~~l~gk~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~~ss~~ 84 (306)
+||||+++||++++|..||++|.++|..+.+....+.|+||+++++|+|||||||+|||+|+++|||+++++++.+||++
T Consensus 19 gk~llsi~dls~~ei~~ll~~A~~lk~~~~~~~~~~~L~gk~v~~lF~epSTRTR~SFe~A~~~LGg~~i~~~~~~ss~~ 98 (325)
T 1vlv_A 19 GRSLLTLLDFSPEEIRYLLDISKQVKMENRSKLRTERFKGMTLAMIFEKRSTRTRLAFETAFAEEGGHPIFLSPNDIHLG 98 (325)
T ss_dssp TCCBSCGGGSCHHHHHHHHHHHHHHHHHHHHTCCCCTTTTCEEEEEESSCCHHHHHHHHHHHHHTTCEEEEECTTTCCTT
T ss_pred CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCC
T ss_conf 99808511089999999999999997642247776457998899985689753789999999983985897466433567
Q ss_pred CCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCC-C
Q ss_conf 321079999975300101112101320067763012441240433320246787655766420013367730461045-5
Q gi|255764473|r 85 RAETIGDTAKVLSRYVDAIVMRTTNHSRLLELTEYATVPVINALTDNTHPCQIIADIMTFEEHRGSVKGKLFSWSGDG-N 163 (306)
Q Consensus 85 kgEsl~Dt~~~ls~~~D~iviR~~~~~~~~~~~~~~~vpvINa~~~~~HPtQaL~D~~Ti~e~~g~l~~~~i~~vGd~-~ 163 (306)
||||++||++++++|+|++|+||+.++.+.++++++++|||||+++++||||+|+|+|||+|++|.++|++|+|+||. +
T Consensus 99 kgEsl~Dt~~~ls~y~D~ivvR~~~~~~~~~~a~~~~vPVINa~~~~~HPtQaLlDl~Ti~e~~g~l~gl~i~~vGd~~~ 178 (325)
T 1vlv_A 99 AKESLEDTARVLGRMVDAIMFRGYKQETVEKLAEYSGVPVYNGLTDEFHPTQALADLMTIEENFGRLKGVKVVFMGDTRN 178 (325)
T ss_dssp TSSCHHHHHHHHHTTCSEEEEESSCHHHHHHHHHHHCSCEEESCCSSCCHHHHHHHHHHHHHHHSCSTTCEEEEESCTTS
T ss_pred CCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCC
T ss_conf 88536899999985165157740442046666650676414178887778999999999999839745677257668755
Q ss_pred CCCCCHHHCCCCCCEEEEEECHHCCCCCCCCHHHH----HCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCHH-HHH
Q ss_conf 55431010012331257652000013210000243----2013322213664663068733222100000022013-331
Q gi|255764473|r 164 NILHSLIEGAARFNYLLNIATPIGSEPRNEYLNWA----RNQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFKA-REE 238 (306)
Q Consensus 164 ~v~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~~~----~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~~-~~~ 238 (306)
++++|++.+++++|+++.+++|+++.|++...... ...+..+.+++++.++++++|+||+++|++++++... ...
T Consensus 179 ~~~~s~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~aDvvyt~~~~~~~~~~~~~~~~ 258 (325)
T 1vlv_A 179 NVATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTSNLEEALAGADVVYTDVWASMGEEDKEKERM 258 (325)
T ss_dssp HHHHHHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEESCHHHHHTTCSEEEECCCC----------CH
T ss_pred CEEEHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEECCHHHHHCCCCEEEEHHHHHHHHHHHHHHHH
T ss_conf 37531999999759849997384338888999987655442376420106999997069866401666754546668998
Q ss_pred HCCCCCCCCHHHHHC-CCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 001112336889962-89872992599987487357679679971068687755999999999962
Q gi|255764473|r 239 HVFQPFQVNLSLMSM-AHPDALFMHCLPAHRGEEVINEVLDGPQSVVFDEAENRLHTQKAILLWCF 303 (306)
Q Consensus 239 ~~~~~y~i~~~~l~~-a~~~~~vmHplP~~rg~EI~~~v~d~~~s~~~~Qa~Ngl~vr~AiL~~~l 303 (306)
.++++||||.++|+. +|++++||||||+|||.||+++|+++|+|+||+||+||+|+|||||+++|
T Consensus 259 ~~~~~y~v~~~~l~~~ak~~~i~mHplP~~Rg~EI~~~V~d~~~s~i~~Qa~Ngl~vr~AlL~~lL 324 (325)
T 1vlv_A 259 ALLKPYQVNERVMEMTGKSETIFMHCLPAVKGQEVTYEVIEGKQSRVWDEAENRKHTIKAVMIATL 324 (325)
T ss_dssp HHHGGGCBCHHHHHTTCCTTCEEEECSCCCBTTTBCHHHHTSTTBCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHCCCCEECHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 760375056999972189998996998489984828878569987399998725999999999986
No 7
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=100.00 E-value=0 Score=632.46 Aligned_cols=301 Identities=40% Similarity=0.604 Sum_probs=281.1
Q ss_pred CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 88771784458999999999999999966523-66654437987999942888357899998986347543333210000
Q gi|255764473|r 4 YPKHFADLSNISSSNLSCIIEVAKKIKNSSEN-IFENKPLSGKVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSGSEMQ 82 (306)
Q Consensus 4 ~~k~~l~~~dl~~~~i~~ll~~A~~~k~~~~~-~~~~~~l~gk~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~~ss 82 (306)
.+||||+++||+++++..||++|.++|..+++ ....+.|+||+++++|+|||||||+|||+|+++|||+++++++.+||
T Consensus 5 ~~k~lLsi~dls~~ei~~ll~~A~~~k~~~~~~~~~~~~L~gk~v~~lF~epSTRTR~SFe~A~~~LGg~~i~l~~~~ss 84 (321)
T 1oth_A 5 KGRDLLTLKNFTGEEIKYMLWLSADLKFRIKQKGEYLPLLQGKSLGMIFEKRSTRTRLSTETGFALLGGHPCFLTTQDIH 84 (321)
T ss_dssp TTCCBSCGGGSCHHHHHHHHHHHHHHHHHHHTTCCCCCTTTTCEEEEEESSCCSHHHHHHHHHHHHTTCEEEEEETTTSC
T ss_pred CCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEECCCCCCC
T ss_conf 99992870008999999999999999988752787674469988999866897554999999999779977956742134
Q ss_pred CCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCC
Q ss_conf 12321079999975300101112101320067763012441240433320246787655766420013367730461045
Q gi|255764473|r 83 LGRAETIGDTAKVLSRYVDAIVMRTTNHSRLLELTEYATVPVINALTDNTHPCQIIADIMTFEEHRGSVKGKLFSWSGDG 162 (306)
Q Consensus 83 ~~kgEsl~Dt~~~ls~~~D~iviR~~~~~~~~~~~~~~~vpvINa~~~~~HPtQaL~D~~Ti~e~~g~l~~~~i~~vGd~ 162 (306)
++||||++||++++++|+|++|+|+++++.+.++++++++|||||+++++||||||+|+|||+|++|.++|++|+||||+
T Consensus 85 ~~kgEsl~Dt~~~ls~~~d~ivvR~~~~~~~~~~~~~~~vpVing~~~~~HPtQaL~Dl~Ti~e~~g~l~gl~i~~vGD~ 164 (321)
T 1oth_A 85 LGVNESLTDTARVLSSMADAVLARVYKQSDLDTLAKEASIPIINGLSDLYHPIQILADYLTLQEHYSSLKGLTLSWIGDG 164 (321)
T ss_dssp BTTTBCHHHHHHHHHHHCSEEEEECSCHHHHHHHHHHCSSCEEESCCSSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCS
T ss_pred CCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCC
T ss_conf 67640289999999861651588730230088886405787564788654688999999999998688778779997687
Q ss_pred CCCCCCHHHCCCCCCEEEEEECHHCCCCCCCCHHH----HHCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCHH-HH
Q ss_conf 55543101001233125765200001321000024----32013322213664663068733222100000022013-33
Q gi|255764473|r 163 NNILHSLIEGAARFNYLLNIATPIGSEPRNEYLNW----ARNQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFKA-RE 237 (306)
Q Consensus 163 ~~v~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~~----~~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~~-~~ 237 (306)
+||+||++.+++++|+++.+++|+++.|++...+. +...|.++.+++|+.+++.++|+||+++|.+++.+... ..
T Consensus 165 ~~v~~S~~~~~~~~g~~~~~~~P~~~~p~~~~~~~~~~~~~~~~~~~~~~~d~~ea~~~~d~v~~~~~~~~~~~~~~~~~ 244 (321)
T 1oth_A 165 NNILHSIMMSAAKFGMHLQAATPKGYEPDASVTKLAEQYAKENGTKLLLTNDPLEAAHGGNVLITDTWISMGREEEKKKR 244 (321)
T ss_dssp SHHHHHHHTTTGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCSSCTTCGGGHHHH
T ss_pred CCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHCCCCEEEEEEEEECHHHHHHHHH
T ss_conf 66356999998750884799845776875899999999999649989997388998506887999866731155557888
Q ss_pred HHCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 10011123368899628987299259998748735767967997106868775599999999996255
Q gi|255764473|r 238 EHVFQPFQVNLSLMSMAHPDALFMHCLPAHRGEEVINEVLDGPQSVVFDEAENRLHTQKAILLWCFGI 305 (306)
Q Consensus 238 ~~~~~~y~i~~~~l~~a~~~~~vmHplP~~rg~EI~~~v~d~~~s~~~~Qa~Ngl~vr~AiL~~~lG~ 305 (306)
.+++..||+|.++|+.++++++|||||| |||+||+++|+++|+|+||+||+||+|+|||||+++||.
T Consensus 245 ~~~~~~y~i~~~~l~~~~~~~i~mHplP-~rg~EI~~~V~~~~~s~i~~Qa~Ngl~vrmAlL~~lL~~ 311 (321)
T 1oth_A 245 LQAFQGYQVTMKTAKVAASDWTFLHCLP-RKPEEVDDEVFYSPRSLVFPEAENRKWTIMAVMVSLLTD 311 (321)
T ss_dssp HHHTTTCCBCHHHHHTSCTTCEEEECSC-CCTTTBCHHHHTSTTBCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHCCCCCCEEECCCC-CCCCCCCHHHHCCCCCHHHHHHHCHHHHHHHHHHHHHCC
T ss_conf 8888888888999955799989979999-999820888857998779999864099999999998657
No 8
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=100.00 E-value=0 Score=631.48 Aligned_cols=299 Identities=45% Similarity=0.722 Sum_probs=279.1
Q ss_pred CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 88771784458999999999999999966523666544379879999428883578999989863475433332100001
Q gi|255764473|r 4 YPKHFADLSNISSSNLSCIIEVAKKIKNSSENIFENKPLSGKVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSGSEMQL 83 (306)
Q Consensus 4 ~~k~~l~~~dl~~~~i~~ll~~A~~~k~~~~~~~~~~~l~gk~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~~ss~ 83 (306)
.|||||+++||++++|..||++|.++|+.+.+. ...++||+++++|+|||||||+|||+|+++|||++++++.++||.
T Consensus 1 ~mkh~l~i~dls~~ei~~ll~~A~~lk~~~~~~--~~~l~~k~v~llF~epSTRTR~SFe~A~~~LGg~~i~~~~~~ss~ 78 (307)
T 2i6u_A 1 VIRHFLRDDDLSPAEQAEVLELAAELKKDPVSR--RPLQGPRGVAVIFDKNSTRTRFSFELGIAQLGGHAVVVDSGSTQL 78 (307)
T ss_dssp CCCCBSSGGGSCHHHHHHHHHHHHHHHHSTTSC--CTTTTTCEEEEEESSCCSHHHHHHHHHHHHTTCEEEEEEGGGSGG
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC--CCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCEEEECCCCCCCC
T ss_conf 973569810099999999999999986274346--744679779999679975439999999998699185177543567
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCC-
Q ss_conf 2321079999975300101112101320067763012441240433320246787655766420013367730461045-
Q gi|255764473|r 84 GRAETIGDTAKVLSRYVDAIVMRTTNHSRLLELTEYATVPVINALTDNTHPCQIIADIMTFEEHRGSVKGKLFSWSGDG- 162 (306)
Q Consensus 84 ~kgEsl~Dt~~~ls~~~D~iviR~~~~~~~~~~~~~~~vpvINa~~~~~HPtQaL~D~~Ti~e~~g~l~~~~i~~vGd~- 162 (306)
+||||++||++++++|+|++|+||++++.+.++++++++||||||++++||||||+|+|||+|++|.++|++|+||||.
T Consensus 79 ~kgEs~~Dt~~~l~~~~d~iv~R~~~~~~~~~~a~~~~vPVINag~~~~HPtQaLlDl~Ti~e~~g~l~gl~i~~vGd~~ 158 (307)
T 2i6u_A 79 GRDETLQDTAKVLSRYVDAIVWRTFGQERLDAMASVATVPVINALSDEFHPCQVLADLQTIAERKGALRGLRLSYFGDGA 158 (307)
T ss_dssp GGTCCHHHHHHHHHHHEEEEEEECSSHHHHHHHHHHCSSCEEESCCSSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCTT
T ss_pred CCCCCHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCC
T ss_conf 88985999999974422201341023456999987278764647998877689999999999985897898899977888
Q ss_pred CCCCCCHHHCCCCCCEEEEEECHHCCCCCCCCHHHHH----CCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCHH-HH
Q ss_conf 5554310100123312576520000132100002432----013322213664663068733222100000022013-33
Q gi|255764473|r 163 NNILHSLIEGAARFNYLLNIATPIGSEPRNEYLNWAR----NQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFKA-RE 237 (306)
Q Consensus 163 ~~v~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~~~~----~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~~-~~ 237 (306)
++++||++.++.++|+++.+++|+++.|++.....++ ..|.++.++++++++++++|+||+++|++++.+... ..
T Consensus 159 ~~~~~s~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDvv~~~~~~~~~~~~~~~~~ 238 (307)
T 2i6u_A 159 NNMAHSLLLGGVTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTADAHAAAAGADVLVTDTWTSMGQENDGLDR 238 (307)
T ss_dssp SHHHHHHHHHHHHTTCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCSSCTTCTTSCCCS
T ss_pred CCHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCHHHHHCCCCEEEEEEEEEECCCCCCHHH
T ss_conf 77150799999866985872587234888899999998888618851896468888648988997521530132332011
Q ss_pred HHCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 1001112336889962898729925999874873576796799710686877559999999999625
Q gi|255764473|r 238 EHVFQPFQVNLSLMSMAHPDALFMHCLPAHRGEEVINEVLDGPQSVVFDEAENRLHTQKAILLWCFG 304 (306)
Q Consensus 238 ~~~~~~y~i~~~~l~~a~~~~~vmHplP~~rg~EI~~~v~d~~~s~~~~Qa~Ngl~vr~AiL~~~lG 304 (306)
.+++.+||+|.++|+.++++++||||||+|||+||+++|+++|+|+||+||+||+|+|||||+|+|+
T Consensus 239 ~~~~~~~~l~~~~l~~a~~~~ivmHplP~~R~~Ei~~~v~~~~~s~~~~Qa~ngl~vrmAlL~~ll~ 305 (307)
T 2i6u_A 239 VKPFRPFQLNSRLLALADSDAIVLHCLPAHRGDEITDAVMDGPASAVWDEAENRLHAQKALLVWLLE 305 (307)
T ss_dssp SGGGGGGCBCHHHHHHSCTTCEEEECSCCCBTTTBCHHHHTSTTBCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEECHHHHHCCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHCHHHHHHHHHHHHHH
T ss_conf 2446625666999951798969989899867876686785699657999987629999999999982
No 9
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=100.00 E-value=0 Score=627.77 Aligned_cols=303 Identities=37% Similarity=0.589 Sum_probs=279.1
Q ss_pred CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 88771784458999999999999999966523666544379879999428883578999989863475433332100001
Q gi|255764473|r 4 YPKHFADLSNISSSNLSCIIEVAKKIKNSSENIFENKPLSGKVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSGSEMQL 83 (306)
Q Consensus 4 ~~k~~l~~~dl~~~~i~~ll~~A~~~k~~~~~~~~~~~l~gk~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~~ss~ 83 (306)
++||||+++||++++|..||++|.++|+.+.++...+.|+||+++++|+|||||||+|||+|+++|||+++++++.+||+
T Consensus 5 ~~k~llsi~dls~~ei~~ll~~A~~lk~~~~~~~~~~~L~gk~v~~lF~epSTRTR~SFe~A~~~LGg~~i~~~~~~ss~ 84 (335)
T 1dxh_A 5 HNRNLLSLMHHSTRELRYLLDLSRDLKRAKYTGTEQQHLKRKNIALIFEKTSTRTRCAFEVAAYDQGANVTYIDPNSSQI 84 (335)
T ss_dssp TTCCBSSSTTCCHHHHHHHHHHHHHHHHHHHHTCCCCCCTTCEEEEEESSCCHHHHHHHHHHHHHTTCEEEEECTTTCCB
T ss_pred CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEECCCCCCCC
T ss_conf 99895770129999999999999999866645887655799989999568970179999999998599099788533435
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEE-EECC-
Q ss_conf 23210799999753001011121013200677630124412404333202467876557664200133677304-6104-
Q gi|255764473|r 84 GRAETIGDTAKVLSRYVDAIVMRTTNHSRLLELTEYATVPVINALTDNTHPCQIIADIMTFEEHRGSVKGKLFS-WSGD- 161 (306)
Q Consensus 84 ~kgEsl~Dt~~~ls~~~D~iviR~~~~~~~~~~~~~~~vpvINa~~~~~HPtQaL~D~~Ti~e~~g~l~~~~i~-~vGd- 161 (306)
+||||++||++++|+|+|++|+||++++.+.++++++++|||||+++++||||+|+|+|||+|++|.+.+.+++ |+|+
T Consensus 85 ~kgEsl~Dt~~~ls~y~D~iviR~~~~~~~~~~a~~~~vPVIN~~~~~~HPtQaLlDl~Ti~e~~g~~~~~~~~~~~~~~ 164 (335)
T 1dxh_A 85 GHKESMKDTARVLGRMYDAIEYRGFKQEIVEELAKFAGVPVFNGLTDEYHPTQMLADVLTMREHSDKPLHDISYAYLGDA 164 (335)
T ss_dssp TTTBCHHHHHHHHHHHCSEEEEECSCHHHHHHHHHHSSSCEEEEECSSCCHHHHHHHHHHHHHTCSSCGGGCEEEEESCC
T ss_pred CCCCCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCC
T ss_conf 66745889999876225603554105777999864147866626998755569999999999861744368579985688
Q ss_pred CCCCCCCHHHCCCCCCEEEEEECHHCCCCCCCCHHHHH----CCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCHH--
Q ss_conf 55554310100123312576520000132100002432----013322213664663068733222100000022013--
Q gi|255764473|r 162 GNNILHSLIEGAARFNYLLNIATPIGSEPRNEYLNWAR----NQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFKA-- 235 (306)
Q Consensus 162 ~~~v~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~~~~----~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~~-- 235 (306)
++||+||++.++++||+++++++|+++.|+++....++ ..|.++++++|+.++++++|+||+++|++++.+.+.
T Consensus 165 ~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~~ea~~~aDvv~t~~~~~~~~~~~~~~ 244 (335)
T 1dxh_A 165 RNNMGNSLLLIGAKLGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTEDPKEAVKGVDFVHTDVWVSMGEPVEAWG 244 (335)
T ss_dssp SSHHHHHHHHHHHHTTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECCCSCSSSCGGGCH
T ss_pred CCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHCCCCEEEEEEEEECCCHHHHHH
T ss_conf 76514799999997798699966854578789999999999974998999849999836798898777775242133346
Q ss_pred HHHHCCCCCCCCHHHHH-CCCCCCEEECCCCC-------------------CCCCCCCHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf 33100111233688996-28987299259998-------------------74873576796799710686877559999
Q gi|255764473|r 236 REEHVFQPFQVNLSLMS-MAHPDALFMHCLPA-------------------HRGEEVINEVLDGPQSVVFDEAENRLHTQ 295 (306)
Q Consensus 236 ~~~~~~~~y~i~~~~l~-~a~~~~~vmHplP~-------------------~rg~EI~~~v~d~~~s~~~~Qa~Ngl~vr 295 (306)
+..+++.+||||.++++ .++++++||||||+ +||+||+++|+|+|+|+||+||+||+|+|
T Consensus 245 ~~~~~~~~~~v~~e~l~~~a~~~~i~mH~lP~~~~~~~~~~~~~~~~~p~~~rg~Ei~~~v~d~p~s~i~~Qa~Ng~~vr 324 (335)
T 1dxh_A 245 ERIKELLPYQVNMEIMKATGNPRAKFMHCLPAFHNSETKVGKQIAEQYPNLANGIEVTEDVFESPYNIAFEQAENRMHTI 324 (335)
T ss_dssp HHHHHHGGGCBCHHHHHTTCCSSCEEEECSCCCCSSSSHHHHHHHHHCGGGGGBSSBBHHHHTSTTBCHHHHHHHHHHHH
T ss_pred HHHHHHCCCEECHHHHHHCCCCCEEEECCCCCCCCHHHCCCCHHHHHCCCCCCCCEECHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 77765212233399998517999599689977641121024301331788887718658895799757999997349999
Q ss_pred HHHHHHHHCCC
Q ss_conf 99999962559
Q gi|255764473|r 296 KAILLWCFGII 306 (306)
Q Consensus 296 ~AiL~~~lG~~ 306 (306)
||||+++||-|
T Consensus 325 mAiL~~llg~~ 335 (335)
T 1dxh_A 325 KAILVSTLADI 335 (335)
T ss_dssp HHHHHHHHSCC
T ss_pred HHHHHHHHCCC
T ss_conf 99999986159
No 10
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.00A {Thermus thermophilus HB8}
Probab=100.00 E-value=0 Score=628.59 Aligned_cols=295 Identities=43% Similarity=0.725 Sum_probs=274.2
Q ss_pred CCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 99888771784458999999999999999966523666544379879999428883578999989863475433332100
Q gi|255764473|r 1 MMTYPKHFADLSNISSSNLSCIIEVAKKIKNSSENIFENKPLSGKVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSGSE 80 (306)
Q Consensus 1 ~m~~~k~~l~~~dl~~~~i~~ll~~A~~~k~~~~~~~~~~~l~gk~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~~ 80 (306)
.|+++||||+++||++++|+.||++|.++|+.+.. .++|+||+++++|+|||||||+|||+|+++|||++++++..+
T Consensus 5 ~~~m~k~ll~i~dls~~~i~~ll~~A~~lk~~~~~---~~~L~gk~v~llF~epSTRTR~SFe~A~~~LGg~~i~~~~~~ 81 (301)
T 2ef0_A 5 ALTLPKDLLDFSGYGPKELQALLDLAEQLKRERYR---GEDLKGKVLALLFEKPSLRTRTTLEVAMVHLGGHAVYLDQKQ 81 (301)
T ss_dssp --CCCSCBSSSTTCCHHHHHHHHHHHHHHHHHTCC---CCTTTTCEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEEGGG
T ss_pred CCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCC---CCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEECCCCC
T ss_conf 56877464862229999999999999998746335---775799889998547873069999999996799889756433
Q ss_pred CCCCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEC
Q ss_conf 00123210799999753001011121013200677630124412404333202467876557664200133677304610
Q gi|255764473|r 81 MQLGRAETIGDTAKVLSRYVDAIVMRTTNHSRLLELTEYATVPVINALTDNTHPCQIIADIMTFEEHRGSVKGKLFSWSG 160 (306)
Q Consensus 81 ss~~kgEsl~Dt~~~ls~~~D~iviR~~~~~~~~~~~~~~~vpvINa~~~~~HPtQaL~D~~Ti~e~~g~l~~~~i~~vG 160 (306)
||++||||++||+++++.|+|++|+||+.++.+.++++++++||||||++++||||+|+|+|||+|++|.++|++|+|+|
T Consensus 82 ss~~kgEs~~Dt~~~l~~~~d~iviR~~~~~~~~~~a~~s~vpVINa~~~~~HPtQaLlDl~Ti~e~~g~~~~l~i~~vG 161 (301)
T 2ef0_A 82 VGIGEREPVRDVAKNLERFVEGIAARVFRHETVEALARHAKVPVVNALSDRAHPLQALADLLTLKEVFGGLAGLEVAWVG 161 (301)
T ss_dssp SCTTTCCCHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHCSSCEEEEECSSCCHHHHHHHHHHHHHHHSCCTTCEEEEES
T ss_pred CCCCCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEC
T ss_conf 34454451999999865126740079834000999998678987838887525989998899999986875687059863
Q ss_pred CCCCCCCCHHHCCCCCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCH-HHHHH
Q ss_conf 45555431010012331257652000013210000243201332221366466306873322210000002201-33310
Q gi|255764473|r 161 DGNNILHSLIEGAARFNYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFK-AREEH 239 (306)
Q Consensus 161 d~~~v~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~-~~~~~ 239 (306)
|++||.||++.++..+|+.+.+++|.++.+++...... ....++|+++++.++|+||+|+|++++.+.+ ....+
T Consensus 162 d~~~v~~s~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~-----~~~~~~d~~e~~~~ad~v~~d~~~~~~~~~e~~~~~~ 236 (301)
T 2ef0_A 162 DGNNVLNSLLEVAPLAGLKVRVATPKGYEPDPGLLKRA-----NAFFTHDPKEAALGAHALYTDVWTSMGQEAEREKRLR 236 (301)
T ss_dssp CCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHH-----TCEEESCHHHHHTTCSEEEECCCC--------CHHHH
T ss_pred CCCCCHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHC-----CCCEECCHHHHHCCCCEEEEEEHHHCCCHHHHHHHHH
T ss_conf 76752678999999739955760587677898998642-----6730046888645887789751544323677899999
Q ss_pred CCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 0111233688996289872992599987487357679679971068687755999999999962
Q gi|255764473|r 240 VFQPFQVNLSLMSMAHPDALFMHCLPAHRGEEVINEVLDGPQSVVFDEAENRLHTQKAILLWCF 303 (306)
Q Consensus 240 ~~~~y~i~~~~l~~a~~~~~vmHplP~~rg~EI~~~v~d~~~s~~~~Qa~Ngl~vr~AiL~~~l 303 (306)
++.+||||.++|+++++|++||||||+|||+||+++|+++|+|+||+||+||+|+|||||+++|
T Consensus 237 ~~~~y~l~~~~l~~~~~~~i~mHplP~~rg~Ei~~~v~~~~~s~~~~Qa~Ngl~vrmAlL~~lL 300 (301)
T 2ef0_A 237 DFQGFQVNGELLKLLRPEGVFLHCLPAHYGEETTEEAVHGPRSRVFDQAENRLHTAKAVLLTLL 300 (301)
T ss_dssp HTTTCCBCHHHHTTSCTTCEEEECSCCCBTTTBCHHHHHSTTBCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCCHHHHHCCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8875646399996089896997999998897678778469856899999843999999999986
No 11
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=100.00 E-value=0 Score=627.46 Aligned_cols=300 Identities=36% Similarity=0.597 Sum_probs=271.8
Q ss_pred CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCC-CCCC
Q ss_conf 887717844589999999999999999665236665443798799994288835789999898634754333321-0000
Q gi|255764473|r 4 YPKHFADLSNISSSNLSCIIEVAKKIKNSSENIFENKPLSGKVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSG-SEMQ 82 (306)
Q Consensus 4 ~~k~~l~~~dl~~~~i~~ll~~A~~~k~~~~~~~~~~~l~gk~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~-~~ss 82 (306)
.+||||+++||++++|..||++|.++|+.+.+. ...|+||+++++|+|||||||+|||+|+++|||+++++++ .+|+
T Consensus 6 ~~khll~i~dls~~ei~~ll~~A~~~k~~~~~~--~~~l~~k~v~~lF~epSTRTR~SFe~A~~~LGg~~i~l~~~~~s~ 83 (328)
T 3grf_A 6 QTRHLLTISALCPKELAYLIDRALDMKKNPAKY--TARAANKTLLAFFAKPSLRTRVSLETAMTRLGGHAIYYELGANSN 83 (328)
T ss_dssp CSCCBSSGGGSCHHHHHHHHHHHHHHHHCGGGG--TTTTTTCEEEEEESSCCHHHHHHHHHHHHHHTCEEEEEEC-----
T ss_pred CCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCC--CCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEECCCCCCCC
T ss_conf 788715143199999999999999987374445--655689889999657873169999999998599478667320123
Q ss_pred CCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCC-------CCCCCC
Q ss_conf 1232107999997530010111210132006776301244124043332024678765576642001-------336773
Q gi|255764473|r 83 LGRAETIGDTAKVLSRYVDAIVMRTTNHSRLLELTEYATVPVINALTDNTHPCQIIADIMTFEEHRG-------SVKGKL 155 (306)
Q Consensus 83 ~~kgEsl~Dt~~~ls~~~D~iviR~~~~~~~~~~~~~~~vpvINa~~~~~HPtQaL~D~~Ti~e~~g-------~l~~~~ 155 (306)
++||||++||++++++|+|++|+||++++.+.++++++++||||||++++||||+|+|+|||+|++| .+++++
T Consensus 84 ~~kgEs~~Dt~~~ls~~~d~ivvR~~~~~~~~~~a~~~~vpVINa~~~~~HPtQaL~Dl~Ti~e~~g~~~~~~~~~~~l~ 163 (328)
T 3grf_A 84 VGGKETVQDTAEVFSRMVDICTARLATKEMMREMAQHASVPCINALDDFGHPLQMVCDFMTIKEKFTAAGEFSNGFKGIK 163 (328)
T ss_dssp -----CHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHCSSCEEESSCSSCCHHHHHHHHHHHHHHHHHTTCCTTTGGGCC
T ss_pred CCCCEEHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCE
T ss_conf 67862199999987334653456525033566777507862354776566826999999999998465333467513624
Q ss_pred EEEECCC-CCCCCCHHHCCCCCCEEEEEECHHCCCCC--CCCHHHHH------CCCCCCCCCCCHHHHCCCCCCCCCCCE
Q ss_conf 0461045-55543101001233125765200001321--00002432------013322213664663068733222100
Q gi|255764473|r 156 FSWSGDG-NNILHSLIEGAARFNYLLNIATPIGSEPR--NEYLNWAR------NQGASVALFHDAVQAVKGAHCVFTDTW 226 (306)
Q Consensus 156 i~~vGd~-~~v~hS~i~~~~~~g~~v~~~~P~~~~~~--~~~~~~~~------~~g~~i~~~~d~~eal~~aD~V~~~~~ 226 (306)
++|+||. +||+||++.++.++|+++.+++|+++.+. +.....++ ..|.++++++|++++++++|+||+++|
T Consensus 164 i~~~gd~~~~v~~S~~~~~~~~g~~v~i~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~ea~~~aDvvy~~~~ 243 (328)
T 3grf_A 164 FAYCGDSMNNVTYDLMRGCALLGMECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIKIFHDCKKGCEGVDVVYTDSW 243 (328)
T ss_dssp EEEESCCSSHHHHHHHHHHHHHTCEEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEEEESSHHHHHTTCSEEEECCC
T ss_pred EEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHCCCCEEEEEHH
T ss_conf 76327776542679999999779969996365335576699999999998763259839999679999617998985011
Q ss_pred EECCCCC--HHHHHHCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 0000220--13331001112336889962898729925999874873576796799710686877559999999999625
Q gi|255764473|r 227 ISMNQEF--KAREEHVFQPFQVNLSLMSMAHPDALFMHCLPAHRGEEVINEVLDGPQSVVFDEAENRLHTQKAILLWCFG 304 (306)
Q Consensus 227 ~~~~~~~--~~~~~~~~~~y~i~~~~l~~a~~~~~vmHplP~~rg~EI~~~v~d~~~s~~~~Qa~Ngl~vr~AiL~~~lG 304 (306)
++++... .....+++.+||||.++|++++++++||||||+|||+||+++|+|+|+|+||+||+||+|+|||||+|+|+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~v~~~~l~~a~~~~i~MHplP~~Rg~EI~~~V~d~~~s~i~~Qa~Ngl~vrmAlL~~lL~ 323 (328)
T 3grf_A 244 MSYHITKEQKEARLKVLTPFQVDDAVMAVTSKRSIFMNCLPATRGEEQTASVIDGPKSVCYDEAGNRLHSAMAVLDFFLH 323 (328)
T ss_dssp C--------CCTHHHHHGGGCBCHHHHTTSCTTCEEEECSCCCTTTTBCHHHHTSTTBCHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 20333055579999876424643999963699998989989998880188885798756999997209999999999984
Q ss_pred C
Q ss_conf 5
Q gi|255764473|r 305 I 305 (306)
Q Consensus 305 ~ 305 (306)
-
T Consensus 324 ~ 324 (328)
T 3grf_A 324 D 324 (328)
T ss_dssp C
T ss_pred H
T ss_conf 1
No 12
>2rgw_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, pyrimidine biosynthesis, thermostability; 2.80A {Methanococcus jannaschii} PDB: 3e2p_A
Probab=100.00 E-value=0 Score=622.17 Aligned_cols=296 Identities=26% Similarity=0.369 Sum_probs=279.3
Q ss_pred CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCC-CCCCC
Q ss_conf 87717844589999999999999999665236665443798799994288835789999898634754333321-00001
Q gi|255764473|r 5 PKHFADLSNISSSNLSCIIEVAKKIKNSSENIFENKPLSGKVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSG-SEMQL 83 (306)
Q Consensus 5 ~k~~l~~~dl~~~~i~~ll~~A~~~k~~~~~~~~~~~l~gk~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~-~~ss~ 83 (306)
|||||+++||++++|..||++|.++|+.+......++|+||+++++|+|||||||+|||+|+++|||++++++. .+|++
T Consensus 1 Mkh~l~~~dls~~ei~~ll~~A~~lK~~~~~~~~~~~L~gk~vallF~kpStRTR~SFe~A~~~LGg~~i~l~~~~~s~~ 80 (306)
T 2rgw_A 1 MKHLISMKDIGKEEILEILDEARKMEELLNTKRPLKLLEGKILATVFYEPSTRTRLSFETAMKRLGGEVITMTDLKSSSV 80 (306)
T ss_dssp CCCBCCGGGCCHHHHHHHHHHHHHHHHHHHTTSCCCTTTTCEEEEEESSCCHHHHHHHHHHHHHTTCEEEEECCSSTTTT
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 98847700099999999999999998876069977446999899986478750688999999985996212554311335
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCCEECCCCC-CCHHHHHHHHHHHHHHHCCCCCCCCEEEECCC
Q ss_conf 23210799999753001011121013200677630124412404333-20246787655766420013367730461045
Q gi|255764473|r 84 GRAETIGDTAKVLSRYVDAIVMRTTNHSRLLELTEYATVPVINALTD-NTHPCQIIADIMTFEEHRGSVKGKLFSWSGDG 162 (306)
Q Consensus 84 ~kgEsl~Dt~~~ls~~~D~iviR~~~~~~~~~~~~~~~vpvINa~~~-~~HPtQaL~D~~Ti~e~~g~l~~~~i~~vGd~ 162 (306)
+||||++||++++|+|+|+||+|++.+..++++++++++||||||++ .+||||+|+|++||+|++|+++|++|+|+||.
T Consensus 81 ~~~Es~~Dta~vls~~~d~iviR~~~~~~~~~~a~~~~vPVINAg~~~~~HP~QaLaDl~Ti~E~~g~l~glki~~vGD~ 160 (306)
T 2rgw_A 81 AKGESLIDTIRVISGYADIIVLRHPSEGAARLASEYSQVPIINAGDGSNQHPTQTLLDLYTIMREIGRIDGIKIAFVGDL 160 (306)
T ss_dssp TTTCCHHHHHHHHHHHCSEEEEECSSTTHHHHHHHHCSSCEEECC----CCHHHHHHHHHHHHHHHSCSSSCEEEEESCT
T ss_pred CCCCCHHHHHHHHCCCCCEEEEECCCCCCCHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCC
T ss_conf 68714999996614468569997222331357786277624527888766818999989999998588558889998056
Q ss_pred --CCCCCCHHHCCCCC-CEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCHHHHHH
Q ss_conf --55543101001233-125765200001321000024320133222136646630687332221000000220133310
Q gi|255764473|r 163 --NNILHSLIEGAARF-NYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFKAREEH 239 (306)
Q Consensus 163 --~~v~hS~i~~~~~~-g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~~~~~~ 239 (306)
|||+||++.++++| |+++++++|+++.+++.....++..|.++.++++++++++++|+||+++|++++.+......+
T Consensus 161 ~~~~v~~S~~~~~~~~~~~~v~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~aDvv~~~~~~~e~~~~~~~~~~ 240 (306)
T 2rgw_A 161 KYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTRIQKERFPDPNEYEK 240 (306)
T ss_dssp TTCHHHHHHHHHHTTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEEESSGGGCCTTCSEEEECCCCGGGCSSHHHHHH
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEECCHHHCCCHHHHHHHHHCCCEEEEEHHHHHHHHHHEEEECCCCCCCCCCCHHHHHH
T ss_conf 43531798999999848970698685475475677777762374367500255431111068522432246885889998
Q ss_pred CCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 01112336889962898729925999874873576796799710686877559999999999625
Q gi|255764473|r 240 VFQPFQVNLSLMSMAHPDALFMHCLPAHRGEEVINEVLDGPQSVVFDEAENRLHTQKAILLWCFG 304 (306)
Q Consensus 240 ~~~~y~i~~~~l~~a~~~~~vmHplP~~rg~EI~~~v~d~~~s~~~~Qa~Ngl~vr~AiL~~~lG 304 (306)
++.+||+|.++|+ +++++|||||| ||+||+++|+|+|+|+||+||+||+|+|||||+|+++
T Consensus 241 ~~~~~~v~~~~l~--~~~~i~mHclP--Rg~Ev~~~V~d~p~s~i~~QaeNrl~~~~AiL~~ll~ 301 (306)
T 2rgw_A 241 VKGSYKIKREYVE--GKKFIIMHPLP--RVDEIDYDVDDLPQAKYFKQSFYGIPVRMAILKKLIE 301 (306)
T ss_dssp HHHHHCBCHHHHT--TCSCEEECCSC--CSSSBCGGGTTSTTBCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHCCHHHHHHHHC--CCCCEEECCCC--CCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7263788999716--99989959998--8884488773687368999998639999999999972
No 13
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli K12} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=100.00 E-value=0 Score=615.65 Aligned_cols=295 Identities=27% Similarity=0.402 Sum_probs=271.6
Q ss_pred CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCC--CCCC
Q ss_conf 88771784458999999999999999966523666544379879999428883578999989863475433332--1000
Q gi|255764473|r 4 YPKHFADLSNISSSNLSCIIEVAKKIKNSSENIFENKPLSGKVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLS--GSEM 81 (306)
Q Consensus 4 ~~k~~l~~~dl~~~~i~~ll~~A~~~k~~~~~~~~~~~l~gk~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~--~~~s 81 (306)
++||||+++||++++|..||++|.++|+.+. .+.|+||+++++|+|||||||+|||+|+++|||++++++ ...+
T Consensus 5 ~~rh~l~i~dls~~ei~~ll~~A~~lK~~~~----~~~L~gk~iallF~kpSTRTR~SFe~A~~~LGg~~~~~~~~~~~~ 80 (310)
T 3csu_A 5 YQKHIISINDLSRDDLNLVLATAAKLKANPQ----PELLKHKVIASCFFEASTRTRLSFETSMHRLGASVVGFSDSANTS 80 (310)
T ss_dssp TTCCBCCGGGCCHHHHHHHHHHHHHHHHSCC----TTTTTTCEEEEEESSCCHHHHHHHHHHHHTTTCEEEEESCC----
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC----CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 7888587000999999999999999875898----755789989998627874439999999999199602257664322
Q ss_pred CCCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHCC-CCCCEECCCCC-CCHHHHHHHHHHHHHHHCCCCCCCCEEEE
Q ss_conf 01232107999997530010111210132006776301-24412404333-20246787655766420013367730461
Q gi|255764473|r 82 QLGRAETIGDTAKVLSRYVDAIVMRTTNHSRLLELTEY-ATVPVINALTD-NTHPCQIIADIMTFEEHRGSVKGKLFSWS 159 (306)
Q Consensus 82 s~~kgEsl~Dt~~~ls~~~D~iviR~~~~~~~~~~~~~-~~vpvINa~~~-~~HPtQaL~D~~Ti~e~~g~l~~~~i~~v 159 (306)
+.+||||++||++++++|+|+||+||+++....+++++ +++||||||++ .+||||+|+|++||+|++|+++|++|+|+
T Consensus 81 ~~~kgEs~~Dta~vls~~~d~iv~R~~~~~~~~~~~~~~~~vPVINag~~~~~HPtQ~LaDl~Ti~e~~g~l~g~kv~~v 160 (310)
T 3csu_A 81 LGKKGETLADTISVISTYVDAIVMRHPQEGAARLATEFSGNVPVLNAGDGSNQHPTQTLLDLFTIQETQGRLDNLHVAMV 160 (310)
T ss_dssp -CCSHHHHHHHHHHHTTTCSEEEEEESSTTHHHHHHHHCTTCCEEEEEETTSCCHHHHHHHHHHHHHHHSCSSSCEEEEE
T ss_pred CCCCCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEE
T ss_conf 36687519998766540476069984220145899983778876767788764718899878878764277689879998
Q ss_pred CCC--CCCCCCHHHCCCCCC-EEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCHHH
Q ss_conf 045--555431010012331-25765200001321000024320133222136646630687332221000000220133
Q gi|255764473|r 160 GDG--NNILHSLIEGAARFN-YLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFKAR 236 (306)
Q Consensus 160 Gd~--~~v~hS~i~~~~~~g-~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~~~ 236 (306)
||. +||+||++.++++|+ ..+++++|+++.|+++..+.++..|..+.+++|++++++++|+||+++|++++.+.. .
T Consensus 161 Gd~~~~~v~~S~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~d~~~a~~~aDvvy~~~~~~e~~~~~-~ 239 (310)
T 3csu_A 161 GDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRVQKERLDPS-E 239 (310)
T ss_dssp SCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEECSCGGGTTTTCSEEEECC-----------
T ss_pred ECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCCEEEEEEHHHCCCCCH-H
T ss_conf 468777147899999996163738984884137838999999861886533306776424787564200000234521-3
Q ss_pred HHHCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 310011123368899628987299259998748735767967997106868775599999999996255
Q gi|255764473|r 237 EEHVFQPFQVNLSLMSMAHPDALFMHCLPAHRGEEVINEVLDGPQSVVFDEAENRLHTQKAILLWCFGI 305 (306)
Q Consensus 237 ~~~~~~~y~i~~~~l~~a~~~~~vmHplP~~rg~EI~~~v~d~~~s~~~~Qa~Ngl~vr~AiL~~~lG~ 305 (306)
...++..||+|.++|+.++++++|||||| ||+||+++|+|+|+|+||+||+||+|+|||||+|+||-
T Consensus 240 ~~~~~~~~~v~~~~l~~a~~~~i~mHcLP--Rg~EV~~~V~d~p~S~v~~QaeNrl~~qkAlL~~ll~~ 306 (310)
T 3csu_A 240 YANVKAQFVLRASDLHNAKANMKVLHPLP--RVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNR 306 (310)
T ss_dssp -------CCBCGGGGTTCCTTCEEECCSC--CSSSBCHHHHTSTTBCHHHHHHTHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHHHCCCCCCEEEECCC--CCCEECHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 67788888867999963798939940899--96852287655886529999971399999999999785
No 14
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=100.00 E-value=0 Score=597.66 Aligned_cols=294 Identities=27% Similarity=0.392 Sum_probs=269.0
Q ss_pred CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCC-CCCCCC
Q ss_conf 8771784458999999999999999966523666544379879999428883578999989863475433332-100001
Q gi|255764473|r 5 PKHFADLSNISSSNLSCIIEVAKKIKNSSENIFENKPLSGKVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLS-GSEMQL 83 (306)
Q Consensus 5 ~k~~l~~~dl~~~~i~~ll~~A~~~k~~~~~~~~~~~l~gk~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~-~~~ss~ 83 (306)
|||||+++||+++++..||++|.++|+.+... .++|+||+|+++|+|||||||+|||+|+++|||+++++. ...+++
T Consensus 1 mkh~l~~~dls~~ei~~ll~~A~~~k~~~~~~--~~~l~gk~v~llF~k~StRTR~SFe~A~~~LGg~~i~~~~~~~~~~ 78 (299)
T 1pg5_A 1 LKHIISAYNFSRDELEDIFALTDKYSKNLNDT--RKILSGKTISIAFFEPSTRTYLSFQKAIINLGGDVIGFSGEESTSV 78 (299)
T ss_dssp CCCBCSGGGCCHHHHHHHHHHHHHHHSCCTTC--CCTTTTCEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEECC-----
T ss_pred CCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCC--CCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 98848601189999999999999997601666--6557999899996278731699999999980996213666311005
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCCEECCCCC-CCHHHHHHHHHHHHHHHCCCCCCCCEEEECCC
Q ss_conf 23210799999753001011121013200677630124412404333-20246787655766420013367730461045
Q gi|255764473|r 84 GRAETIGDTAKVLSRYVDAIVMRTTNHSRLLELTEYATVPVINALTD-NTHPCQIIADIMTFEEHRGSVKGKLFSWSGDG 162 (306)
Q Consensus 84 ~kgEsl~Dt~~~ls~~~D~iviR~~~~~~~~~~~~~~~vpvINa~~~-~~HPtQaL~D~~Ti~e~~g~l~~~~i~~vGd~ 162 (306)
+||||++||++++|+|+|++++|++.+..+.++++++++||||||++ .+||||+|+|++||+|++|++++++++|+||.
T Consensus 79 ~~~Es~~Dt~~vls~~~d~i~~R~~~~~~~~~~~~~s~vPvINAg~~~~~HPtQ~LaDl~Ti~e~~g~~~~l~i~~~gd~ 158 (299)
T 1pg5_A 79 AKGENLADTIRMLNNYSDGIVMRHKYDGASRFASEISDIPVINAGDGKHEHPTQAVIDIYTINKHFNTIDGLVFALLGDL 158 (299)
T ss_dssp --CCCHHHHHHHHHHHCSEEEEEESSBTHHHHHHHHCSSCEEEEEETTTBCHHHHHHHHHHHHHHHSCSTTCEEEEEECC
T ss_pred CCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCC
T ss_conf 78751999999986257448988423206888776357731117776777856899999999998388555637885177
Q ss_pred --CCCCCCHHHCCCCCCEEE-EEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCHHHHHH
Q ss_conf --555431010012331257-65200001321000024320133222136646630687332221000000220133310
Q gi|255764473|r 163 --NNILHSLIEGAARFNYLL-NIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFKAREEH 239 (306)
Q Consensus 163 --~~v~hS~i~~~~~~g~~v-~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~~~~~~ 239 (306)
+||+||++.++++||+.+ .+++|..+.++.++. +..+..+.++++..++++++|+||+++|++++........+
T Consensus 159 ~~~~v~~S~~~~~~~~g~~~~~~~~p~~~~~~~~~~---~~~~~~~~~~~~~~e~~~~aDvvy~~~~~~~~~~~~~~~~~ 235 (299)
T 1pg5_A 159 KYARTVNSLLRILTRFRPKLVYLISPQLLRARKEIL---DELNYPVKEVENPFEVINEVDVLYVTRIQKERFVDEMEYEK 235 (299)
T ss_dssp SSCHHHHHHHHHGGGSCCSEEEEECCGGGCCCHHHH---TTCCSCEEEESCGGGTGGGCSEEEEECCCSTTSSCHHHHHH
T ss_pred CCCHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHH---HHHCCCCCCCCCHHHHHCCCCEEEECCCCCCCCCHHHHHHH
T ss_conf 610577889999987488631125830135457776---54068743356988870787668750322245430788889
Q ss_pred CCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 011123368899628987299259998748735767967997106868775599999999996255
Q gi|255764473|r 240 VFQPFQVNLSLMSMAHPDALFMHCLPAHRGEEVINEVLDGPQSVVFDEAENRLHTQKAILLWCFGI 305 (306)
Q Consensus 240 ~~~~y~i~~~~l~~a~~~~~vmHplP~~rg~EI~~~v~d~~~s~~~~Qa~Ngl~vr~AiL~~~lG~ 305 (306)
++.+||+|.++|++++++++|||||| ||+||+++|+|+|+|++|+||+||+|+|||||+|+||-
T Consensus 236 ~~~~~~v~~~~~~~~~~~~ifmHcLP--rg~Ev~~~V~d~~~s~v~~Qa~Nrl~~~~AlL~~llg~ 299 (299)
T 1pg5_A 236 IKGSYIVSLDLANKMKKDSIILHPLP--RVNEIDRKVDKTTKAKYFEQASYGVPVRMSILTKIYGE 299 (299)
T ss_dssp HGGGGSBCHHHHHTSCTTCEEECCSC--CSSSBCGGGGGSTTBCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHCCCCCEEECCCC--CCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 88887641999972698979979999--98762877746874779999981499999999998088
No 15
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=100.00 E-value=0 Score=598.68 Aligned_cols=288 Identities=25% Similarity=0.340 Sum_probs=260.9
Q ss_pred CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC--
Q ss_conf 877178445899999999999999996652366654437987999942888357899998986347543333210000--
Q gi|255764473|r 5 PKHFADLSNISSSNLSCIIEVAKKIKNSSENIFENKPLSGKVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSGSEMQ-- 82 (306)
Q Consensus 5 ~k~~l~~~dl~~~~i~~ll~~A~~~k~~~~~~~~~~~l~gk~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~~ss-- 82 (306)
|||||+++||+ +|..|+++|.++|+.+.+. ...|+||+++++|+|||||||+|||+|+++|||++++++.++|+
T Consensus 1 Mk~~i~i~Dls--di~~ll~~a~~~k~~~~~~--~~~l~gK~va~lF~epSTRTR~SFe~A~~~LGg~~i~l~~~~ss~~ 76 (324)
T 1js1_X 1 MKKFTCVQDIG--DLKSALAESFEIKKDRFKY--VELGRNKTLLMIFFNSSLRTRLSTQKAALNLGMNVIVLDINQGAWK 76 (324)
T ss_dssp CCCBSSGGGGC--CHHHHHHHHHHHHHSTTTT--TTTTTTCEEEEEESSCCSHHHHHHHHHHHHTTCEEEEEECCGGGCC
T ss_pred CCCCCCHHHHH--HHHHHHHHHHHHHHCCCCC--CCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCC
T ss_conf 98747523389--9999999999998374435--6557998899996789712699999999984996997378876321
Q ss_pred ----------CCCCCCHHHHHHHHHHCCCEEEEEECCC----------CHHHHHHCCCCCCEECCCCCCCHHHHHHHHHH
Q ss_conf ----------1232107999997530010111210132----------00677630124412404333202467876557
Q gi|255764473|r 83 ----------LGRAETIGDTAKVLSRYVDAIVMRTTNH----------SRLLELTEYATVPVINALTDNTHPCQIIADIM 142 (306)
Q Consensus 83 ----------~~kgEsl~Dt~~~ls~~~D~iviR~~~~----------~~~~~~~~~~~vpvINa~~~~~HPtQaL~D~~ 142 (306)
.+||||++||++++|+|+|+||+|++++ ..+.++++++++|||||+++.+||||+|+|+|
T Consensus 77 ~~~~~~~~~~~~k~Es~~DT~~vls~~~D~iv~R~~~~~~~~~~~~~~~~~~~~a~~s~vPViNg~~~~~HPtQaL~Dl~ 156 (324)
T 1js1_X 77 LETERGVIMDGDKPEHLLEAIPVMGCYCDIIGVRSFARFENREYDYNEVIINQFIQHSGRPVFSMEAATRHPLQSFADLI 156 (324)
T ss_dssp EECCSSCCCCSSCCEEHHHHHHHHHHTCSEEEEECCCCSSCHHHHHHTHHHHHHHHHSSSCEEESSCSSCCHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCHHHHHHHCCHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHH
T ss_conf 23454300037777649999999986164258873221343431000579999998527853478887667689999999
Q ss_pred HHHHHCCCCCCCCEEEECC-----CCCCCCCHHHCCCCCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCC
Q ss_conf 6642001336773046104-----55554310100123312576520000132100002432013322213664663068
Q gi|255764473|r 143 TFEEHRGSVKGKLFSWSGD-----GNNILHSLIEGAARFNYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKG 217 (306)
Q Consensus 143 Ti~e~~g~l~~~~i~~vGd-----~~~v~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~ 217 (306)
||+|++|.+++++++++|+ ++||++|++.++.++|+++.+++|+++.+++.... .+.+++|+.+++++
T Consensus 157 Ti~e~~g~~~~~~~~~~~~~~~~~~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~-------~~~~~~d~~~a~~~ 229 (324)
T 1js1_X 157 TIEEYKKTARPKVVMTWAPHPRPLPQAVPNSFAEWMNATDYEFVITHPEGYELDPKFVG-------NARVEYDQMKAFEG 229 (324)
T ss_dssp HHHHHCSSSSCEEEEECCCCSSCCCSHHHHHHHHHHHTSSSEEEEECCTTCCCCHHHHT-------TCEEESCHHHHHTT
T ss_pred HHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHCC-------CCEECCCHHHHHCC
T ss_conf 99996376556538999843885401047899999985597645314764465301113-------51221117766337
Q ss_pred CCCCCCCCEEECCCCCHHHHHHCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf 73322210000002201333100111233688996289872992599987487357679679971068687755999999
Q gi|255764473|r 218 AHCVFTDTWISMNQEFKAREEHVFQPFQVNLSLMSMAHPDALFMHCLPAHRGEEVINEVLDGPQSVVFDEAENRLHTQKA 297 (306)
Q Consensus 218 aD~V~~~~~~~~~~~~~~~~~~~~~~y~i~~~~l~~a~~~~~vmHplP~~rg~EI~~~v~d~~~s~~~~Qa~Ngl~vr~A 297 (306)
||+||+++|++|+.+.......++.+||+|.++|+ ++++++||||||+|||+||+++|+|+|+|+||+||+||+|+|||
T Consensus 230 aDvV~t~~~~~~~~~~~~~~~~~~~~y~v~~~ll~-~~~dai~MHpLP~~Rg~EIs~eV~d~p~S~if~QaeNgl~~rmA 308 (324)
T 1js1_X 230 ADFIYAKNWAAYTGDNYGQILSTDRNWTVGDRQMA-VTNNAYFMHCLPVRRNMIVTDDVIESPQSIVIPEAANREISATV 308 (324)
T ss_dssp CSEEEECCCCCCSTTCTTCCCCCCTTSSBCHHHHT-TSSSCEEECCSCCCBTTTBCHHHHHSTTBCHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEEECCCCHHHHHHHHHCCCEECHHHHC-CCCCCEEECCCCCCCCCEECHHHHCCCCCHHHHHHHCCHHHHHH
T ss_conf 76689988886367307779987418725499874-79999997999998886637767568987299998620999999
Q ss_pred HHHHHHC
Q ss_conf 9999625
Q gi|255764473|r 298 ILLWCFG 304 (306)
Q Consensus 298 iL~~~lG 304 (306)
||+|+|.
T Consensus 309 lL~~lL~ 315 (324)
T 1js1_X 309 VLKRLLE 315 (324)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
T ss_conf 9999984
No 16
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=100.00 E-value=0 Score=596.40 Aligned_cols=297 Identities=32% Similarity=0.539 Sum_probs=260.4
Q ss_pred CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCC-
Q ss_conf 9888771784458999999999999999966523666544379879999428883578999989863475433332100-
Q gi|255764473|r 2 MTYPKHFADLSNISSSNLSCIIEVAKKIKNSSENIFENKPLSGKVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSGSE- 80 (306)
Q Consensus 2 m~~~k~~l~~~dl~~~~i~~ll~~A~~~k~~~~~~~~~~~l~gk~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~~- 80 (306)
|+ |||||+++||+++++..||++|.++|+.+. ...|+||+++++|+|||||||+|||+|+++|||+++++++..
T Consensus 21 m~-mkhlLsi~dls~~ei~~l~~~A~~~k~~~~----~~~L~gk~v~~lF~epSTRTR~SFe~A~~~LGg~~i~l~~~~s 95 (359)
T 1zq6_A 21 MS-LKHFLNTQDWSRAELDALLTQAALFKRNKL----GSELKGKSIALVFFNPSMRTRTSFELGAFQLGGHAVVLQPGKD 95 (359)
T ss_dssp ---CCCBSCGGGSCHHHHHHHHHHHHHHHHCCC----CCTTTTCEEEEEESSCCHHHHHHHHHHHHHTTCEEEEECHHHH
T ss_pred CC-CCCCCCHHHCCHHHHHHHHHHHHHHHHCCC----CCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCC
T ss_conf 86-665075233999999999999999983678----7668999899985589710899999999985995898278776
Q ss_pred -----------CCCCCCCCHHHHHHHHHHCCCEEEEEEC----------CCCHHHHHHCCCCCCEECCCCCCCHHHHHHH
Q ss_conf -----------0012321079999975300101112101----------3200677630124412404333202467876
Q gi|255764473|r 81 -----------MQLGRAETIGDTAKVLSRYVDAIVMRTT----------NHSRLLELTEYATVPVINALTDNTHPCQIIA 139 (306)
Q Consensus 81 -----------ss~~kgEsl~Dt~~~ls~~~D~iviR~~----------~~~~~~~~~~~~~vpvINa~~~~~HPtQaL~ 139 (306)
++..||||++||++++|+|+|+||+|++ ++..+.++++++++||||+| +++||||+|+
T Consensus 96 ~~~~~~~~~s~~~~~~~Es~~Dt~~~ls~y~D~iviR~~~~~~~~~~~~~~~~~~~~a~~~~vpvin~g-~~~HPtQaLl 174 (359)
T 1zq6_A 96 AWPIEFNLGTVMDGDTEEHIAEVARVLGRYVDLIGVRAFPKFVDWSKDREDQVLKSFAKYSPVPVINME-TITHPCQELA 174 (359)
T ss_dssp SCCEECSSSCCCCSSCCEEHHHHHHHHHHHCSEEEEECCCCSSCHHHHTTCHHHHHHHHHCSSCEEESS-SSCCHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC-CCCCCHHHHH
T ss_conf 442134666320366415799999987524878999636432220046016899999976798621688-8778547899
Q ss_pred HHHHHHHHCCC--CCCCCEEEE----CC--CCCCCCCHHHCCCCCCEEEEEECHH-CCCCCCCCHHH----HHCCCCCCC
Q ss_conf 55766420013--367730461----04--5555431010012331257652000-01321000024----320133222
Q gi|255764473|r 140 DIMTFEEHRGS--VKGKLFSWS----GD--GNNILHSLIEGAARFNYLLNIATPI-GSEPRNEYLNW----ARNQGASVA 206 (306)
Q Consensus 140 D~~Ti~e~~g~--l~~~~i~~v----Gd--~~~v~hS~i~~~~~~g~~v~~~~P~-~~~~~~~~~~~----~~~~g~~i~ 206 (306)
|+|||+|++|. ++|+++.++ || ++||+||++.++++||+++.+++|+ .+.|++...+. +...|.++.
T Consensus 175 Dl~Ti~e~~g~~~~~g~~~~~~~~~~gd~~~~~v~~S~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~i~ 254 (359)
T 1zq6_A 175 HALALQEHFGTPDLRGKKYVLTWTYHPKPLNTAVANSALTIATRMGMDVTLLCPTPDYILDERYMDWAAQNVAESGGSLQ 254 (359)
T ss_dssp HHHHHHHHHTSSCCTTCEEEEEECCCSSCCCSHHHHHHHHHHHHTTCEEEEECSSGGGCCCHHHHHHHHHHHHHHSCEEE
T ss_pred HHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEE
T ss_conf 99999997198322586378985114785543788888888987598799980684358888999998777887088618
Q ss_pred CCCCHHHHCCCCCCCCCCCEEECCCCCHH----HHHHCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCHHHHCCCCC
Q ss_conf 13664663068733222100000022013----33100111233688996289872992599987487357679679971
Q gi|255764473|r 207 LFHDAVQAVKGAHCVFTDTWISMNQEFKA----REEHVFQPFQVNLSLMSMAHPDALFMHCLPAHRGEEVINEVLDGPQS 282 (306)
Q Consensus 207 ~~~d~~eal~~aD~V~~~~~~~~~~~~~~----~~~~~~~~y~i~~~~l~~a~~~~~vmHplP~~rg~EI~~~v~d~~~s 282 (306)
+++|+.++++++|+||+++|++|+.+... ...+++++|++|+++++.+ ++++||||||+|||+||+++|+++|+|
T Consensus 255 ~~~d~~ea~~~aDvvyt~~~q~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~-~~~i~MHplP~~Rg~EI~~eV~d~p~s 333 (359)
T 1zq6_A 255 VSHDIDSAYAGADVVYAKSWGALPFFGNWEPEKPIRDQYQHFIVDERKMALT-NNGVFSHCLPLRRNVKATDAVMDSPNC 333 (359)
T ss_dssp EECCHHHHHTTCSEEEEECCCCGGGTTCCTTHHHHHGGGGGGSBCHHHHHTS-SSCEEECCSCCCBTTTBCHHHHTSTTB
T ss_pred EECCHHHHHCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHCCC-CCCEEECCCCCCCCCCCCHHHHCCCCC
T ss_conf 9558889845966999853773011540356799999876348279996378-999898999999988338767579975
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 06868775599999999996255
Q gi|255764473|r 283 VVFDEAENRLHTQKAILLWCFGI 305 (306)
Q Consensus 283 ~~~~Qa~Ngl~vr~AiL~~~lG~ 305 (306)
+||+||+||+|+|||||+|+||-
T Consensus 334 ~i~~Qa~Ngl~vrmAlL~~llg~ 356 (359)
T 1zq6_A 334 IAIDEAENRLHVQKAIMAALVGQ 356 (359)
T ss_dssp CHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 69999873099999999998578
No 17
>2at2_A Aspartate carbamoyltransferase; 3.00A {Bacillus subtilis} SCOP: c.78.1.1 c.78.1.1
Probab=100.00 E-value=0 Score=599.76 Aligned_cols=286 Identities=25% Similarity=0.383 Sum_probs=267.0
Q ss_pred CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 87717844589999999999999999665236665443798799994288835789999898634754333321000012
Q gi|255764473|r 5 PKHFADLSNISSSNLSCIIEVAKKIKNSSENIFENKPLSGKVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSGSEMQLG 84 (306)
Q Consensus 5 ~k~~l~~~dl~~~~i~~ll~~A~~~k~~~~~~~~~~~l~gk~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~~ss~~ 84 (306)
|||||+++||++++|..||++|.++|+++. .++|+||+++++|+|||||||+|||.|+++|||+++++++.+++++
T Consensus 1 Mkh~lsi~dls~~ei~~ll~~A~~lK~~~~----~~~L~gK~v~llF~~pSTRTR~SFe~A~~~LGg~~i~l~~~~~~~~ 76 (300)
T 2at2_A 1 MKHLTTMSELSTEEIKDLLQTAQELKSGKT----DNQLTGKFAANLFFEPSTRTRFSFEVAEKKLGMNVLNLDGTSTSVQ 76 (300)
T ss_pred CCCCCCHHHCCHHHHHHHHHHHHHHHCCCC----CCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCEEEEEECCCCCCC
T ss_conf 988386011899999999999999875898----7768998589987179704899999999981985999600011366
Q ss_pred CCCCHHHHHHHHHH-CCCEEEEEECCCCHHHHHHCCCCCCEECCCCC-CCHHHHHHHHHHHHHHHCCCCCCCCEEEECC-
Q ss_conf 32107999997530-01011121013200677630124412404333-2024678765576642001336773046104-
Q gi|255764473|r 85 RAETIGDTAKVLSR-YVDAIVMRTTNHSRLLELTEYATVPVINALTD-NTHPCQIIADIMTFEEHRGSVKGKLFSWSGD- 161 (306)
Q Consensus 85 kgEsl~Dt~~~ls~-~~D~iviR~~~~~~~~~~~~~~~vpvINa~~~-~~HPtQaL~D~~Ti~e~~g~l~~~~i~~vGd- 161 (306)
|||+++||+++++. |+|++|+||+++..+.++++++++||||||++ ++||||+|+|+|||+|++|.++|++|+|+||
T Consensus 77 ~gEs~~dt~~~l~~~~~d~iv~r~~~~~~~~~~a~~s~vPVINAg~~~~~HPtQaLaD~~Ti~e~~g~~~gl~ia~vGD~ 156 (300)
T 2at2_A 77 KGETLYDTIRTLESIGVDVCVIRHSEDEYYEELVSQVNIPILNAGDGCGQHPTQSLLDLMTIYEEFNTFKGLTVSIHGDI 156 (300)
T ss_pred CCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCC
T ss_conf 88768999996331015036785232016888640368742207888766857999889999998760279822025786
Q ss_pred -CCCCCCCHHHCCCCCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCHHHHHHC
Q ss_conf -5555431010012331257652000013210000243201332221366466306873322210000002201333100
Q gi|255764473|r 162 -GNNILHSLIEGAARFNYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFKAREEHV 240 (306)
Q Consensus 162 -~~~v~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~~~~~~~ 240 (306)
++||+||++.++.++|+++.+++|+++.++... +..+.+++++++++|++|+++|+.++.+......++
T Consensus 157 ~~~~v~~s~~~~~~~~~~~~~~~~p~~~~~~~~~----------~~~~~~~~~a~~~aDvv~~~~~~~~~~~~~~~~~~~ 226 (300)
T 2at2_A 157 KHSRVARSNAEVLTRLGARVLFSGPSEWQDEENT----------FGTYVSMDEAVESSDVVMLLRIQNERHQSAVSQEGY 226 (300)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEECHHHHCCCHHH----------CCEEECHHHHHHHCCEEEEEEECCCCCCCHHHHHHH
T ss_conf 4215689999998835982899580362854221----------343633878542068677632112112211246888
Q ss_pred CCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 1112336889962898729925999874873576796799710686877559999999999625
Q gi|255764473|r 241 FQPFQVNLSLMSMAHPDALFMHCLPAHRGEEVINEVLDGPQSVVFDEAENRLHTQKAILLWCFG 304 (306)
Q Consensus 241 ~~~y~i~~~~l~~a~~~~~vmHplP~~rg~EI~~~v~d~~~s~~~~Qa~Ngl~vr~AiL~~~lG 304 (306)
+.+||+|.++|++++++++||||||++||.||+++|+++|+|+||+||+||+|+|||||.|+|+
T Consensus 227 ~~~~~v~~~~l~~a~~~ai~mHcLP~~rg~EV~~~V~d~p~s~v~~QAeNrl~~~~AlL~~~L~ 290 (300)
T 2at2_A 227 LNKYGLTVERAERMKRHAIIMHPAPVNRGVEIDDSLVESEKSRIFKQMKNGVFIRMAVIQCALQ 290 (300)
T ss_pred HHHHCCHHHHHHHCCCCCEEECCCCCCCCCEECHHHHCCCCCHHHHHHHCHHHHHHHHHHHHHH
T ss_conf 7620032999972799989979988889963188672698554999996629999999999985
No 18
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal- binding, pyrimidine biosynthesis, zinc; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=100.00 E-value=0 Score=591.04 Aligned_cols=283 Identities=25% Similarity=0.335 Sum_probs=257.2
Q ss_pred CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 87717844589999999999999999665236665443798799994288835789999898634754333321000012
Q gi|255764473|r 5 PKHFADLSNISSSNLSCIIEVAKKIKNSSENIFENKPLSGKVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSGSEMQLG 84 (306)
Q Consensus 5 ~k~~l~~~dl~~~~i~~ll~~A~~~k~~~~~~~~~~~l~gk~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~~ss~~ 84 (306)
|||||++.||++++|+.||++|.++|+.+. ...+|+++++|+|||||||+|||+|+++|||+++++++.+||++
T Consensus 1 Mr~~l~~~dls~~ei~~ll~~A~~lk~~~~------~~~~k~~~llF~kpSTRTR~SFe~A~~~LGg~~i~l~~~~~~~~ 74 (291)
T 3d6n_B 1 MRSLISSLDLTREEVEEILKYAKEFKEGKE------ETIKASAVLFFSEPSTRTRLSFEKAARELGIETYLVSGSESSTV 74 (291)
T ss_dssp CCCBCCGGGCCHHHHHHHHHHHHHHHTTCC------CCCCCEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEETTTTSCC
T ss_pred CCCCCCHHHCCHHHHHHHHHHHHHHHHCCH------HCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEECCCCCCCCC
T ss_conf 987277022999999999999999972620------03687389998089743899999999986998896771111266
Q ss_pred CCCCHHHHHHHHHHC-CCEEEEEEC-CCCHHHHHHCCCCCCEECCCCC-CCHHHHHHHHHHHHHHHCCCCCCCCEEEECC
Q ss_conf 321079999975300-101112101-3200677630124412404333-2024678765576642001336773046104
Q gi|255764473|r 85 RAETIGDTAKVLSRY-VDAIVMRTT-NHSRLLELTEYATVPVINALTD-NTHPCQIIADIMTFEEHRGSVKGKLFSWSGD 161 (306)
Q Consensus 85 kgEsl~Dt~~~ls~~-~D~iviR~~-~~~~~~~~~~~~~vpvINa~~~-~~HPtQaL~D~~Ti~e~~g~l~~~~i~~vGd 161 (306)
||||++||+++++.| +|++|+||+ ++..+.++++++++||||||+| ++||||+|+|+|||+|++|.++|++|+|+||
T Consensus 75 kgEs~~Dt~~vls~~~~d~iv~R~~~~~~~~~~~a~~~~vpVINag~~~~~HPtQaLaDl~Ti~e~~g~l~~l~i~~vGD 154 (291)
T 3d6n_B 75 KGESFFDTLKTFEGLGFDYVVFRVPFVFFPYKEIVKSLNLRLVNAGDGTHQHPSQGLIDFFTIKEHFGEVKDLRVLYVGD 154 (291)
T ss_dssp TTCCHHHHHHHHHHTTCSEEEEEESSCCCSCHHHHHTCSSEEEEEEETTTBCHHHHHHHHHHHHHHHSCCTTCEEEEESC
T ss_pred CCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEC
T ss_conf 78748899997532464389982454420089997327977898888977683789987989999839877865999946
Q ss_pred C--CCCCCCHHHCCCCCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCH--HHH
Q ss_conf 5--555431010012331257652000013210000243201332221366466306873322210000002201--333
Q gi|255764473|r 162 G--NNILHSLIEGAARFNYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFK--ARE 237 (306)
Q Consensus 162 ~--~~v~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~--~~~ 237 (306)
. +||+||++.++.++|+++.+++|+++.|... ...++.+++|+.++++++|+||+++|+++++... ...
T Consensus 155 ~~~~~v~~S~~~~~~~~g~~~~~~~P~~~~p~~~-------~~~~i~~~~d~~~ai~~aDvv~~~~~~~~~~~~~~~~~~ 227 (291)
T 3d6n_B 155 IKHSRVFRSGAPLLNMFGAKIGVCGPKTLIPRDV-------EVFKVDVFDDVDKGIDWADVVIWLRLQKERQKENYIPSE 227 (291)
T ss_dssp CTTCHHHHHHHHHHHHTTCEEEEESCGGGSCTTG-------GGGCEEEESSHHHHHHHCSEEEECCCCTHHHHTTSSSCH
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEECCHHHCCCCH-------HHCCEEEECCHHHHHHHCCEEEECCCCCCCCHHHHHHHH
T ss_conf 8766899999999985699899989524374653-------027748977999998548999982444620105566777
Q ss_pred HHCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 100111233688996289872992599987487357679679971068687755999999999962
Q gi|255764473|r 238 EHVFQPFQVNLSLMSMAHPDALFMHCLPAHRGEEVINEVLDGPQSVVFDEAENRLHTQKAILLWCF 303 (306)
Q Consensus 238 ~~~~~~y~i~~~~l~~a~~~~~vmHplP~~rg~EI~~~v~d~~~s~~~~Qa~Ngl~vr~AiL~~~l 303 (306)
..++.+||+|.++++++ ++||||||++||.||+++|+++|+|+||+||+||+|+|||||+|++
T Consensus 228 ~~~~~~~~v~~~~~~~~---~i~mHcLPa~Rg~Ei~~~V~~~~~s~v~~QaeNrl~~~~AlL~~L~ 290 (291)
T 3d6n_B 228 SSYFKQFGLTKERFEKV---KLYMHPGPVNRNVDIDHELVYTEKSLIQEQVKNGIPVRKAIYKFLW 290 (291)
T ss_dssp HHHHHHHSBCHHHHTTC---CCEECSSCCCBTTTBCGGGSSSTTBCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCCC---CEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHCCHHHHHHHHHHHH
T ss_conf 66788888889865789---9894899999888679768369855799999711999999999986
No 19
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=96.59 E-value=0.013 Score=35.92 Aligned_cols=187 Identities=14% Similarity=0.135 Sum_probs=107.3
Q ss_pred CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEE-CCCCCHHHHHH-HHHHHHCCCCCCCCCCCCCC
Q ss_conf 87717844589999999999999999665236665443798799994-28883578999-98986347543333210000
Q gi|255764473|r 5 PKHFADLSNISSSNLSCIIEVAKKIKNSSENIFENKPLSGKVLAMIF-EKPSTRTRVSF-EVAMKHLGGDTIFLSGSEMQ 82 (306)
Q Consensus 5 ~k~~l~~~dl~~~~i~~ll~~A~~~k~~~~~~~~~~~l~gk~i~~lF-~e~StRTR~SF-e~A~~~LG~~~~~~~~~~ss 82 (306)
|| +|+=+.+..+--..+-+....+++. +. .| +....++ ..|+.++.... ..+|.++|..+..+...+.
T Consensus 4 M~-iLdGk~iA~~i~~~lk~~v~~l~~~---g~--~P---~LaiIlvgdd~aS~~Yv~~k~k~a~~~Gi~~~~~~l~~~- 73 (285)
T 3p2o_A 4 MT-LLDGKALSAKIKEELKEKNQFLKSK---GI--ES---CLAVILVGDNPASQTYVKSKAKACEECGIKSLVYHLNEN- 73 (285)
T ss_dssp CE-ECCHHHHHHHHHHHHHHHHHHHHTT---TC--CC---EEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTT-
T ss_pred CE-EEECHHHHHHHHHHHHHHHHHHHHC---CC--CC---CEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCC-
T ss_conf 89-8104999999999999999999847---99--98---379999699877899999999998436743899841566-
Q ss_pred CCCCCCHHHHHHHHHHC--CCEEEEEEC--CC---CHHHHH-HCCCCC---CEECCC-----C-CCCHHHHHHHHHHHHH
Q ss_conf 12321079999975300--101112101--32---006776-301244---124043-----3-3202467876557664
Q gi|255764473|r 83 LGRAETIGDTAKVLSRY--VDAIVMRTT--NH---SRLLEL-TEYATV---PVINAL-----T-DNTHPCQIIADIMTFE 145 (306)
Q Consensus 83 ~~kgEsl~Dt~~~ls~~--~D~iviR~~--~~---~~~~~~-~~~~~v---pvINa~-----~-~~~HPtQaL~D~~Ti~ 145 (306)
. .-|.+.+.+.-++.- +++|.+-.| ++ ..+.+. .-..++ .-.|.| . ....||-+++=+--+.
T Consensus 74 ~-t~~el~~~I~~lN~d~~V~GIlvqlPLP~~~~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~~PcTp~av~~lL~ 152 (285)
T 3p2o_A 74 I-TQNELLALINTLNHDDSVHGILVQLPLPDHICKDLILESIISSKDVDGFHPINVGYLNLGLESGFLPCTPLGVMKLLK 152 (285)
T ss_dssp C-CHHHHHHHHHHHHHCTTCCEEEECSCCCTTSCHHHHHHHSCGGGCTTCCSHHHHHHHHTTCCSSCCCHHHHHHHHHHH
T ss_pred C-CHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHH
T ss_conf 7-789999999987335762179985589854254889862887436563575555456517988877987799999999
Q ss_pred HHCCCCCCCCEEEECCCCCCCCCHHHCCCCCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCC
Q ss_conf 200133677304610455554310100123312576520000132100002432013322213664663068733222
Q gi|255764473|r 146 EHRGSVKGKLFSWSGDGNNILHSLIEGAARFNYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFT 223 (306)
Q Consensus 146 e~~g~l~~~~i~~vGd~~~v~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~ 223 (306)
++.-.++|++++++|...-|..=+..++..-|+.+++|.... .++.+..+.||++.+
T Consensus 153 ~~~i~l~Gk~vvVvGrS~iVG~Pla~lL~~~~atVt~~h~~t---------------------~~l~~~~~~ADivi~ 209 (285)
T 3p2o_A 153 AYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT---------------------KDLSLYTRQADLIIV 209 (285)
T ss_dssp HTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC---------------------SCHHHHHTTCSEEEE
T ss_pred HHCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCC---------------------HHHHHHHHHCHHHHH
T ss_conf 969998898899987875334999999864637377523665---------------------347777641103223
No 20
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=96.58 E-value=0.01 Score=36.62 Aligned_cols=132 Identities=14% Similarity=0.181 Sum_probs=77.2
Q ss_pred HHHHCCCCCCEECCCCCCCHHH--HHHHHHHHHHH--------------------HCC-CCCCCCEEEECCCCCCCCCHH
Q ss_conf 7763012441240433320246--78765576642--------------------001-336773046104555543101
Q gi|255764473|r 114 LELTEYATVPVINALTDNTHPC--QIIADIMTFEE--------------------HRG-SVKGKLFSWSGDGNNILHSLI 170 (306)
Q Consensus 114 ~~~~~~~~vpvINa~~~~~HPt--QaL~D~~Ti~e--------------------~~g-~l~~~~i~~vGd~~~v~hS~i 170 (306)
.+.+....|+|.|+.+....|. .+++=++.+.+ ..+ .+.|+++.++|- +++.....
T Consensus 102 ~~~~~~~gI~V~n~~g~~~~~vAE~~l~~iL~~~r~~~~~~~~~~~g~~~~~~~~~~~~~L~gk~vgIiG~-G~IG~~va 180 (351)
T 3jtm_A 102 LQAAAAAGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAYRAYDLEGKTIGTVGA-GRIGKLLL 180 (351)
T ss_dssp HHHHHHTTCEEEECTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECC-SHHHHHHH
T ss_pred CCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCEEEEECC-CCHHHHHH
T ss_conf 44336798699989987869999999999999975215777664328632345566633115876667774-65299999
Q ss_pred HCCCCCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCHHHHHHCCCCCCCCHHH
Q ss_conf 00123312576520000132100002432013322213664663068733222100000022013331001112336889
Q gi|255764473|r 171 EGAARFNYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFKAREEHVFQPFQVNLSL 250 (306)
Q Consensus 171 ~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~~~~~~~~~~y~i~~~~ 250 (306)
..+.-||+++....|....+.. .+.. .+....++++.++.+|+|..-. .+..+ ...-++.+.
T Consensus 181 ~~l~~fgm~V~~~d~~~~~~~~-----~~~~--~~~~~~~l~ell~~sDvI~l~~--Plt~~---------T~~li~~~~ 242 (351)
T 3jtm_A 181 QRLKPFGCNLLYHDRLQMAPEL-----EKET--GAKFVEDLNEMLPKCDVIVINM--PLTEK---------TRGMFNKEL 242 (351)
T ss_dssp HHHGGGCCEEEEECSSCCCHHH-----HHHH--CCEECSCHHHHGGGCSEEEECS--CCCTT---------TTTCBSHHH
T ss_pred HHHHHCCCEEEEECCCCCCHHH-----HHHC--CCCCCCCHHHHHHHCCEEEEEC--CCCCC---------CCCCCCHHH
T ss_conf 9998638867844587776666-----7751--9600478999985499999936--78743---------325639999
Q ss_pred HHCCCCCCEEECCC
Q ss_conf 96289872992599
Q gi|255764473|r 251 MSMAHPDALFMHCL 264 (306)
Q Consensus 251 l~~a~~~~~vmHpl 264 (306)
++.+|+++++.-.+
T Consensus 243 ~~~mk~~a~lIN~s 256 (351)
T 3jtm_A 243 IGKLKKGVLIVNNA 256 (351)
T ss_dssp HHHSCTTEEEEECS
T ss_pred HHHCCCCCEEEECC
T ss_conf 97379997899858
No 21
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosphate ION, oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=96.36 E-value=0.0093 Score=36.91 Aligned_cols=140 Identities=15% Similarity=0.202 Sum_probs=87.4
Q ss_pred HHHHCCCCCCEECCCCCCCHHH--HHHHHHHHHHHHCC-CCCCCCEEEECCCCCCCCCHHHCCCCCCEEEEEECHHCCCC
Q ss_conf 7763012441240433320246--78765576642001-33677304610455554310100123312576520000132
Q gi|255764473|r 114 LELTEYATVPVINALTDNTHPC--QIIADIMTFEEHRG-SVKGKLFSWSGDGNNILHSLIEGAARFNYLLNIATPIGSEP 190 (306)
Q Consensus 114 ~~~~~~~~vpvINa~~~~~HPt--QaL~D~~Ti~e~~g-~l~~~~i~~vGd~~~v~hS~i~~~~~~g~~v~~~~P~~~~~ 190 (306)
.+..+..+|+|.|+-+....+. .+|+=++.+.+..| .+.|+++.++|-++ +..-....+..||+++....|.....
T Consensus 74 ~~~~~~~gI~v~n~pg~na~aVAE~vl~~~l~~~r~~~~~l~~~tvGIvG~G~-IG~~va~~l~~~g~~v~~~d~~~~~~ 152 (380)
T 2o4c_A 74 LDYFAEAGIAWSSAPGCNARGVVDYVLGCLLAMAEVRGADLAERTYGVVGAGQ-VGGRLVEVLRGLGWKVLVCDPPRQAR 152 (380)
T ss_dssp HHHHHHHTCEEECCTTTTHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEECCSH-HHHHHHHHHHHTTCEEEEECHHHHHH
T ss_pred HHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCHHHCCCEEEEECCCC-CHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 99998789579957986808999999983335666523053077883879881-39999999986496210247742223
Q ss_pred CCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCHHHHHHCCCCCCCCHHHHHCCCCCCEEECCCCCCCCC
Q ss_conf 10000243201332221366466306873322210000002201333100111233688996289872992599987487
Q gi|255764473|r 191 RNEYLNWARNQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFKAREEHVFQPFQVNLSLMSMAHPDALFMHCLPAHRGE 270 (306)
Q Consensus 191 ~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~~~~~~~~~~y~i~~~~l~~a~~~~~vmHplP~~rg~ 270 (306)
. ......++++.+..+|+|..-. ....+.. .-..--+|.+.++.+|+++++.-.+ ||.
T Consensus 153 ~------------~~~~~~~l~e~l~~~Divslh~--plt~~~~-----~~T~~lin~~~l~~mk~ga~lIN~s---RG~ 210 (380)
T 2o4c_A 153 E------------PDGEFVSLERLLAEADVISLHT--PLNRDGE-----HPTRHLLDEPRLAALRPGTWLVNAS---RGA 210 (380)
T ss_dssp S------------TTSCCCCHHHHHHHCSEEEECC--CCCSSSS-----SCCTTSBCHHHHHTSCTTEEEEECS---CGG
T ss_pred C------------CCCCCCCHHHHHHCCCEEEEEC--CCCCCCC-----HHHHHHHHHHHHHHCCCCCEEEEEC---CCC
T ss_conf 4------------4232256888640078899956--6887654-----0157675099997379996899805---776
Q ss_pred CCCHHH
Q ss_conf 357679
Q gi|255764473|r 271 EVINEV 276 (306)
Q Consensus 271 EI~~~v 276 (306)
=|+.+.
T Consensus 211 vVde~a 216 (380)
T 2o4c_A 211 VVDNQA 216 (380)
T ss_dssp GBCHHH
T ss_pred CCCHHH
T ss_conf 669999
No 22
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=96.33 E-value=0.01 Score=36.70 Aligned_cols=141 Identities=16% Similarity=0.160 Sum_probs=88.5
Q ss_pred HHHHCCCCCCEECCCCCCCHHH--HHHHHHHHHHHHCC-CCCCCCEEEECCCCCCCCCHHHCCCCCCEEEEEECHHCCCC
Q ss_conf 7763012441240433320246--78765576642001-33677304610455554310100123312576520000132
Q gi|255764473|r 114 LELTEYATVPVINALTDNTHPC--QIIADIMTFEEHRG-SVKGKLFSWSGDGNNILHSLIEGAARFNYLLNIATPIGSEP 190 (306)
Q Consensus 114 ~~~~~~~~vpvINa~~~~~HPt--QaL~D~~Ti~e~~g-~l~~~~i~~vGd~~~v~hS~i~~~~~~g~~v~~~~P~~~~~ 190 (306)
.+..+...|+|.|+-+...-+. .+|+=++...+..| .+.|+++.++|- +++.......+..||+++....|.....
T Consensus 77 ~~~~~~~gI~v~n~~g~~a~aVAe~~l~~~l~~~~~~~~~~~~ktvGIiG~-G~IG~~va~~l~~~g~~V~~~d~~~~~~ 155 (381)
T 3oet_A 77 EAWLKQAGIGFSAAPGCNAIAVVEYVFSALLMLAERDGFSLRDRTIGIVGV-GNVGSRLQTRLEALGIRTLLCDPPRAAR 155 (381)
T ss_dssp HHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHHTTCCGGGCEEEEECC-SHHHHHHHHHHHHTTCEEEEECHHHHHT
T ss_pred HHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCEEEECCC-CCHHHHHHHHHHCCCCEEEEECCCCCCC
T ss_conf 888960943899567646899999999987899874135541868844376-7578999998754785799986632334
Q ss_pred CCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCHHHHHHCCCCCCCCHHHHHCCCCCCEEECCCCCCCCC
Q ss_conf 10000243201332221366466306873322210000002201333100111233688996289872992599987487
Q gi|255764473|r 191 RNEYLNWARNQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFKAREEHVFQPFQVNLSLMSMAHPDALFMHCLPAHRGE 270 (306)
Q Consensus 191 ~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~~~~~~~~~~y~i~~~~l~~a~~~~~vmHplP~~rg~ 270 (306)
. ......++++.++.+|+|..-+ .+..+.. .....-+|.+.++.+|+++++.... ||.
T Consensus 156 ---------~---~~~~~~~l~~ll~~sDiislh~--plt~~~~-----~~T~~li~~~~l~~mk~~a~lIN~s---RG~ 213 (381)
T 3oet_A 156 ---------G---DEGDFRTLDELVQEADVLTFHT--PLYKDGP-----YKTLHLADETLIRRLKPGAILINAC---RGP 213 (381)
T ss_dssp ---------T---CCSCBCCHHHHHHHCSEEEECC--CCCCSST-----TCCTTSBCHHHHHHSCTTEEEEECS---CGG
T ss_pred ---------C---CCCCCCCHHHHHHHCCCEEEEC--CCCCCCC-----CCCCCHHHHHHHHHCCCCCEEEEEC---CCC
T ss_conf ---------4---3344577999997478314532--6776554-----4341347788886308995799806---734
Q ss_pred CCCHHHH
Q ss_conf 3576796
Q gi|255764473|r 271 EVINEVL 277 (306)
Q Consensus 271 EI~~~v~ 277 (306)
=|+.+.+
T Consensus 214 vVde~aL 220 (381)
T 3oet_A 214 VVDNAAL 220 (381)
T ss_dssp GBCHHHH
T ss_pred CCCHHHH
T ss_conf 1089999
No 23
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepressor, transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=96.28 E-value=0.016 Score=35.29 Aligned_cols=136 Identities=14% Similarity=0.201 Sum_probs=79.8
Q ss_pred HHHHCCCCCCEECCCCCCCHHH--HHHHHHHHHHHH-------------------------C-CCCCCCCEEEECCCCCC
Q ss_conf 7763012441240433320246--787655766420-------------------------0-13367730461045555
Q gi|255764473|r 114 LELTEYATVPVINALTDNTHPC--QIIADIMTFEEH-------------------------R-GSVKGKLFSWSGDGNNI 165 (306)
Q Consensus 114 ~~~~~~~~vpvINa~~~~~HPt--QaL~D~~Ti~e~-------------------------~-g~l~~~~i~~vGd~~~v 165 (306)
.+.++.-.|+|.|+-+....+. .+++=++.+.++ . ..+.|+++.++|-+ ++
T Consensus 101 ~~~~~~~gI~V~n~pg~~~~~VAE~~l~liL~~~R~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~L~gktvGIiG~G-~I 179 (347)
T 1mx3_A 101 IKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLG-RV 179 (347)
T ss_dssp HHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCSHHHHHHHTTTCCCCTTCEEEEECCS-HH
T ss_pred HHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCEECCC-HH
T ss_conf 99898789999979985879999999999999987538998865327642223233334777542327660210458-16
Q ss_pred CCCHHHCCCCCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCHHHHHHCCCCCC
Q ss_conf 43101001233125765200001321000024320133222136646630687332221000000220133310011123
Q gi|255764473|r 166 LHSLIEGAARFNYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFKAREEHVFQPFQ 245 (306)
Q Consensus 166 ~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~~~~~~~~~~y~ 245 (306)
.......+.-||+++....|..-.... .. ..+....++++.++.+|+|..-. ....+ ...-
T Consensus 180 G~~va~~l~~fG~~V~~~d~~~~~~~~------~~--~~~~~~~~l~ell~~sDivslh~--Plt~~---------T~~l 240 (347)
T 1mx3_A 180 GQAVALRAKAFGFNVLFYDPYLSDGVE------RA--LGLQRVSTLQDLLFHSDCVTLHC--GLNEH---------NHHL 240 (347)
T ss_dssp HHHHHHHHHTTTCEEEEECTTSCTTHH------HH--HTCEECSSHHHHHHHCSEEEECC--CCCTT---------CTTS
T ss_pred HHHHHHHHHHCCCEEEEECCCCCCHHH------HH--CCCCCCCCHHHHHHHCCEEEEEC--CCCCC---------CCCC
T ss_conf 999999998769989985566550234------43--07633576878675488899705--54212---------2464
Q ss_pred CCHHHHHCCCCCCEEECCCCCCCCCCC
Q ss_conf 368899628987299259998748735
Q gi|255764473|r 246 VNLSLMSMAHPDALFMHCLPAHRGEEV 272 (306)
Q Consensus 246 i~~~~l~~a~~~~~vmHplP~~rg~EI 272 (306)
++.+.++.+|+++++--.. ||.=|
T Consensus 241 i~~~~l~~mk~gailIN~a---RG~iV 264 (347)
T 1mx3_A 241 INDFTVKQMRQGAFLVNTA---RGGLV 264 (347)
T ss_dssp BSHHHHTTSCTTEEEEECS---CTTSB
T ss_pred CCHHHHHHCCCCCEEEEEC---CCCEE
T ss_conf 5799997378997899835---75447
No 24
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=96.18 E-value=0.043 Score=32.55 Aligned_cols=134 Identities=10% Similarity=0.065 Sum_probs=75.7
Q ss_pred HHHCCCCCCEECCCCCCCHHH--HHHHHHHHHHHHC-------------------C-CCCCCCEEEECCCCCCCCCHHHC
Q ss_conf 763012441240433320246--7876557664200-------------------1-33677304610455554310100
Q gi|255764473|r 115 ELTEYATVPVINALTDNTHPC--QIIADIMTFEEHR-------------------G-SVKGKLFSWSGDGNNILHSLIEG 172 (306)
Q Consensus 115 ~~~~~~~vpvINa~~~~~HPt--QaL~D~~Ti~e~~-------------------g-~l~~~~i~~vGd~~~v~hS~i~~ 172 (306)
+.++...|+|.|+-+....++ .+++=++.+.++. + .+.++++.++|- +++.......
T Consensus 86 ~~~~~~gI~v~n~~g~~~~~VAE~~l~~iL~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~~vgi~G~-G~ig~~~a~~ 164 (331)
T 1xdw_A 86 EYAKELGFPMAFVPRYSPNAIAELAVTQAMMLLRHTAYTTSRTAKKNFKVDAFMFSKEVRNCTVGVVGL-GRIGRVAAQI 164 (331)
T ss_dssp HHHHHTTCCEECCCCCCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCSTTCCCCGGGSEEEEECC-SHHHHHHHHH
T ss_pred HHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCEEEEECC-CCCCHHHHHH
T ss_conf 989739889997999881679999999999998776776555431354333554541431429999866-7644378987
Q ss_pred CCCCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCHHHHHHCCCCCCCCHHHHH
Q ss_conf 12331257652000013210000243201332221366466306873322210000002201333100111233688996
Q gi|255764473|r 173 AARFNYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFKAREEHVFQPFQVNLSLMS 252 (306)
Q Consensus 173 ~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~~~~~~~~~~y~i~~~~l~ 252 (306)
+..||+.+....|.. ++ .. .......++++.++.+|+|..-. ....+ ..-.+|.+.++
T Consensus 165 l~~~~~~v~~~~~~~--~~-~~--------~~~~~~~~l~~ll~~sDiv~~~~--plt~~---------T~~li~~~~l~ 222 (331)
T 1xdw_A 165 FHGMGATVIGEDVFE--IK-GI--------EDYCTQVSLDEVLEKSDIITIHA--PYIKE---------NGAVVTRDFLK 222 (331)
T ss_dssp HHHTTCEEEEECSSC--CC-SC--------TTTCEECCHHHHHHHCSEEEECC--CCCTT---------TCCSBCHHHHH
T ss_pred HHCCCCEEECCCCCC--CC-CC--------CCEEEECCHHHHHHHCCCCCCCC--CCCCC---------CCCCCCHHHHH
T ss_conf 644683463044433--33-44--------33013235777543315554346--88745---------66746899996
Q ss_pred CCCCCCEEECCCCCCCCCCCCH
Q ss_conf 2898729925999874873576
Q gi|255764473|r 253 MAHPDALFMHCLPAHRGEEVIN 274 (306)
Q Consensus 253 ~a~~~~~vmHplP~~rg~EI~~ 274 (306)
.+|+++++--.. ||.=|+.
T Consensus 223 ~mk~~a~lIN~s---RG~vvde 241 (331)
T 1xdw_A 223 KMKDGAILVNCA---RGQLVDT 241 (331)
T ss_dssp TSCTTEEEEECS---CGGGBCH
T ss_pred HCCCCCEEEEEC---CCCCCCH
T ss_conf 089998899916---6432689
No 25
>3kbo_A Glyoxylate/hydroxypyruvate reductase A; NADP, cytoplasm, NAD, structural genomics; HET: NDP NDB EPE; 2.14A {Salmonella enterica subsp}
Probab=96.10 E-value=0.022 Score=34.42 Aligned_cols=131 Identities=10% Similarity=0.042 Sum_probs=74.7
Q ss_pred CCCCCEECCCCCC-CHHH--HHHHHHHHHHHHC-----------------CCCCCCCEEEECCCCCCCCCHHHCCCCCCE
Q ss_conf 1244124043332-0246--7876557664200-----------------133677304610455554310100123312
Q gi|255764473|r 119 YATVPVINALTDN-THPC--QIIADIMTFEEHR-----------------GSVKGKLFSWSGDGNNILHSLIEGAARFNY 178 (306)
Q Consensus 119 ~~~vpvINa~~~~-~HPt--QaL~D~~Ti~e~~-----------------g~l~~~~i~~vGd~~~v~hS~i~~~~~~g~ 178 (306)
.+++|++|..++. ..+. .+|+=++.+.+.+ ..+.|++++++|-+ ++.......+..||+
T Consensus 85 v~n~p~~~~~~~~~~~~vAE~~l~~~l~l~R~~~~~~~~~~~~~w~~~~~~~l~g~tvgIvG~G-~IG~~va~~l~~fG~ 163 (315)
T 3kbo_A 85 DASIPLFRLEDTGMGLQMQEYAVSQVLHWFRRFDDYQALKNQALWKPLPEYTREEFSVGIMGAG-VLGAKVAESLQAWGF 163 (315)
T ss_dssp CTTSCEECCCCTTHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCCCCCGGGCCEEEESCS-HHHHHHHHHHHTTTC
T ss_pred ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCC-HHHHHHHHHHHHCCC
T ss_conf 2077755565510399999999999999985908999999828787888735467578997618-389999999987499
Q ss_pred EEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCHHHHHHCCCCCCCCHHHHHCCCCCC
Q ss_conf 57652000013210000243201332221366466306873322210000002201333100111233688996289872
Q gi|255764473|r 179 LLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFKAREEHVFQPFQVNLSLMSMAHPDA 258 (306)
Q Consensus 179 ~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~~~~~~~~~~y~i~~~~l~~a~~~~ 258 (306)
++....|....... . ..+....++++.++.+|+|..-. ....+ ..--+|.+.++.+|+++
T Consensus 164 ~v~~~~~~~~~~~~------~---~~~~~~~~l~~ll~~sD~v~~~~--Plt~~---------T~~li~~~~l~~mk~~a 223 (315)
T 3kbo_A 164 PLRCWSRSRKSWPG------V---ESYVGREELRAFLNQTRVLINLL--PNTAQ---------TVGIINSELLDQLPDGA 223 (315)
T ss_dssp CEEEEESSCCCCTT------E---EEEESGGGHHHHHHTCSEEEECC--CCCTT---------TTTCBSHHHHTTSCTTE
T ss_pred CEEEECCCCCCCCC------C---CCEEEECCCEEECCCCCEEECCC--CCCCC---------CCCHHHHHHHHHHCCCC
T ss_conf 25520234432323------1---21233101000032033784047--88533---------33623299998614542
Q ss_pred EEECCCCCCCCCCCC
Q ss_conf 992599987487357
Q gi|255764473|r 259 LFMHCLPAHRGEEVI 273 (306)
Q Consensus 259 ~vmHplP~~rg~EI~ 273 (306)
++.-.+ ||.=|+
T Consensus 224 ~lINva---RG~vvd 235 (315)
T 3kbo_A 224 YVLNLA---RGVHVQ 235 (315)
T ss_dssp EEEECS---CGGGBC
T ss_pred EEEECC---CCCEEC
T ss_conf 588516---774577
No 26
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=95.85 E-value=0.025 Score=34.06 Aligned_cols=134 Identities=12% Similarity=0.081 Sum_probs=80.1
Q ss_pred HHHHHHCCCCCCEECCCCCCCHHH--HHHHHHHHHHHH------------C----------CCCCCCCEEEECCCCCCCC
Q ss_conf 067763012441240433320246--787655766420------------0----------1336773046104555543
Q gi|255764473|r 112 RLLELTEYATVPVINALTDNTHPC--QIIADIMTFEEH------------R----------GSVKGKLFSWSGDGNNILH 167 (306)
Q Consensus 112 ~~~~~~~~~~vpvINa~~~~~HPt--QaL~D~~Ti~e~------------~----------g~l~~~~i~~vGd~~~v~h 167 (306)
.-.+.+....++|-|+.+....|. .+++=++.+.++ + ..+.|+++.++|-+ ++..
T Consensus 81 id~~~~~~~gI~v~n~~~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~~~~~~~~~~~~~g~~l~gk~vgIiG~G-~IG~ 159 (320)
T 1gdh_A 81 IDLDACKARGIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFG-SIGQ 159 (320)
T ss_dssp BCHHHHHHTTCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCS-HHHH
T ss_pred HCHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCEEEEEEEC-HHHH
T ss_conf 269999977999997899671999999999999975234666554432124655433425426259889998166-6999
Q ss_pred CHHHCCCCCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCHHHHHHCCCCCCCC
Q ss_conf 10100123312576520000132100002432013322213664663068733222100000022013331001112336
Q gi|255764473|r 168 SLIEGAARFNYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFKAREEHVFQPFQVN 247 (306)
Q Consensus 168 S~i~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~~~~~~~~~~y~i~ 247 (306)
.....+..||+++....|.......+ .........++++.++.+|+|..-. ....+ ..-.+|
T Consensus 160 ~va~~l~~fg~~V~~~~~~~~~~~~~-------~~~~~~~~~~l~~ll~~~D~v~~~~--plt~~---------T~~li~ 221 (320)
T 1gdh_A 160 ALAKRAQGFDMDIDYFDTHRASSSDE-------ASYQATFHDSLDSLLSVSQFFSLNA--PSTPE---------TRYFFN 221 (320)
T ss_dssp HHHHHHHTTTCEEEEECSSCCCHHHH-------HHHTCEECSSHHHHHHHCSEEEECC--CCCTT---------TTTCBS
T ss_pred HHHHHHHHCCCEEEEECCCCCCHHHH-------HHCCCEECCCHHHHHHCCCEEEECC--CCCHH---------HHHEEC
T ss_conf 99999874287688866877754555-------3126332377999962399899868--99826---------642118
Q ss_pred HHHHHCCCCCCEEECCC
Q ss_conf 88996289872992599
Q gi|255764473|r 248 LSLMSMAHPDALFMHCL 264 (306)
Q Consensus 248 ~~~l~~a~~~~~vmHpl 264 (306)
.+.++.+|+++++.-.+
T Consensus 222 ~~~l~~mk~~a~liN~~ 238 (320)
T 1gdh_A 222 KATIKSLPQGAIVVNTA 238 (320)
T ss_dssp HHHHTTSCTTEEEEECS
T ss_pred HHHHHHCCCCEEEEECC
T ss_conf 99994377537999757
No 27
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=95.70 E-value=0.1 Score=30.10 Aligned_cols=169 Identities=12% Similarity=0.058 Sum_probs=96.6
Q ss_pred CCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEE-CCCCCHHHHHH-HHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 17844589999999999999999665236665443798799994-28883578999-98986347543333210000123
Q gi|255764473|r 8 FADLSNISSSNLSCIIEVAKKIKNSSENIFENKPLSGKVLAMIF-EKPSTRTRVSF-EVAMKHLGGDTIFLSGSEMQLGR 85 (306)
Q Consensus 8 ~l~~~dl~~~~i~~ll~~A~~~k~~~~~~~~~~~l~gk~i~~lF-~e~StRTR~SF-e~A~~~LG~~~~~~~~~~ss~~k 85 (306)
+|+=+.+.++-...+-+...+++.. ... .| +....++ ..|..++...- ..+|.++|.++....-... . .
T Consensus 5 ildGk~iA~~i~~~lk~~v~~l~~~---~~~-~P---~LaiIlvgdd~aS~~Yv~~K~k~a~~~Gi~~~~~~l~~~-~-s 75 (288)
T 1b0a_A 5 IIDGKTIAQQVRSEVAQKVQARIAA---GLR-AP---GLAVVLVGSNPASQIYVASKRKACEEVGFVSRSYDLPET-T-S 75 (288)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHT---TCC-CC---EEEEEEESCCHHHHHHHHHHHHHHHHHTCEECCEEECTT-C-C
T ss_pred EEEHHHHHHHHHHHHHHHHHHHHHC---CCC-CC---CEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCC-C-C
T ss_conf 8447999999999999999999973---899-98---479999589764899999999999865965999978999-9-9
Q ss_pred CCCHHHHHHHHHH--CCCEEEEEECC--CCHHHHHHC----CCC---CCEECCC-----CCCCHHHHHHHHHHHHHHHCC
Q ss_conf 2107999997530--01011121013--200677630----124---4124043-----332024678765576642001
Q gi|255764473|r 86 AETIGDTAKVLSR--YVDAIVMRTTN--HSRLLELTE----YAT---VPVINAL-----TDNTHPCQIIADIMTFEEHRG 149 (306)
Q Consensus 86 gEsl~Dt~~~ls~--~~D~iviR~~~--~~~~~~~~~----~~~---vpvINa~-----~~~~HPtQaL~D~~Ti~e~~g 149 (306)
-|-+.+.++-|+. -+|+|.+-.|- +-....+-. ..+ ..-.|.| .....||-+++=+.-+..+.-
T Consensus 76 ~~el~~~I~~LN~D~~V~GIlVQlPLP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~PcTp~av~~ll~~~~i 155 (288)
T 1b0a_A 76 EAELLELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDGFHPYNVGRLCQRAPRLRPCTPRGIVTLLERYNI 155 (288)
T ss_dssp HHHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHTTSCTTTCTTCCSHHHHHHHHTTCCSSCCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCHHCCCHHHHCEECCCCCCCCCCCHHHHHHHHHHHCC
T ss_conf 99999999998479864548985699864310332104687767300671110201168764367778999999997334
Q ss_pred CCCCCCEEEECCCCCCCCCHHHCCCCCCEEEEEECH
Q ss_conf 336773046104555543101001233125765200
Q gi|255764473|r 150 SVKGKLFSWSGDGNNILHSLIEGAARFNYLLNIATP 185 (306)
Q Consensus 150 ~l~~~~i~~vGd~~~v~hS~i~~~~~~g~~v~~~~P 185 (306)
.++|++++++|...-|..-+..++..-|+.+++|..
T Consensus 156 ~~~Gk~vvViGrS~iVG~Pla~ll~~~~atVt~~hs 191 (288)
T 1b0a_A 156 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHR 191 (288)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECS
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHCCCCCCEEEECC
T ss_conf 658987899545555553898860145760798357
No 28
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii OT3}
Probab=95.67 E-value=0.027 Score=33.83 Aligned_cols=136 Identities=17% Similarity=0.227 Sum_probs=79.6
Q ss_pred HHHHCCCCCCEECCCCCCCHHH--HHHHHHHHHHHH------------------CC-CCCCCCEEEECCCCCCCCCHHHC
Q ss_conf 7763012441240433320246--787655766420------------------01-33677304610455554310100
Q gi|255764473|r 114 LELTEYATVPVINALTDNTHPC--QIIADIMTFEEH------------------RG-SVKGKLFSWSGDGNNILHSLIEG 172 (306)
Q Consensus 114 ~~~~~~~~vpvINa~~~~~HPt--QaL~D~~Ti~e~------------------~g-~l~~~~i~~vGd~~~v~hS~i~~ 172 (306)
...+...++.|.|+-+...-|. .+++=++.+.+. .| .+.|+++.++|-++ +.......
T Consensus 82 ~~~~~~~~I~v~n~~g~~~~~VAE~~l~~iL~~~R~~~~~~~~~~~~~~~~~~~~~~~l~~~~vgIiG~G~-IG~~va~~ 160 (307)
T 1wwk_A 82 VEAAKEKGIEVVNAPAASSRSVAELAVGLMFSVARKIAFADRKMREGVWAKKEAMGIELEGKTIGIIGFGR-IGYQVAKI 160 (307)
T ss_dssp HHHHHHHTCEEECCGGGGHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCTTTCCBCCCTTCEEEEECCSH-HHHHHHHH
T ss_pred HHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEECCCCEEEEECCCH-HHHHHHHH
T ss_conf 89897339467458985589999999999999985233678999839865457774404698999979288-89999999
Q ss_pred CCCCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCHHHHHHCCCCCCCCHHHHH
Q ss_conf 12331257652000013210000243201332221366466306873322210000002201333100111233688996
Q gi|255764473|r 173 AARFNYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFKAREEHVFQPFQVNLSLMS 252 (306)
Q Consensus 173 ~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~~~~~~~~~~y~i~~~~l~ 252 (306)
+..||+++....|.... ......+ ....++++.++.+|+|..- .....+ ...-+|.+.++
T Consensus 161 l~~fg~~v~~~~~~~~~------~~~~~~~---~~~~~l~~ll~~sDiv~l~--lplt~~---------T~~li~~~~l~ 220 (307)
T 1wwk_A 161 ANALGMNILLYDPYPNE------ERAKEVN---GKFVDLETLLKESDVVTIH--VPLVES---------TYHLINEERLK 220 (307)
T ss_dssp HHHTTCEEEEECSSCCH------HHHHHTT---CEECCHHHHHHHCSEEEEC--CCCSTT---------TTTCBCHHHHH
T ss_pred HHHCCCEEEEECCCCCH------HHHHHCC---CEECCHHHHHHHCCEEEEC--CCCCCC---------CCCCCCHHHHH
T ss_conf 98779989998799976------6676429---4467899999759999997--899831---------12656999997
Q ss_pred CCCCCCEEECCCCCCCCCCCC
Q ss_conf 289872992599987487357
Q gi|255764473|r 253 MAHPDALFMHCLPAHRGEEVI 273 (306)
Q Consensus 253 ~a~~~~~vmHplP~~rg~EI~ 273 (306)
.+|+++++--.+ ||.=|+
T Consensus 221 ~mk~~~~liN~~---RG~~vd 238 (307)
T 1wwk_A 221 LMKKTAILINTS---RGPVVD 238 (307)
T ss_dssp HSCTTCEEEECS---CGGGBC
T ss_pred HCCCCEEEEECC---CCCCCC
T ss_conf 379980999778---664469
No 29
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, structural genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=95.51 E-value=0.028 Score=33.81 Aligned_cols=138 Identities=19% Similarity=0.206 Sum_probs=81.8
Q ss_pred HHHHCCCCCCEECCCCCCCHHH--HHHHHHHHHHHH-------------------------CC-CCCCCCEEEECCCCCC
Q ss_conf 7763012441240433320246--787655766420-------------------------01-3367730461045555
Q gi|255764473|r 114 LELTEYATVPVINALTDNTHPC--QIIADIMTFEEH-------------------------RG-SVKGKLFSWSGDGNNI 165 (306)
Q Consensus 114 ~~~~~~~~vpvINa~~~~~HPt--QaL~D~~Ti~e~-------------------------~g-~l~~~~i~~vGd~~~v 165 (306)
........++|.|+-+....|. .+++=++.+.+. .| .+.|+++.++|-+ ++
T Consensus 83 ~~~~~~~~I~v~n~~g~~~~~VAE~~l~~iL~l~R~l~~~~~~~~~g~w~~~~~~~~~~~~~g~~L~g~~vgiiG~G-~I 161 (334)
T 2dbq_A 83 IEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGLG-RI 161 (334)
T ss_dssp HHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTSHHHHTTCCCCTTTTCCCCCTTCEEEEECCS-HH
T ss_pred HHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC-HH
T ss_conf 89998669653328987740448999999999865546889999808753355556754445510579989998178-89
Q ss_pred CCCHHHCCCCCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCHHHHHHCCCCCC
Q ss_conf 43101001233125765200001321000024320133222136646630687332221000000220133310011123
Q gi|255764473|r 166 LHSLIEGAARFNYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFKAREEHVFQPFQ 245 (306)
Q Consensus 166 ~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~~~~~~~~~~y~ 245 (306)
.+.....+..||+++....|.. .+.. ....+. ...++++.++.+|+|..-. ....+ ....
T Consensus 162 G~~va~~l~~fg~~v~~~~~~~--~~~~----~~~~~~---~~~~l~ell~~sDii~~~~--plt~~---------T~~l 221 (334)
T 2dbq_A 162 GQAIAKRAKGFNMRILYYSRTR--KEEV----ERELNA---EFKPLEDLLRESDFVVLAV--PLTRE---------TYHL 221 (334)
T ss_dssp HHHHHHHHHHTTCEEEEECSSC--CHHH----HHHHCC---EECCHHHHHHHCSEEEECC--CCCTT---------TTTC
T ss_pred HHHHHHHHHCCCCEEEEECCCC--CHHH----HHHCCC---EECCHHHHHHHCCEEEECC--CCCCC---------CCCC
T ss_conf 9999999760787899736887--3334----765294---4578999986699999928--99730---------1256
Q ss_pred CCHHHHHCCCCCCEEECCCCCCCCCCCCHH
Q ss_conf 368899628987299259998748735767
Q gi|255764473|r 246 VNLSLMSMAHPDALFMHCLPAHRGEEVINE 275 (306)
Q Consensus 246 i~~~~l~~a~~~~~vmHplP~~rg~EI~~~ 275 (306)
++.+.++.+|+++++--.+ ||.=|+.+
T Consensus 222 i~~~~~~~mk~ga~lIN~a---RG~~vde~ 248 (334)
T 2dbq_A 222 INEERLKLMKKTAILINIA---RGKVVDTN 248 (334)
T ss_dssp BCHHHHHHSCTTCEEEECS---CGGGBCHH
T ss_pred CCHHHHHHCCCCEEEEEEC---CCCCCCHH
T ss_conf 5999997218981999947---88656899
No 30
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=95.51 E-value=0.081 Score=30.74 Aligned_cols=126 Identities=14% Similarity=0.204 Sum_probs=74.8
Q ss_pred CCCEECCCCCCCHHH--HHHHHHHHHHHH--------------------CC-CCCCCCEEEECCCCCCCCCHHHCCCCCC
Q ss_conf 441240433320246--787655766420--------------------01-3367730461045555431010012331
Q gi|255764473|r 121 TVPVINALTDNTHPC--QIIADIMTFEEH--------------------RG-SVKGKLFSWSGDGNNILHSLIEGAARFN 177 (306)
Q Consensus 121 ~vpvINa~~~~~HPt--QaL~D~~Ti~e~--------------------~g-~l~~~~i~~vGd~~~v~hS~i~~~~~~g 177 (306)
.++|.|+-+....+. .+++=++.+.++ .+ .+.|+++.++|-+ ++....+..+..||
T Consensus 109 ~I~v~n~~g~~a~~VAE~~l~l~L~l~R~~~~~~~~~~~~~w~~~~~~~~~~~l~gk~~giiG~G-~IG~~va~~l~~fg 187 (364)
T 2j6i_A 109 KISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEVAAIAKDAYDIEGKTIATIGAG-RIGYRVLERLVPFN 187 (364)
T ss_dssp CCEEEECTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCS-HHHHHHHHHHGGGC
T ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEE-HHHHHHHHHHHHCC
T ss_conf 27999789989799999999999999846299999998376543334667534549889999533-89999999975303
Q ss_pred EEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCHHHHHHCCCCCCCCHHHHHCCCCC
Q ss_conf 25765200001321000024320133222136646630687332221000000220133310011123368899628987
Q gi|255764473|r 178 YLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFKAREEHVFQPFQVNLSLMSMAHPD 257 (306)
Q Consensus 178 ~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~~~~~~~~~~y~i~~~~l~~a~~~ 257 (306)
+.+.+..|....+... .....+....++++.++.+|+|..-. ....+ ..-.++.+.++.+|++
T Consensus 188 ~~v~~~~~~~~~~~~~------~~~~~~~~~~~L~ell~~sDiV~l~~--Plt~~---------T~~li~~~~f~~mK~g 250 (364)
T 2j6i_A 188 PKELLYYDYQALPKDA------EEKVGARRVENIEELVAQADIVTVNA--PLHAG---------TKGLINKELLSKFKKG 250 (364)
T ss_dssp CSEEEEECSSCCCHHH------HHHTTEEECSSHHHHHHTCSEEEECC--CCSTT---------TTTCBCHHHHTTSCTT
T ss_pred CCEEEECCCCCCCCHH------HHHCCCCCCCCHHHHHHHCCEEEECC--CCCCC---------CCCCCCHHHHHHCCCC
T ss_conf 6347631455554004------65328512568999985398988636--77434---------4030009999727999
Q ss_pred CEEECCC
Q ss_conf 2992599
Q gi|255764473|r 258 ALFMHCL 264 (306)
Q Consensus 258 ~~vmHpl 264 (306)
+++--..
T Consensus 251 a~lIN~a 257 (364)
T 2j6i_A 251 AWLVNTA 257 (364)
T ss_dssp EEEEECS
T ss_pred CEEEEEC
T ss_conf 8799606
No 31
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=95.49 E-value=0.027 Score=33.89 Aligned_cols=94 Identities=11% Similarity=0.132 Sum_probs=70.4
Q ss_pred CCCCCCCEEEECCCCCCCCCHHHCCCCCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEE
Q ss_conf 13367730461045555431010012331257652000013210000243201332221366466306873322210000
Q gi|255764473|r 149 GSVKGKLFSWSGDGNNILHSLIEGAARFNYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFTDTWIS 228 (306)
Q Consensus 149 g~l~~~~i~~vGd~~~v~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~~~~~~ 228 (306)
..+.|.+++++|-+ ++....+..+..+|+++.++.... .....++..|.++..+.++.+.++++|+|+...
T Consensus 151 ~~l~g~~v~i~G~G-~~g~~~~~~~~~~g~~v~v~~r~~-----~~~~~~~~~g~~~~~~~~l~~~~~~aDvvi~~~--- 221 (293)
T 3d4o_A 151 FTIHGANVAVLGLG-RVGMSVARKFAALGAKVKVGARES-----DLLARIAEMGMEPFHISKAAQELRDVDVCINTI--- 221 (293)
T ss_dssp SCSTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEEESSH-----HHHHHHHHTTSEEEEGGGHHHHTTTCSEEEECC---
T ss_pred CCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCC-----CHHHHHHHCCCEEEECCHHHHHHCCCCEEEECC---
T ss_conf 35478789998888-899999999997699799995773-----008999851883485330677757699999899---
Q ss_pred CCCCCHHHHHHCCCCCCCCHHHHHCCCCCCEEECCC
Q ss_conf 002201333100111233688996289872992599
Q gi|255764473|r 229 MNQEFKAREEHVFQPFQVNLSLMSMAHPDALFMHCL 264 (306)
Q Consensus 229 ~~~~~~~~~~~~~~~y~i~~~~l~~a~~~~~vmHpl 264 (306)
+ ..-++.+.++..++++++.--.
T Consensus 222 ------p-------~~~i~~~~l~~~~~gaviiDva 244 (293)
T 3d4o_A 222 ------P-------ALVVTANVLAEMPSHTFVIDLA 244 (293)
T ss_dssp ------S-------SCCBCHHHHHHSCTTCEEEECS
T ss_pred ------C-------CCCCCHHHHHHCCCCCEEEEEC
T ss_conf ------9-------8758899997289997999948
No 32
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, serine metabolism; HET: NAD; 1.70A {Homo sapiens}
Probab=95.47 E-value=0.092 Score=30.37 Aligned_cols=137 Identities=16% Similarity=0.124 Sum_probs=81.0
Q ss_pred HHHCCCCCCEECCCCCCCHHH--HHHHHHHHHHHH------------------CC-CCCCCCEEEECCCCCCCCCHHHCC
Q ss_conf 763012441240433320246--787655766420------------------01-336773046104555543101001
Q gi|255764473|r 115 ELTEYATVPVINALTDNTHPC--QIIADIMTFEEH------------------RG-SVKGKLFSWSGDGNNILHSLIEGA 173 (306)
Q Consensus 115 ~~~~~~~vpvINa~~~~~HPt--QaL~D~~Ti~e~------------------~g-~l~~~~i~~vGd~~~v~hS~i~~~ 173 (306)
+.++..+++|.|+-+....+. .+++=++.+.+. .| .+.|+++.++|-+ ++.......+
T Consensus 106 ~~a~~~gI~v~n~p~~~~~~VAE~~i~~iL~l~R~i~~~~~~~~~g~w~~~~~~g~eL~gktvgIiG~G-~IG~~va~~l 184 (335)
T 2g76_A 106 EAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLG-RIGREVATRM 184 (335)
T ss_dssp HHHHHHTCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCTGGGCBCCCTTCEEEEECCS-HHHHHHHHHH
T ss_pred HHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCC-HHHHHHHHHH
T ss_conf 999867905742798763147999999999996167999999980987656767623568889998987-8999999985
Q ss_pred CCCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCHHHHHHCCCCCCCCHHHHHC
Q ss_conf 23312576520000132100002432013322213664663068733222100000022013331001112336889962
Q gi|255764473|r 174 ARFNYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFKAREEHVFQPFQVNLSLMSM 253 (306)
Q Consensus 174 ~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~~~~~~~~~~y~i~~~~l~~ 253 (306)
..||+++....|.. .+ ......+. ...++++.++.+|+|..-. ....+ ..--+|.+.++.
T Consensus 185 ~~fg~~v~~yd~~~--~~----~~~~~~~~---~~~~l~~ll~~sDivslh~--plt~~---------T~~li~~~~l~~ 244 (335)
T 2g76_A 185 QSFGMKTIGYDPII--SP----EVSASFGV---QQLPLEEIWPLCDFITVHT--PLLPS---------TTGLLNDNTFAQ 244 (335)
T ss_dssp HTTTCEEEEECSSS--CH----HHHHHTTC---EECCHHHHGGGCSEEEECC--CCCTT---------TTTSBCHHHHTT
T ss_pred CCCCCEEECCCCCC--CH----HHHHHHCC---CHHHHHHHHHHCCEEEECC--CCCCC---------CCCHHHHHHHHH
T ss_conf 66898786678875--50----34555332---0434877653189999706--88532---------210322999985
Q ss_pred CCCCCEEECCCCCCCCCCCCHH
Q ss_conf 8987299259998748735767
Q gi|255764473|r 254 AHPDALFMHCLPAHRGEEVINE 275 (306)
Q Consensus 254 a~~~~~vmHplP~~rg~EI~~~ 275 (306)
+|+++++--+. ||.=|+.+
T Consensus 245 mk~ga~lIN~a---RG~iVde~ 263 (335)
T 2g76_A 245 CKKGVRVVNCA---RGGIVDEG 263 (335)
T ss_dssp SCTTEEEEECS---CTTSBCHH
T ss_pred CCCCCEEEECC---CCCCCCHH
T ss_conf 79998899716---87334679
No 33
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=95.40 E-value=0.087 Score=30.55 Aligned_cols=132 Identities=10% Similarity=0.074 Sum_probs=78.0
Q ss_pred HHHHCCCCCCEECCCCCCCHHH--HHHHHHHHHHHH--------------------C-CCCCCCCEEEECCCCCCCCCHH
Q ss_conf 7763012441240433320246--787655766420--------------------0-1336773046104555543101
Q gi|255764473|r 114 LELTEYATVPVINALTDNTHPC--QIIADIMTFEEH--------------------R-GSVKGKLFSWSGDGNNILHSLI 170 (306)
Q Consensus 114 ~~~~~~~~vpvINa~~~~~HPt--QaL~D~~Ti~e~--------------------~-g~l~~~~i~~vGd~~~v~hS~i 170 (306)
.+.++...|.|.|+-+...++. .+++=++.+.++ . ..+.|+++.++|- +++.....
T Consensus 129 l~aa~~~gI~V~n~~g~~~~sVAE~~i~liL~l~R~~~~~~~~~~~g~w~~~~~~~~~~~l~gk~vGIiG~-G~IG~~va 207 (393)
T 2nac_A 129 LQSAIDRNVTVAEVTYCNSISVAEHVVMMILSLVRNYLPSHEWARKGGWNIADCVSHAYDLEAMHVGTVAA-GRIGLAVL 207 (393)
T ss_dssp HHHHHHTTCEEEECTTTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCCTTCEEEEECC-SHHHHHHH
T ss_pred HHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECC-CCCCHHHH
T ss_conf 98898689999988984819999999999999986330889999808975233556542111537998767-20156899
Q ss_pred HCCCCCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCHHHHHHCCCCCCCCHHH
Q ss_conf 00123312576520000132100002432013322213664663068733222100000022013331001112336889
Q gi|255764473|r 171 EGAARFNYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFKAREEHVFQPFQVNLSL 250 (306)
Q Consensus 171 ~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~~~~~~~~~~y~i~~~~ 250 (306)
..+.-||+++....|....... .....+....++++.++.+|+|..-+ ....+ ...-+|.+.
T Consensus 208 ~~l~~fg~~V~~~d~~~~~~~~-------~~~~~~~~~~sl~ell~~sDvV~lh~--PLt~~---------T~~lin~~~ 269 (393)
T 2nac_A 208 RRLAPFDVHLHYTDRHRLPESV-------EKELNLTWHATREDMYPVCDVVTLNC--PLHPE---------TEHMINDET 269 (393)
T ss_dssp HHHGGGTCEEEEECSSCCCHHH-------HHHHTCEECSSHHHHGGGCSEEEECS--CCCTT---------TTTCBSHHH
T ss_pred HHHHCCCCEEEEEECCCCHHHH-------HHCCCCEEECCHHHHHHHCCEEEEEC--CCCCC---------CCCEECHHH
T ss_conf 9852158569997144673553-------21023023146888764156355505--78710---------157077899
Q ss_pred HHCCCCCCEEECCC
Q ss_conf 96289872992599
Q gi|255764473|r 251 MSMAHPDALFMHCL 264 (306)
Q Consensus 251 l~~a~~~~~vmHpl 264 (306)
++.+|+++++--..
T Consensus 270 l~~MK~ga~LIN~a 283 (393)
T 2nac_A 270 LKLFKRGAYIVNTA 283 (393)
T ss_dssp HTTSCTTEEEEECS
T ss_pred HHHCCCCCEEEECC
T ss_conf 97459997899736
No 34
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, protein structure initiative, midwest center for structural genomics; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=95.38 E-value=0.031 Score=33.47 Aligned_cols=97 Identities=13% Similarity=0.152 Sum_probs=71.3
Q ss_pred HHC-CCCCCCCEEEECCCCCCCCCHHHCCCCCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCC
Q ss_conf 200-1336773046104555543101001233125765200001321000024320133222136646630687332221
Q gi|255764473|r 146 EHR-GSVKGKLFSWSGDGNNILHSLIEGAARFNYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFTD 224 (306)
Q Consensus 146 e~~-g~l~~~~i~~vGd~~~v~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~~ 224 (306)
++. ..+.|.+++++|-+ ++....+..+..+|+++.++.... +....++..+.......++.+.++++|+|+..
T Consensus 149 ~~~~~~l~~~~v~viG~G-~~g~~~a~~l~~~g~~v~v~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~divi~~ 222 (300)
T 2rir_A 149 QHTDYTIHGSQVAVLGLG-RTGMTIARTFAALGANVKVGARSS-----AHLARITEMGLVPFHTDELKEHVKDIDICINT 222 (300)
T ss_dssp HTCSSCSTTSEEEEECCS-HHHHHHHHHHHHTTCEEEEEESSH-----HHHHHHHHTTCEEEEGGGHHHHSTTCSEEEEC
T ss_pred HHCCCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHHHCCCEEEEECCHHHHHCCCCEEEEE
T ss_conf 727966578889998887-889999999998799899996988-----87999997399379723367663268889960
Q ss_pred CEEECCCCCHHHHHHCCCCCCCCHHHHHCCCCCCEEECCC
Q ss_conf 0000002201333100111233688996289872992599
Q gi|255764473|r 225 TWISMNQEFKAREEHVFQPFQVNLSLMSMAHPDALFMHCL 264 (306)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~y~i~~~~l~~a~~~~~vmHpl 264 (306)
. ..-.++++.++..++++++.-+.
T Consensus 223 ~----------------p~~~i~~~~l~~m~~g~viiD~a 246 (300)
T 2rir_A 223 I----------------PSMILNQTVLSSMTPKTLILDLA 246 (300)
T ss_dssp C----------------SSCCBCHHHHTTSCTTCEEEECS
T ss_pred C----------------CCCEECHHHHHHCCCCCEEEEEC
T ss_conf 7----------------85101298996179996899957
No 35
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=95.26 E-value=0.036 Score=33.06 Aligned_cols=130 Identities=12% Similarity=0.084 Sum_probs=74.5
Q ss_pred HHHHCCCCCCEECCCCCCCHHH--HHHHHHHHHHHH----------------C-CCCCCCCEEEECCCCCCCCCHHHCCC
Q ss_conf 7763012441240433320246--787655766420----------------0-13367730461045555431010012
Q gi|255764473|r 114 LELTEYATVPVINALTDNTHPC--QIIADIMTFEEH----------------R-GSVKGKLFSWSGDGNNILHSLIEGAA 174 (306)
Q Consensus 114 ~~~~~~~~vpvINa~~~~~HPt--QaL~D~~Ti~e~----------------~-g~l~~~~i~~vGd~~~v~hS~i~~~~ 174 (306)
...++...++|.|+-+....+. ++++=++.+.++ . ..+.|++|.++|-+ ++.....+.+.
T Consensus 84 ~~~~~~~~i~v~~~~g~~~~~vaE~~~~~~l~l~r~~~~~~~~~~~g~~~~~~~~~L~gktvgIiG~G-~IG~~va~~l~ 162 (313)
T 2ekl_A 84 TEEAEKRNIKVVYAPGASTDSAVELTIGLMIAAARKMYTSMALAKSGIFKKIEGLELAGKTIGIVGFG-RIGTKVGIIAN 162 (313)
T ss_dssp HHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCCCTTCEEEEESCS-HHHHHHHHHHH
T ss_pred CHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCC-HHHHHHHHHHH
T ss_conf 10155437015637987719999999999998751437788875348855567766799999998979-89999999998
Q ss_pred CCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCHHHHHHCCCCCCCCHHHHHCC
Q ss_conf 33125765200001321000024320133222136646630687332221000000220133310011123368899628
Q gi|255764473|r 175 RFNYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFKAREEHVFQPFQVNLSLMSMA 254 (306)
Q Consensus 175 ~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~~~~~~~~~~y~i~~~~l~~a 254 (306)
.||+++....|..-. .. ... ......++++.++.+|+|..-. ....+ ..--+|.+.++..
T Consensus 163 ~fg~~v~~~~~~~~~--~~----~~~---~~~~~~~l~ell~~sDiv~~~~--plt~~---------T~~li~~~~l~~m 222 (313)
T 2ekl_A 163 AMGMKVLAYDILDIR--EK----AEK---INAKAVSLEELLKNSDVISLHV--TVSKD---------AKPIIDYPQFELM 222 (313)
T ss_dssp HTTCEEEEECSSCCH--HH----HHH---TTCEECCHHHHHHHCSEEEECC--CCCTT---------SCCSBCHHHHHHS
T ss_pred HCCCEEEEECCCCCH--HH----HCC---CCCCCCCHHHHHHHCCEEEECC--CCCCC---------CCCCCCHHHHHCC
T ss_conf 669868972687756--66----302---5655588999986499998526--33322---------3465375786321
Q ss_pred CCCCEEECCC
Q ss_conf 9872992599
Q gi|255764473|r 255 HPDALFMHCL 264 (306)
Q Consensus 255 ~~~~~vmHpl 264 (306)
|+++++--.+
T Consensus 223 k~~a~lIN~~ 232 (313)
T 2ekl_A 223 KDNVIIVNTS 232 (313)
T ss_dssp CTTEEEEESS
T ss_pred CCCCCEEECC
T ss_conf 5787144067
No 36
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=95.22 E-value=0.096 Score=30.26 Aligned_cols=90 Identities=14% Similarity=0.123 Sum_probs=55.2
Q ss_pred CCCCCCEEEECCCCCCCCCHHHCCCCCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEEC
Q ss_conf 33677304610455554310100123312576520000132100002432013322213664663068733222100000
Q gi|255764473|r 150 SVKGKLFSWSGDGNNILHSLIEGAARFNYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFTDTWISM 229 (306)
Q Consensus 150 ~l~~~~i~~vGd~~~v~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~ 229 (306)
.+.|+++.++|-++ +..-....+.-||+++....|.... .......++++.++.+|+|..-. .+
T Consensus 121 ~l~gk~vgIiG~G~-IG~~va~~l~~fg~~V~~~d~~~~~-------------~~~~~~~~l~~ll~~sDvv~~~~--Pl 184 (303)
T 1qp8_A 121 LIQGEKVAVLGLGE-IGTRVGKILAALGAQVRGFSRTPKE-------------GPWRFTNSLEEALREARAAVCAL--PL 184 (303)
T ss_dssp CCTTCEEEEESCST-HHHHHHHHHHHTTCEEEEECSSCCC-------------SSSCCBSCSHHHHTTCSEEEECC--CC
T ss_pred CCCCCEEEEEEECH-HHHHHHHHHHHCCCEEEEECCCCCC-------------CCCCCCCCHHHHHHCCCEEEECC--CC
T ss_conf 35899999990389-9999999887359779974488422-------------33323387999972579998616--79
Q ss_pred CCCCHHHHHHCCCCCCCCHHHHHCCCCCCEEECCC
Q ss_conf 02201333100111233688996289872992599
Q gi|255764473|r 230 NQEFKAREEHVFQPFQVNLSLMSMAHPDALFMHCL 264 (306)
Q Consensus 230 ~~~~~~~~~~~~~~y~i~~~~l~~a~~~~~vmHpl 264 (306)
..+ ...-++.+.++.+|+++++--.+
T Consensus 185 t~~---------T~~li~~~~l~~mk~ga~lIN~~ 210 (303)
T 1qp8_A 185 NKH---------TRGLVKYQHLALMAEDAVFVNVG 210 (303)
T ss_dssp STT---------TTTCBCHHHHTTSCTTCEEEECS
T ss_pred CHH---------CCCCCCHHHHHHHCCCEEEEEEC
T ss_conf 700---------05745888975101550799943
No 37
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=95.14 E-value=0.056 Score=31.81 Aligned_cols=136 Identities=15% Similarity=0.220 Sum_probs=76.4
Q ss_pred HHHCCCCCCEECCCCCCCHHH--HHHHHHHHHHHH------------------C-CCCCCCCEEEECCCCCCCCCHHHCC
Q ss_conf 763012441240433320246--787655766420------------------0-1336773046104555543101001
Q gi|255764473|r 115 ELTEYATVPVINALTDNTHPC--QIIADIMTFEEH------------------R-GSVKGKLFSWSGDGNNILHSLIEGA 173 (306)
Q Consensus 115 ~~~~~~~vpvINa~~~~~HPt--QaL~D~~Ti~e~------------------~-g~l~~~~i~~vGd~~~v~hS~i~~~ 173 (306)
+.++...|+|-|+-+....+. .+++=++++.+. . ..+.|+++.++|-+ ++.......+
T Consensus 78 ~~~~~~gI~v~n~~g~~~~~VAE~~l~~~L~~~R~~~~~~~~~~~~~~~~~~~~~~~l~gktvgIiG~G-~IG~~va~~l 156 (324)
T 3evt_A 78 KALQAAGVVVANTSGIHADAISESVLAAMLSVVRGYHAAWLNQRGARQWALPMTTSTLTGQQLLIYGTG-QIGQSLAAKA 156 (324)
T ss_dssp HHHHHTTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCSSCSSCCCCSTTCEEEEECCS-HHHHHHHHHH
T ss_pred HHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCEECCEEEEEEEC-HHHHHHHHHH
T ss_conf 999878968995187478999999999999998535288998750553336766653007889999055-2569998876
Q ss_pred CCCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCHHHHHHCCCCCCCCHHHHHC
Q ss_conf 23312576520000132100002432013322213664663068733222100000022013331001112336889962
Q gi|255764473|r 174 ARFNYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFKAREEHVFQPFQVNLSLMSM 253 (306)
Q Consensus 174 ~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~~~~~~~~~~y~i~~~~l~~ 253 (306)
..||+++....|..... ... . ......++.+.++.+|+|..-. ....+ ....+|.+.++.
T Consensus 157 ~~fg~~V~~~~~~~~~~-~~~-----~---~~~~~~~l~e~l~~sDiv~~~l--Plt~~---------T~~li~~~~~~~ 216 (324)
T 3evt_A 157 SALGMHVIGVNTTGHPA-DHF-----H---ETVAFTATADALATANFIVNAL--PLTPT---------THHLFSTELFQQ 216 (324)
T ss_dssp HHTTCEEEEEESSCCCC-TTC-----S---EEEEGGGCHHHHHHCSEEEECC--CCCGG---------GTTCBSHHHHHT
T ss_pred HCCCCEEECCCCCCCCC-CCH-----H---HCEEEEEHHHHCCCCEEEEECC--CCCCC---------CCCCCHHHHHHH
T ss_conf 22785564258863211-002-----2---0312431133214310256325--79700---------358637999753
Q ss_pred CCCCCEEECCCCCCCCCCCCH
Q ss_conf 898729925999874873576
Q gi|255764473|r 254 AHPDALFMHCLPAHRGEEVIN 274 (306)
Q Consensus 254 a~~~~~vmHplP~~rg~EI~~ 274 (306)
+|+++++.-.+ ||.=|+.
T Consensus 217 mk~~a~lIN~~---RG~vvde 234 (324)
T 3evt_A 217 TKQQPMLINIG---RGPAVDT 234 (324)
T ss_dssp CCSCCEEEECS---CGGGBCH
T ss_pred HCCCCCEEEEC---CCCEECH
T ss_conf 21354145413---6542389
No 38
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=95.14 E-value=0.18 Score=28.43 Aligned_cols=185 Identities=17% Similarity=0.187 Sum_probs=107.9
Q ss_pred CCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEE-CCCCCHHHHHH-HHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 17844589999999999999999665236665443798799994-28883578999-98986347543333210000123
Q gi|255764473|r 8 FADLSNISSSNLSCIIEVAKKIKNSSENIFENKPLSGKVLAMIF-EKPSTRTRVSF-EVAMKHLGGDTIFLSGSEMQLGR 85 (306)
Q Consensus 8 ~l~~~dl~~~~i~~ll~~A~~~k~~~~~~~~~~~l~gk~i~~lF-~e~StRTR~SF-e~A~~~LG~~~~~~~~~~ss~~k 85 (306)
+|+=+.+.++-...+-+....++.... . .| +..+.+. ..|..++.... +.+|.++|.++....-... ..
T Consensus 6 ildGk~vA~~i~~~l~~~v~~l~~~~~--~--~P---~LavIlvg~d~aS~~Yv~~k~k~a~~~Gi~~~~~~l~~~-~s- 76 (285)
T 3l07_A 6 LIDGKSLSKDLKERLATQVQEYKHHTA--I--TP---KLVAIIVGNDPASKTYVASKEKACAQVGIDSQVITLPEH-TT- 76 (285)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHHHC--C--CC---EEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTT-CC-
T ss_pred EEECHHHHHHHHHHHHHHHHHHHHCCC--C--CC---CEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCC-CC-
T ss_conf 986899999999999999999997059--9--97---279999589756799999999999974885899978999-88-
Q ss_pred CCCHHHHHHHHHHC--CCEEEEEECC--C---CHHHH-HHCCCC---CCEECCC-----CC-CCHHHHHHHHHHHHHHHC
Q ss_conf 21079999975300--1011121013--2---00677-630124---4124043-----33-202467876557664200
Q gi|255764473|r 86 AETIGDTAKVLSRY--VDAIVMRTTN--H---SRLLE-LTEYAT---VPVINAL-----TD-NTHPCQIIADIMTFEEHR 148 (306)
Q Consensus 86 gEsl~Dt~~~ls~~--~D~iviR~~~--~---~~~~~-~~~~~~---vpvINa~-----~~-~~HPtQaL~D~~Ti~e~~ 148 (306)
-|.+.+.++-|+.- +++|.+-.|- + ..+.. +.-..+ ..-.|.| .. ..-||-+++ ++.|.++.
T Consensus 77 ~~el~~~I~~LN~D~~V~GIivQlPlP~~~~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~~PcTp~a-v~~lL~~~ 155 (285)
T 3l07_A 77 ESELLELIDQLNNDSSVHAILVQLPLPAHINKNNVIYSIKPEKDVDGFHPTNVGRLQLRDKKCLESCTPKG-IMTMLREY 155 (285)
T ss_dssp HHHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHHHSCGGGBTTCCSHHHHHHHHHTCTTCCCCHHHHH-HHHHHHHT
T ss_pred HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHH-HHHHHHHH
T ss_conf 99999999999646786779960676556106889860495558454688887400247766788988999-99999995
Q ss_pred C-CCCCCCEEEECCCCCCCCCHHHCCCCCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCC
Q ss_conf 1-33677304610455554310100123312576520000132100002432013322213664663068733222
Q gi|255764473|r 149 G-SVKGKLFSWSGDGNNILHSLIEGAARFNYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFT 223 (306)
Q Consensus 149 g-~l~~~~i~~vGd~~~v~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~ 223 (306)
+ +++|++++++|..+-|..-+..++..-|+.+++|.-. +.++.+..+.||+|.+
T Consensus 156 ~i~l~Gk~vvVvGrS~iVG~Pla~lL~~~~atVt~~h~~---------------------t~~l~~~~~~ADIvIs 210 (285)
T 3l07_A 156 GIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF---------------------TTDLKSHTTKADILIV 210 (285)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT---------------------CSSHHHHHTTCSEEEE
T ss_pred CCCCCCCEEEEECCCCCCCHHHHHHHHCCCCEEEEEECC---------------------CCCHHHHHHHCCHHHH
T ss_conf 998679779998898756558999985589749998358---------------------9998998650676666
No 39
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP, oxidoreductase, PSI; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=95.12 E-value=0.18 Score=28.41 Aligned_cols=186 Identities=14% Similarity=0.103 Sum_probs=102.0
Q ss_pred CCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEE-CCCCCHHHHHH-HHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 17844589999999999999999665236665443798799994-28883578999-98986347543333210000123
Q gi|255764473|r 8 FADLSNISSSNLSCIIEVAKKIKNSSENIFENKPLSGKVLAMIF-EKPSTRTRVSF-EVAMKHLGGDTIFLSGSEMQLGR 85 (306)
Q Consensus 8 ~l~~~dl~~~~i~~ll~~A~~~k~~~~~~~~~~~l~gk~i~~lF-~e~StRTR~SF-e~A~~~LG~~~~~~~~~~ss~~k 85 (306)
+|+=+.+.++-...+-+....++.. +. .| +..+.++ ..|..++.... ..+|.++|..+......+. ..
T Consensus 5 ildGk~iA~~i~~~lk~~v~~l~~~---g~--~P---~Laiilvg~d~aS~~Yv~~k~k~~~~~Gi~~~~~~l~~~-~~- 74 (281)
T 2c2x_A 5 MLDGKATRDEIFGDLKQRVAALDAA---GR--TP---GLGTILVGDDPGSQAYVRGKHADCAKVGITSIRRDLPAD-IS- 74 (281)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHT---TC--CC---EEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTT-CC-
T ss_pred EEECHHHHHHHHHHHHHHHHHHHHC---CC--CC---EEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCC-CC-
T ss_conf 9450999999999999999999857---99--96---489999699878999999999999985997998526887-78-
Q ss_pred CCCHHHHHHHHHHC--CCEEEEEECC--C---CHHHH-HHCCCCC---CEECCC-----CCCCHHHHHHHHHHHHHHHCC
Q ss_conf 21079999975300--1011121013--2---00677-6301244---124043-----332024678765576642001
Q gi|255764473|r 86 AETIGDTAKVLSRY--VDAIVMRTTN--H---SRLLE-LTEYATV---PVINAL-----TDNTHPCQIIADIMTFEEHRG 149 (306)
Q Consensus 86 gEsl~Dt~~~ls~~--~D~iviR~~~--~---~~~~~-~~~~~~v---pvINa~-----~~~~HPtQaL~D~~Ti~e~~g 149 (306)
-|.+.+.++-++.- +++|.+-.|- + ..+.. +.-..++ .-.|.| .....||-+++=+--++++..
T Consensus 75 e~el~~~I~~lN~d~~v~GIlvqlPlP~~~~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcT~~ai~~lL~~~~i 154 (281)
T 2c2x_A 75 TATLNETIDELNANPDCTGYIVQLPLPKHLDENAALERVDPAKDADGLHPTNLGRLVLGTPAPLPCTPRGIVHLLRRYDI 154 (281)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEECSCCCTTSCHHHHHHHSCGGGBTTSCCHHHHHHHHHTCCCCCCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
T ss_conf 99999999998289865537885358654444120220273336565562466310246766688508999999999698
Q ss_pred CCCCCCEEEECCCCCCCCCHHHCCCCC--CEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCC
Q ss_conf 336773046104555543101001233--125765200001321000024320133222136646630687332221
Q gi|255764473|r 150 SVKGKLFSWSGDGNNILHSLIEGAARF--NYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFTD 224 (306)
Q Consensus 150 ~l~~~~i~~vGd~~~v~hS~i~~~~~~--g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~~ 224 (306)
.++|++++++|..+-|..=+..++... ++.+++|... +.++.+..+.||+|.+-
T Consensus 155 ~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~atvt~~h~~---------------------T~~l~~~~~~ADIvisa 210 (281)
T 2c2x_A 155 SIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTG---------------------TRDLPALTRQADIVVAA 210 (281)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTT---------------------CSCHHHHHTTCSEEEEC
T ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCC---------------------CCCHHHHHHHCCHHHHH
T ss_conf 876866899805875278999997454327806870788---------------------85779998728314433
No 40
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase family protein; structural genomics, protein structure initiative; 1.80A {Aeromonas salmonicida subsp}
Probab=94.97 E-value=0.059 Score=31.65 Aligned_cols=99 Identities=11% Similarity=0.098 Sum_probs=60.5
Q ss_pred HHHCCCCCCEECCCCCCCHHH--HHHHHHHHHHHHC-----------------CCCCCCCEEEECCCCCCCCCHHHCCCC
Q ss_conf 763012441240433320246--7876557664200-----------------133677304610455554310100123
Q gi|255764473|r 115 ELTEYATVPVINALTDNTHPC--QIIADIMTFEEHR-----------------GSVKGKLFSWSGDGNNILHSLIEGAAR 175 (306)
Q Consensus 115 ~~~~~~~vpvINa~~~~~HPt--QaL~D~~Ti~e~~-----------------g~l~~~~i~~vGd~~~v~hS~i~~~~~ 175 (306)
+.+...+|+|-|+-+...-+. .+++=++.+.+.. ..+.|+++.++|-+ ++.......+.-
T Consensus 83 ~~~~~~gI~v~n~~g~~a~~VAE~~l~~iL~l~R~~~~~~~~~~~~~W~~~~~~~l~gktvgIiG~G-~IG~~va~~l~~ 161 (324)
T 3hg7_A 83 DARCRRDYQLTNVRGIFGPLMSEYVFGHLLSLMRQLPLYREQQKQRLWQSHPYQGLKGRTLLILGTG-SIGQHIAHTGKH 161 (324)
T ss_dssp CTTSCCSSEEECCCSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCEEEEECCS-HHHHHHHHHHHH
T ss_pred HHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEE-ECCCHHHHCCCC
T ss_conf 6588789889968985639999999999999852155999998751245578777658888999665-055023102467
Q ss_pred CCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCC
Q ss_conf 312576520000132100002432013322213664663068733222
Q gi|255764473|r 176 FNYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFT 223 (306)
Q Consensus 176 ~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~ 223 (306)
||+++....+....... . .......++++.+..+|+|..
T Consensus 162 fg~~v~~~~~~~~~~~~-------~--~~~~~~~~l~~ll~~sD~v~l 200 (324)
T 3hg7_A 162 FGMKVLGVSRSGRERAG-------F--DQVYQLPALNKMLAQADVIVS 200 (324)
T ss_dssp TTCEEEEECSSCCCCTT-------C--SEEECGGGHHHHHHTCSEEEE
T ss_pred CCCEEECCCCCCCCCHH-------H--HCCCCCCCHHCCCCCCCCCEE
T ss_conf 67556403234332101-------1--013210001004445664312
No 41
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=94.88 E-value=0.085 Score=30.62 Aligned_cols=134 Identities=17% Similarity=0.175 Sum_probs=77.9
Q ss_pred HHHHCCCCCCEECCCCCCCHHH--HHHHHHHHHHHH-------------------C-CCCCCCCEEEECCCCCCCCCHHH
Q ss_conf 7763012441240433320246--787655766420-------------------0-13367730461045555431010
Q gi|255764473|r 114 LELTEYATVPVINALTDNTHPC--QIIADIMTFEEH-------------------R-GSVKGKLFSWSGDGNNILHSLIE 171 (306)
Q Consensus 114 ~~~~~~~~vpvINa~~~~~HPt--QaL~D~~Ti~e~-------------------~-g~l~~~~i~~vGd~~~v~hS~i~ 171 (306)
.+.++.-.|+|.|+-+....++ .+++=++.+.++ . ..+.|+++.++|-+ ++......
T Consensus 103 ~~~~~~~gI~V~n~pg~~~~~VAE~al~liLal~R~~~~~~~~~~~~~~~~~~~~~~~~l~gk~vgIiG~G-~IG~~va~ 181 (333)
T 3ba1_A 103 LIKCEEKGVRVTNTPDVLTDDVADLAIGLILAVLRRICECDKYVRRGAWKFGDFKLTTKFSGKRVGIIGLG-RIGLAVAE 181 (333)
T ss_dssp HHHHHHHTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTGGGGCCCCCCCCCTTCCEEEECCS-HHHHHHHH
T ss_pred HHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCEECCCEEEEECCC-HHHHHHHH
T ss_conf 88898689789708986789999999999998740224555554216645355545542359999998818-89999999
Q ss_pred CCCCCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCHHHHHHCCCCCCCCHHHH
Q ss_conf 01233125765200001321000024320133222136646630687332221000000220133310011123368899
Q gi|255764473|r 172 GAARFNYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFKAREEHVFQPFQVNLSLM 251 (306)
Q Consensus 172 ~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~~~~~~~~~~y~i~~~~l 251 (306)
.+..||+.+....|....- .......++.+.++.+|+|..-. ....+ ...-+|.+.+
T Consensus 182 ~~~~fg~~v~~~~~~~~~~------------~~~~~~~~l~ell~~sDvi~l~~--Plt~~---------T~~li~~~~l 238 (333)
T 3ba1_A 182 RAEAFDCPISYFSRSKKPN------------TNYTYYGSVVELASNSDILVVAC--PLTPE---------TTHIINREVI 238 (333)
T ss_dssp HHHTTTCCEEEECSSCCTT------------CCSEEESCHHHHHHTCSEEEECS--CCCGG---------GTTCBCHHHH
T ss_pred HHHCCCCEEEEECCCCCHH------------HCCCCCCCHHHHHCCCCEEEEEC--CCCCC---------HHHHCCHHHH
T ss_conf 8743697798640456622------------21343430333203399999918--99730---------3333169999
Q ss_pred HCCCCCCEEECCCCCCCCCCCCH
Q ss_conf 62898729925999874873576
Q gi|255764473|r 252 SMAHPDALFMHCLPAHRGEEVIN 274 (306)
Q Consensus 252 ~~a~~~~~vmHplP~~rg~EI~~ 274 (306)
+.+|+++++--.. ||.=|+.
T Consensus 239 ~~mk~~a~lIN~a---RG~iVde 258 (333)
T 3ba1_A 239 DALGPKGVLINIG---RGPHVDE 258 (333)
T ss_dssp HHHCTTCEEEECS---CGGGBCH
T ss_pred HHHCCCCEEEEEC---CCCCCCH
T ss_conf 8625534489834---7644578
No 42
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosynthesis, structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=94.83 E-value=0.097 Score=30.22 Aligned_cols=138 Identities=19% Similarity=0.208 Sum_probs=84.1
Q ss_pred HHHHCCCCCCEECCCCCCCHHH--HHHHHHHHHHHH-----------------C-C-CCCCCCEEEECCCCCCCCCHHHC
Q ss_conf 7763012441240433320246--787655766420-----------------0-1-33677304610455554310100
Q gi|255764473|r 114 LELTEYATVPVINALTDNTHPC--QIIADIMTFEEH-----------------R-G-SVKGKLFSWSGDGNNILHSLIEG 172 (306)
Q Consensus 114 ~~~~~~~~vpvINa~~~~~HPt--QaL~D~~Ti~e~-----------------~-g-~l~~~~i~~vGd~~~v~hS~i~~ 172 (306)
.+.+....|+|.|+-+....+. .+++=++.+.++ + + .+.|+++.++|-+ ++.......
T Consensus 82 ~~~a~~~gI~V~n~p~~~~~~vAE~~i~l~L~l~R~i~~~~~~~~~g~w~~~~~~~~~L~gktvGIiG~G-~IG~~va~~ 160 (529)
T 1ygy_A 82 VDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGKTVGVVGLG-RIGQLVAQR 160 (529)
T ss_dssp HHHHHHTTCEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCGGGCCBCCCTTCEEEEECCS-HHHHHHHHH
T ss_pred HHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCC-CHHHHHHHH
T ss_conf 8879868999998898787999999999999987636899888861872002556631368789997647-268999999
Q ss_pred CCCCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCHHHHHHCCCCCCCCHHHHH
Q ss_conf 12331257652000013210000243201332221366466306873322210000002201333100111233688996
Q gi|255764473|r 173 AARFNYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFKAREEHVFQPFQVNLSLMS 252 (306)
Q Consensus 173 ~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~~~~~~~~~~y~i~~~~l~ 252 (306)
+.-||+++....|... + ......|.. ..++++.++.+|+|..-. ....+ ...-++.+.++
T Consensus 161 ~~~fgm~v~~~d~~~~--~----~~~~~~~~~---~~~l~ell~~sD~v~lh~--Plt~~---------T~~li~~~~~~ 220 (529)
T 1ygy_A 161 IAAFGAYVVAYDPYVS--P----ARAAQLGIE---LLSLDDLLARADFISVHL--PKTPE---------TAGLIDKEALA 220 (529)
T ss_dssp HHTTTCEEEEECTTSC--H----HHHHHHTCE---ECCHHHHHHHCSEEEECC--CCSTT---------TTTCBCHHHHT
T ss_pred HHCCCCEEEEECCCCC--C----CHHHHCCCC---CCCHHHHHHHCCEEEEEC--CCCCC---------CCCCCCHHHHH
T ss_conf 7467977999448744--3----302223722---167999984499999907--99853---------31510799995
Q ss_pred CCCCCCEEECCCCCCCCCCCCHH
Q ss_conf 28987299259998748735767
Q gi|255764473|r 253 MAHPDALFMHCLPAHRGEEVINE 275 (306)
Q Consensus 253 ~a~~~~~vmHplP~~rg~EI~~~ 275 (306)
++|+++++.-+. ||.=|+.+
T Consensus 221 ~mK~ga~lIN~a---RG~iVde~ 240 (529)
T 1ygy_A 221 KTKPGVIIVNAA---RGGLVDEA 240 (529)
T ss_dssp TSCTTEEEEECS---CTTSBCHH
T ss_pred HCCCCCEEEECC---CCCEECHH
T ss_conf 258998687414---66557599
No 43
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=94.64 E-value=0.25 Score=27.59 Aligned_cols=189 Identities=11% Similarity=0.111 Sum_probs=106.8
Q ss_pred CCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEE-CCCCCHHHHHH-HHHHHHCCCCCCCCCCCCCCC
Q ss_conf 7717844589999999999999999665236665443798799994-28883578999-989863475433332100001
Q gi|255764473|r 6 KHFADLSNISSSNLSCIIEVAKKIKNSSENIFENKPLSGKVLAMIF-EKPSTRTRVSF-EVAMKHLGGDTIFLSGSEMQL 83 (306)
Q Consensus 6 k~~l~~~dl~~~~i~~ll~~A~~~k~~~~~~~~~~~l~gk~i~~lF-~e~StRTR~SF-e~A~~~LG~~~~~~~~~~ss~ 83 (306)
-.+|+=+.+..+-...+-+....++.... +. .| +..+.++ ..|+.++...- ..+|.++|.++..+.-... .
T Consensus 4 a~ildGk~iA~~i~~~ik~~v~~l~~~~~-g~--~P---~LavIlvg~d~aS~~Yv~~K~k~~~~~GI~~~~~~l~~~-~ 76 (301)
T 1a4i_A 4 AEILNGKEISAQIRARLKNQVTQLKEQVP-GF--TP---RLAILQVGNRDDSNLYINVKLKAAEEIGIKATHIKLPRT-T 76 (301)
T ss_dssp CEECCHHHHHHHHHHHHHHHHHHHHHHST-TC--CC---EEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTT-C
T ss_pred CEEEEHHHHHHHHHHHHHHHHHHHHHHCC-CC--CC---EEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCC-C
T ss_conf 77604599999999999999999998558-99--96---389999699765799999999999985995999977764-3
Q ss_pred CCCCCHHHHHHHHHHC--CCEEEEEEC--CC-----CHHH-HHHCCCCC---CEECCCC-------CCCHHHHHHHHHHH
Q ss_conf 2321079999975300--101112101--32-----0067-76301244---1240433-------32024678765576
Q gi|255764473|r 84 GRAETIGDTAKVLSRY--VDAIVMRTT--NH-----SRLL-ELTEYATV---PVINALT-------DNTHPCQIIADIMT 143 (306)
Q Consensus 84 ~kgEsl~Dt~~~ls~~--~D~iviR~~--~~-----~~~~-~~~~~~~v---pvINa~~-------~~~HPtQaL~D~~T 143 (306)
.-|.+.+.++-++.- +++|.+-.| .+ ..+. .+.-..++ .-.|.|- ...-||-+++=+--
T Consensus 77 -~e~el~~~I~~lN~d~~v~GIiVqlPlP~~~~~d~~~i~~~I~p~KDVDGl~~~N~g~l~~g~~~~~~~PcTp~av~~l 155 (301)
T 1a4i_A 77 -TESEVMKYITSLNEDSTVHGFLVQLPLDSENSINTEEVINAIAPEKDVDGLTSINAGRLARGDLNDCFIPCTPKGCLEL 155 (301)
T ss_dssp -CHHHHHHHHHHHHHCTTCCEEEECSSCCCSSCCCHHHHHHTSCGGGBTTCCSHHHHHHHHTTCCSSCCCCHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHH
T ss_conf -3999999999871577522046641488878859899985579666756556304668760887777566566999999
Q ss_pred HHHHCCCCCCCCEEEECCCCCCCCCHHHCCCCCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCC
Q ss_conf 64200133677304610455554310100123312576520000132100002432013322213664663068733222
Q gi|255764473|r 144 FEEHRGSVKGKLFSWSGDGNNILHSLIEGAARFNYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFT 223 (306)
Q Consensus 144 i~e~~g~l~~~~i~~vGd~~~v~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~ 223 (306)
+.++.-.++|++++++|..+-|..=+..++..-|+.+++|.-.. .++.+..+.||++.+
T Consensus 156 L~~y~i~l~GK~vvViGrS~iVG~Pla~ll~~~~atVt~~hs~t---------------------~~l~~~~~~ADIvis 214 (301)
T 1a4i_A 156 IKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT---------------------AHLDEEVNKGDILVV 214 (301)
T ss_dssp HHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC---------------------SSHHHHHTTCSEEEE
T ss_pred HHHHCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEEECCC---------------------CHHHHHCCCCCEEEE
T ss_conf 99859882474579973045444789999752797699985898---------------------500430445778861
No 44
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=94.56 E-value=0.15 Score=28.95 Aligned_cols=137 Identities=17% Similarity=0.166 Sum_probs=82.2
Q ss_pred HHHHHCCCCCCEECCCCCCCHHH--HHHHHHHHHHHH-----------------C-C-CCCCCCEEEECCCCCCCCCHHH
Q ss_conf 67763012441240433320246--787655766420-----------------0-1-3367730461045555431010
Q gi|255764473|r 113 LLELTEYATVPVINALTDNTHPC--QIIADIMTFEEH-----------------R-G-SVKGKLFSWSGDGNNILHSLIE 171 (306)
Q Consensus 113 ~~~~~~~~~vpvINa~~~~~HPt--QaL~D~~Ti~e~-----------------~-g-~l~~~~i~~vGd~~~v~hS~i~ 171 (306)
-.+.++...|+|.|+-+....+. .+++=++.+.+. + + .+.|+++.++|- +++......
T Consensus 84 d~~~a~~~GI~V~n~pg~n~~aVaE~~l~l~l~~~R~~~~~~~~~~~~~w~~~~~~~~el~gktlgIiG~-G~IG~~va~ 162 (404)
T 1sc6_A 84 DLDAAAKRGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVGNKLAAGSFEARGKKLGIIGY-GHIGTQLGI 162 (404)
T ss_dssp CHHHHHHTTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC-----CCCSTTCEEEEECC-SHHHHHHHH
T ss_pred HCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECC-CCCCHHHHH
T ss_conf 0030103320146315754441167887754211001355555654276322356554443036899503-331033331
Q ss_pred CCCCCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCHHHHHHCCCCCCCCHHHH
Q ss_conf 01233125765200001321000024320133222136646630687332221000000220133310011123368899
Q gi|255764473|r 172 GAARFNYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFKAREEHVFQPFQVNLSLM 251 (306)
Q Consensus 172 ~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~~~~~~~~~~y~i~~~~l 251 (306)
.+..||+++....|..-.+. .......++++.++.+|+|..-. ...++ ..-.++.+.+
T Consensus 163 ~~~~~gm~V~~~d~~~~~~~-----------~~~~~~~~l~ell~~sDiVslh~--Plt~~---------T~~lin~~~l 220 (404)
T 1sc6_A 163 LAESLGMYVYFYDIENKLPL-----------GNATQVQHLSDLLNMSDVVSLHV--PENPS---------TKNMMGAKEI 220 (404)
T ss_dssp HHHHTTCEEEEECSSCCCCC-----------TTCEECSCHHHHHHHCSEEEECC--CSSTT---------TTTCBCHHHH
T ss_pred HCCCCCCEEEECCCCCCCCC-----------CCCEECCHHHHHHHHCCEEEECC--CCCCC---------CCCHHHHHHH
T ss_conf 00345736863244465311-----------35311030555452287999727--88856---------6351589999
Q ss_pred HCCCCCCEEECCCCCCCCCCCCHH
Q ss_conf 628987299259998748735767
Q gi|255764473|r 252 SMAHPDALFMHCLPAHRGEEVINE 275 (306)
Q Consensus 252 ~~a~~~~~vmHplP~~rg~EI~~~ 275 (306)
+++|+++++.-+. ||.=|+.+
T Consensus 221 ~~mK~gailIN~a---RG~iVde~ 241 (404)
T 1sc6_A 221 SLMKPGSLLINAS---RGTVVDIP 241 (404)
T ss_dssp HHSCTTEEEEECS---CSSSBCHH
T ss_pred HHCCCCCEEEECC---CCCEECHH
T ss_conf 7469986999437---77656589
No 45
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus HB8}
Probab=94.55 E-value=0.15 Score=28.92 Aligned_cols=89 Identities=16% Similarity=0.140 Sum_probs=55.9
Q ss_pred CCCCCCEEEECCCCCCCCCHHHCCCCCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEEC
Q ss_conf 33677304610455554310100123312576520000132100002432013322213664663068733222100000
Q gi|255764473|r 150 SVKGKLFSWSGDGNNILHSLIEGAARFNYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFTDTWISM 229 (306)
Q Consensus 150 ~l~~~~i~~vGd~~~v~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~ 229 (306)
.+.|+++.++|-+ ++.......+..||+++....|..- ..+ ....++++.++.+|+|..-. ..
T Consensus 141 ~l~gk~vgIiG~G-~IG~~~a~~l~~fg~~v~~~~~~~~-----------~~~---~~~~~l~ell~~sDiv~~~~--pl 203 (311)
T 2cuk_A 141 DLQGLTLGLVGMG-RIGQAVAKRALAFGMRVVYHARTPK-----------PLP---YPFLSLEELLKEADVVSLHT--PL 203 (311)
T ss_dssp CCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSCC-----------SSS---SCBCCHHHHHHHCSEEEECC--CC
T ss_pred CCCCCEEEEEEEC-HHHHHHHHHHHHCCCEEEEECCCCC-----------CCC---CCCCCHHHHHHHCCEEEECC--CC
T ss_conf 2469989998078-8999999999858998999889844-----------468---76679999997699999938--89
Q ss_pred CCCCHHHHHHCCCCCCCCHHHHHCCCCCCEEECCC
Q ss_conf 02201333100111233688996289872992599
Q gi|255764473|r 230 NQEFKAREEHVFQPFQVNLSLMSMAHPDALFMHCL 264 (306)
Q Consensus 230 ~~~~~~~~~~~~~~y~i~~~~l~~a~~~~~vmHpl 264 (306)
..+ ....++.+.++.+|+++++.-..
T Consensus 204 t~~---------t~~li~~~~l~~mk~~a~liN~~ 229 (311)
T 2cuk_A 204 TPE---------THRLLNRERLFAMKRGAILLNTA 229 (311)
T ss_dssp CTT---------TTTCBCHHHHTTSCTTCEEEECS
T ss_pred CHH---------HCCCCCHHHHHHCCCCEEEEECC
T ss_conf 847---------62774899997419984999778
No 46
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=94.05 E-value=0.13 Score=29.41 Aligned_cols=93 Identities=12% Similarity=0.111 Sum_probs=59.3
Q ss_pred CCCCCCEEEECCCCCCCCCHHHCCCCCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEEC
Q ss_conf 33677304610455554310100123312576520000132100002432013322213664663068733222100000
Q gi|255764473|r 150 SVKGKLFSWSGDGNNILHSLIEGAARFNYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFTDTWISM 229 (306)
Q Consensus 150 ~l~~~~i~~vGd~~~v~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~ 229 (306)
.+.|+++.++|-+ ++.......+.-||+++....|.. . +.. ...+ ....++++.++.+|+|..-. ..
T Consensus 143 ~l~gk~vgIiG~G-~IG~~va~~l~~fg~~V~~~d~~~--~-~~~----~~~~---~~~~~l~~ll~~aDiv~~~l--Pl 209 (333)
T 1j4a_A 143 EVRDQVVGVVGTG-HIGQVFMQIMEGFGAKVITYDIFR--N-PEL----EKKG---YYVDSLDDLYKQADVISLHV--PD 209 (333)
T ss_dssp CGGGSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSC--C-HHH----HHTT---CBCSCHHHHHHHCSEEEECS--CC
T ss_pred EECCCEEEEEECC-CCCHHHHHHHCCCCCCEEEECCCC--C-CCH----HCCC---CCCCCHHHHHHHCCEEEEEC--CC
T ss_conf 4028889999246-514748876336677011007877--7-102----1056---00387999986499899916--89
Q ss_pred CCCCHHHHHHCCCCCCCCHHHHHCCCCCCEEECCC
Q ss_conf 02201333100111233688996289872992599
Q gi|255764473|r 230 NQEFKAREEHVFQPFQVNLSLMSMAHPDALFMHCL 264 (306)
Q Consensus 230 ~~~~~~~~~~~~~~y~i~~~~l~~a~~~~~vmHpl 264 (306)
..+ ...-++.+.++.+|+++++.-..
T Consensus 210 t~~---------T~~li~~~~~~~mk~~a~lIN~a 235 (333)
T 1j4a_A 210 VPA---------NVHMINDESIAKMKQDVVIVNVS 235 (333)
T ss_dssp CGG---------GTTCBSHHHHHHSCTTEEEEECS
T ss_pred CCC---------HHCEECHHHHHHCCCCCEEEECC
T ss_conf 851---------12010599995258998899854
No 47
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenase, oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=93.96 E-value=0.23 Score=27.78 Aligned_cols=136 Identities=10% Similarity=0.063 Sum_probs=79.8
Q ss_pred HHHHCCCCCCEECCCCCCCHHH--HHHHHHHHHHHH-------------------C-CCCCCCCEEEECCCCCCCCCHHH
Q ss_conf 7763012441240433320246--787655766420-------------------0-13367730461045555431010
Q gi|255764473|r 114 LELTEYATVPVINALTDNTHPC--QIIADIMTFEEH-------------------R-GSVKGKLFSWSGDGNNILHSLIE 171 (306)
Q Consensus 114 ~~~~~~~~vpvINa~~~~~HPt--QaL~D~~Ti~e~-------------------~-g~l~~~~i~~vGd~~~v~hS~i~ 171 (306)
.+.++..+|+|.|+-+....+. .+++=++.+.+. . ..+.|+++.++|-+ ++......
T Consensus 84 ~~~~~~~gI~v~n~~g~~a~aVAE~~l~~iL~l~R~~~~~~~~~~~g~~~~~~~~~~~~L~gk~vgI~G~G-~iG~~~a~ 162 (333)
T 1dxy_A 84 MTAMKQYGIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGTFIGKELGQQTVGVMGTG-HIGQVAIK 162 (333)
T ss_dssp HHHHHHTTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHHHHTCCCCCCGGGSEEEEECCS-HHHHHHHH
T ss_pred HHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCC-CCCHHHHH
T ss_conf 88996298799979984837899999999998754048999987616544556656511468778884677-64647777
Q ss_pred CCCCCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCHHHHHHCCCCCCCCHHHH
Q ss_conf 01233125765200001321000024320133222136646630687332221000000220133310011123368899
Q gi|255764473|r 172 GAARFNYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFKAREEHVFQPFQVNLSLM 251 (306)
Q Consensus 172 ~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~~~~~~~~~~y~i~~~~l 251 (306)
.+.-||+++....|...... .......++++.++.+|+|..-. ....+ ....++.+.+
T Consensus 163 ~~~~fg~~V~~~~~~~~~~~-----------~~~~~~~~l~~l~~~~Dvv~~~~--plt~~---------T~~li~~~~l 220 (333)
T 1dxy_A 163 LFKGFGAKVIAYDPYPMKGD-----------HPDFDYVSLEDLFKQSDVIDLHV--PGIEQ---------NTHIINEAAF 220 (333)
T ss_dssp HHHHTTCEEEEECSSCCSSC-----------CTTCEECCHHHHHHHCSEEEECC--CCCGG---------GTTSBCHHHH
T ss_pred HHCCCCCEEEEECCCCCCCC-----------CCEEEEEEHHHHHCCCCEEEEEC--CCCCC---------CCHHHCHHHH
T ss_conf 76038987998605423453-----------32134423565630455466406--87677---------5113279999
Q ss_pred HCCCCCCEEECCCCCCCCCCCCHH
Q ss_conf 628987299259998748735767
Q gi|255764473|r 252 SMAHPDALFMHCLPAHRGEEVINE 275 (306)
Q Consensus 252 ~~a~~~~~vmHplP~~rg~EI~~~ 275 (306)
+.+|+++++.-.. ||.=|+.+
T Consensus 221 ~~mk~ga~lIN~a---RG~lvde~ 241 (333)
T 1dxy_A 221 NLMKPGAIVINTA---RPNLIDTQ 241 (333)
T ss_dssp HHSCTTEEEEECS---CTTSBCHH
T ss_pred HHCCCCCEEEECC---CCCEECHH
T ss_conf 6355784798515---77468679
No 48
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=93.32 E-value=0.15 Score=28.95 Aligned_cols=135 Identities=11% Similarity=0.123 Sum_probs=76.4
Q ss_pred HHHCCCCCCEECCCCCCCHHH--HHHHHHHHHHHH-------------------C-CCCCCCCEEEECCCCCCCCCHHHC
Q ss_conf 763012441240433320246--787655766420-------------------0-133677304610455554310100
Q gi|255764473|r 115 ELTEYATVPVINALTDNTHPC--QIIADIMTFEEH-------------------R-GSVKGKLFSWSGDGNNILHSLIEG 172 (306)
Q Consensus 115 ~~~~~~~vpvINa~~~~~HPt--QaL~D~~Ti~e~-------------------~-g~l~~~~i~~vGd~~~v~hS~i~~ 172 (306)
+......++|.|+-+...-++ .+|+=++.+.++ . ..+.|+++.++| .+++.......
T Consensus 81 ~~~~~~gI~v~n~~g~~~~~vAE~~l~~il~~~r~l~~~~~~~~~~~~~~~~~~~~~~l~g~~vgIiG-~G~IG~~~a~~ 159 (334)
T 2pi1_A 81 DYCKKKGILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARELNRLTLGVIG-TGRIGSRVAMY 159 (334)
T ss_dssp HHHHHHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCGGGCBCCGGGSEEEEEC-CSHHHHHHHHH
T ss_pred HHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCEEEEEC-CCHHHHHHHHH
T ss_conf 58873991899579858089999999998887523310022112355322234344210586899986-89899999998
Q ss_pred CCCCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCHHHHHHCCCCCCCCHHHHH
Q ss_conf 12331257652000013210000243201332221366466306873322210000002201333100111233688996
Q gi|255764473|r 173 AARFNYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFKAREEHVFQPFQVNLSLMS 252 (306)
Q Consensus 173 ~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~~~~~~~~~~y~i~~~~l~ 252 (306)
+..||+.+....+..- + .....+ ....++++.++.+|+|..-. ....+ ..--++.+.++
T Consensus 160 l~~~g~~v~~~~~~~~---~----~~~~~~---~~~~~l~ell~~sDiv~~~l--Plt~~---------T~~li~~~~~~ 218 (334)
T 2pi1_A 160 GLAFGMKVLCYDVVKR---E----DLKEKG---CVYTSLDELLKESDVISLHV--PYTKE---------THHMINEERIS 218 (334)
T ss_dssp HHHTTCEEEEECSSCC---H----HHHHTT---CEECCHHHHHHHCSEEEECC--CCCTT---------TTTCBCHHHHH
T ss_pred HHHCCCEEEEECCCCC---H----HHHHCC---CEECCHHHHHHHCCEEEECC--CCCHH---------HCCCCCHHHHH
T ss_conf 7745857999878651---1----245338---25448999985489789847--89825---------40676999997
Q ss_pred CCCCCCEEECCCCCCCCCCCCH
Q ss_conf 2898729925999874873576
Q gi|255764473|r 253 MAHPDALFMHCLPAHRGEEVIN 274 (306)
Q Consensus 253 ~a~~~~~vmHplP~~rg~EI~~ 274 (306)
.+|+++++--.+ ||.=|+.
T Consensus 219 ~mk~~a~lIN~a---RG~iVde 237 (334)
T 2pi1_A 219 LMKDGVYLINTA---RGKVVDT 237 (334)
T ss_dssp HSCTTEEEEECS---CGGGBCH
T ss_pred HCCCCCEEEECC---CCCEECH
T ss_conf 369997898557---7750289
No 49
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=93.09 E-value=0.31 Score=26.93 Aligned_cols=132 Identities=11% Similarity=0.139 Sum_probs=72.8
Q ss_pred HHHHCCCCCCEECCCCCCCHHHH--HHHHHHHHHHH--------------------------CCCCCCCCEEEECCCCCC
Q ss_conf 77630124412404333202467--87655766420--------------------------013367730461045555
Q gi|255764473|r 114 LELTEYATVPVINALTDNTHPCQ--IIADIMTFEEH--------------------------RGSVKGKLFSWSGDGNNI 165 (306)
Q Consensus 114 ~~~~~~~~vpvINa~~~~~HPtQ--aL~D~~Ti~e~--------------------------~g~l~~~~i~~vGd~~~v 165 (306)
.+.++.-.|+|.|+-+....++= +|+=++.+.+. -..+.|+++.++|-++ +
T Consensus 96 ~~~~~~~gI~v~n~~~~~~~~VAE~~l~liL~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~l~g~tvGIiG~G~-I 174 (348)
T 2w2k_A 96 LDALNERGVAFANSRGAGDTATSDLALYLILSVFRLASYSERAARTGDPETFNRVHLEIGKSAHNPRGHVLGAVGLGA-I 174 (348)
T ss_dssp HHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHTTCCHHHHHHHHHHHHTTCCCSTTCEEEEECCSH-H
T ss_pred HHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCEEEEECCCC-C
T ss_conf 999986993899789878347999999999985311156666644166432320100035443345466899978666-3
Q ss_pred CCCHHHCCCC-CCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCHHHHHHCCCCC
Q ss_conf 4310100123-312576520000132100002432013322213664663068733222100000022013331001112
Q gi|255764473|r 166 LHSLIEGAAR-FNYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFKAREEHVFQPF 244 (306)
Q Consensus 166 ~hS~i~~~~~-~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~~~~~~~~~~y 244 (306)
.......+.. +|+++....+....+..+ .. .......++++.++.+|+|..-. ....+ ...
T Consensus 175 G~~~a~~~~~~~g~~v~~~~~~~~~~~~~-----~~--~~~~~~~~l~~ll~~sDiv~l~~--plt~~---------T~~ 236 (348)
T 2w2k_A 175 QKEIARKAVHGLGMKLVYYDVAPADAETE-----KA--LGAERVDSLEELARRSDCVSVSV--PYMKL---------THH 236 (348)
T ss_dssp HHHHHHHHHHTTCCEEEEECSSCCCHHHH-----HH--HTCEECSSHHHHHHHCSEEEECC--CCSGG---------GTT
T ss_pred CHHHHHHHHHCCCEEEEEECCCCCCCHHH-----HC--CCCEEECCHHHHHHHCCEEEEEC--CCCCC---------HHH
T ss_conf 16767767742660799964741000124-----30--37455267999963177555506--78522---------055
Q ss_pred CCCHHHHHCCCCCCEEECCC
Q ss_conf 33688996289872992599
Q gi|255764473|r 245 QVNLSLMSMAHPDALFMHCL 264 (306)
Q Consensus 245 ~i~~~~l~~a~~~~~vmHpl 264 (306)
-++.+.++.+|+++++--..
T Consensus 237 li~~~~l~~mk~ga~lIN~a 256 (348)
T 2w2k_A 237 LIDEAFFAAMKPGSRIVNTA 256 (348)
T ss_dssp CBCHHHHHHSCTTEEEEECS
T ss_pred HHHHHHHHHHCCCCEEEEEC
T ss_conf 77776865403685689713
No 50
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infectious disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=92.90 E-value=0.44 Score=25.93 Aligned_cols=135 Identities=18% Similarity=0.184 Sum_probs=75.1
Q ss_pred HHHHCCCCCCEECCCCCCCHHH--HHHHHHHHHHHHC------------------C-CCCCCCEEEECCCCCCCCCHHHC
Q ss_conf 7763012441240433320246--7876557664200------------------1-33677304610455554310100
Q gi|255764473|r 114 LELTEYATVPVINALTDNTHPC--QIIADIMTFEEHR------------------G-SVKGKLFSWSGDGNNILHSLIEG 172 (306)
Q Consensus 114 ~~~~~~~~vpvINa~~~~~HPt--QaL~D~~Ti~e~~------------------g-~l~~~~i~~vGd~~~v~hS~i~~ 172 (306)
.+.++.-.++|.|+-+....+. .+++=++.+.+.. + .+.++++.++|-++ +..-....
T Consensus 96 ~~~~~~~gI~V~n~pg~na~aVAE~~i~~iL~l~R~i~~~~~~~~~~~w~~~~~~~~~l~~k~~giiG~G~-iG~~va~~ 174 (416)
T 3k5p_A 96 LKAARKRGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEKTAIGSREVRGKTLGIVGYGN-IGSQVGNL 174 (416)
T ss_dssp HHHHHHTTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTCCCSTTCEEEEECCSH-HHHHHHHH
T ss_pred HHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCEEEEEEECCC-CCCEEEEE
T ss_conf 99899789799976986622899999999886531025665454317711036676240460899981266-42111231
Q ss_pred CCCCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCHHHHHHCCCCCCCCHHHHH
Q ss_conf 12331257652000013210000243201332221366466306873322210000002201333100111233688996
Q gi|255764473|r 173 AARFNYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFKAREEHVFQPFQVNLSLMS 252 (306)
Q Consensus 173 ~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~~~~~~~~~~y~i~~~~l~ 252 (306)
+..||+.+....|...... ..+....++++.++.+|+|..-. ....+ ...-++.+.++
T Consensus 175 ~~~~g~~v~~~~~~~~~~~-----------~~~~~~~~L~ell~~sDiIslh~--Plt~~---------T~~lIn~~~l~ 232 (416)
T 3k5p_A 175 AESLGMTVRYYDTSDKLQY-----------GNVKPAASLDELLKTSDVVSLHV--PSSKS---------TSKLITEAKLR 232 (416)
T ss_dssp HHHTTCEEEEECTTCCCCB-----------TTBEECSSHHHHHHHCSEEEECC--CC--------------CCBCHHHHH
T ss_pred CCCCCCEEEEECCCCCCHH-----------CCEEECCCHHHHHHHCCEEEECC--CCCCC---------CCCHHHHHHHH
T ss_conf 0135515776316544010-----------23121489999975288888714--53002---------32666899995
Q ss_pred CCCCCCEEECCCCCCCCCCCCH
Q ss_conf 2898729925999874873576
Q gi|255764473|r 253 MAHPDALFMHCLPAHRGEEVIN 274 (306)
Q Consensus 253 ~a~~~~~vmHplP~~rg~EI~~ 274 (306)
.+|+++++.-.. ||.=|+.
T Consensus 233 ~mK~ga~lIN~a---RG~iVDe 251 (416)
T 3k5p_A 233 KMKKGAFLINNA---RGSDVDL 251 (416)
T ss_dssp HSCTTEEEEECS---CTTSBCH
T ss_pred CCCCCCEEEECC---CCCCCCH
T ss_conf 089998688526---6540189
No 51
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase protein; structural genomics, PSI-2, protein structure initiative; 1.90A {Ralstonia solanacearum}
Probab=92.79 E-value=0.17 Score=28.65 Aligned_cols=131 Identities=17% Similarity=0.149 Sum_probs=73.2
Q ss_pred HHHHCCCCCCEECCCCCCCHH-HHHHHHHHHHHHHC-----------------------------CCCCCCCEEEECCCC
Q ss_conf 776301244124043332024-67876557664200-----------------------------133677304610455
Q gi|255764473|r 114 LELTEYATVPVINALTDNTHP-CQIIADIMTFEEHR-----------------------------GSVKGKLFSWSGDGN 163 (306)
Q Consensus 114 ~~~~~~~~vpvINa~~~~~HP-tQaL~D~~Ti~e~~-----------------------------g~l~~~~i~~vGd~~ 163 (306)
.+.++...+.|.|+.+...-. -.+++=++++.+.. ..+.|+++.++|- +
T Consensus 91 l~~~~~~gI~v~n~~g~~~avAE~~~~lil~l~r~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~L~gk~vgIiG~-G 169 (352)
T 3gg9_A 91 LEACTDKGVVVLEGKGSPVAPAELTWALVMAAQRRIPQYVASLKHGAWQQSGLKSTTMPPNFGIGRVLKGQTLGIFGY-G 169 (352)
T ss_dssp HHHHHHHTCEEECCCCCSHHHHHHHHHHHHHHHTTHHHHHHHHHTTCTTCCCCCCTTSCTTTTSBCCCTTCEEEEECC-S
T ss_pred HHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCEEEEEEE-C
T ss_conf 999986999998789987506899999999986557787777423752224543333575555564235989999966-6
Q ss_pred CCCCCHHHCCCCCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCHHHHHHCCCC
Q ss_conf 55431010012331257652000013210000243201332221366466306873322210000002201333100111
Q gi|255764473|r 164 NILHSLIEGAARFNYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFKAREEHVFQP 243 (306)
Q Consensus 164 ~v~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~~~~~~~~~~ 243 (306)
++.....+.+.-||+++....|....+.. .. ..+....++++.++.+|+|..-. ....+ ..
T Consensus 170 ~IG~~va~~l~~fg~~v~~~d~~~~~~~~------~~--~~~~~~~~l~~ll~~sDiv~~~~--Plt~~---------T~ 230 (352)
T 3gg9_A 170 KIGQLVAGYGRAFGMNVLVWGRENSKERA------RA--DGFAVAESKDALFEQSDVLSVHL--RLNDE---------TR 230 (352)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSHHHHHHH------HH--TTCEECSSHHHHHHHCSEEEECC--CCSTT---------TT
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCHHHHH------HH--HCCCCCCCHHHCCCCCCEECCCC--CCCHH---------HH
T ss_conf 89999999975279777631688315555------43--01210134111234454111346--78766---------63
Q ss_pred CCCCHHHHHCCCCCCEEECCC
Q ss_conf 233688996289872992599
Q gi|255764473|r 244 FQVNLSLMSMAHPDALFMHCL 264 (306)
Q Consensus 244 y~i~~~~l~~a~~~~~vmHpl 264 (306)
-.+|.+.++.+|+++++--..
T Consensus 231 ~li~~~~~~~mk~ga~lIN~s 251 (352)
T 3gg9_A 231 SIITVADLTRMKPTALFVNTS 251 (352)
T ss_dssp TCBCHHHHTTSCTTCEEEECS
T ss_pred HHHHHHHHHHCCCCEEEEEEC
T ss_conf 576799986318851799714
No 52
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, structural genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 1li4_A* 1a7a_A*
Probab=92.54 E-value=0.56 Score=25.24 Aligned_cols=245 Identities=16% Similarity=0.121 Sum_probs=133.5
Q ss_pred CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE-ECCCCCHHHHHHHHHHHHCCCCCCCCCC--
Q ss_conf 9888771784458999999999999999966523666544379879999-4288835789999898634754333321--
Q gi|255764473|r 2 MTYPKHFADLSNISSSNLSCIIEVAKKIKNSSENIFENKPLSGKVLAMI-FEKPSTRTRVSFEVAMKHLGGDTIFLSG-- 78 (306)
Q Consensus 2 m~~~k~~l~~~dl~~~~i~~ll~~A~~~k~~~~~~~~~~~l~gk~i~~l-F~e~StRTR~SFe~A~~~LG~~~~~~~~-- 78 (306)
|..-|++ ++.++.+.+|+..-..---+....++....+||+|.+|+.- -.++ .-.-.-..-+.+|+.|..-..
T Consensus 2 ~y~vkd~-~la~~G~~~i~wa~~~MP~L~~lr~~~~~~kPl~G~rI~~clHlt~---kTA~L~~tL~~~GA~V~~~~~Np 77 (436)
T 3h9u_A 2 MYKVRDI-SLAEWGRRELELAENEMPGLMELRREYGPSKPLKGAKIAGCLHMTM---QTAVLIETLVELGAEVRWASCNI 77 (436)
T ss_dssp -CEESCG-GGHHHHHHHHHHHHHHCHHHHHHHHHHTTTCTTTTCEEEEESCCSH---HHHHHHHHHHHTTCEEEEECSST
T ss_pred CCCCCCC-HHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCEEEEEECCHH---HHHHHHHHHHHCCCEEEEECCCC
T ss_conf 7403671-5657778999999977989999999963569989988999970249---99999999998698899955897
Q ss_pred CC---------------CCCCCCCCHHHHHHHHHH---------CCCEEEEEEC---------------------CC---
Q ss_conf 00---------------001232107999997530---------0101112101---------------------32---
Q gi|255764473|r 79 SE---------------MQLGRAETIGDTAKVLSR---------YVDAIVMRTT---------------------NH--- 110 (306)
Q Consensus 79 ~~---------------ss~~kgEsl~Dt~~~ls~---------~~D~iviR~~---------------------~~--- 110 (306)
-+ .--.+|||.++....+.. ..|+++=-.. ++
T Consensus 78 ~STqDdvaAaL~~~Gi~VfA~~g~~~eey~~~~~~~L~~~~~~~~P~liiDDGgDl~~~~~~~~~~l~~~iiG~~EETTT 157 (436)
T 3h9u_A 78 FSTQDHAAAAIAKRGIPVFAWKGETEEEYMWCMKQTLKGFSGDGYPNMLLDDGGDLTNYVLDECKELDGKIYGVSEETTT 157 (436)
T ss_dssp TTCCHHHHHHHHHTTCCEEECTTCCHHHHHHHHHHTTSCBTTTBCCSEEEESSSHHHHHHHHHC-CCTTTCCCEEECSHH
T ss_pred CCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHEECCCCCCCCCCEEEEEECCCH
T ss_conf 53238999999976977998469998999999997631327888725898310002200013344210012421221561
Q ss_pred --CHHHHHHC--CCCCCEECCCCC-------CCHHH-HHHHHHHHHHHHCC-CCCCCCEEEECCCCCCCCCHHHCCCCCC
Q ss_conf --00677630--124412404333-------20246-78765576642001-3367730461045555431010012331
Q gi|255764473|r 111 --SRLLELTE--YATVPVINALTD-------NTHPC-QIIADIMTFEEHRG-SVKGKLFSWSGDGNNILHSLIEGAARFN 177 (306)
Q Consensus 111 --~~~~~~~~--~~~vpvINa~~~-------~~HPt-QaL~D~~Ti~e~~g-~l~~~~i~~vGd~~~v~hS~i~~~~~~g 177 (306)
..++.+.+ ...+||||--+. +-|=| |...|- |.+.-+ -+.|++++.+|-+ .+.......+.-+|
T Consensus 158 Gv~RL~~m~~~g~L~~Pvi~VNDs~tK~~fDN~yGtgqS~~d~--i~r~Tn~~laGk~vvV~GYG-~vGrGvA~~~rg~G 234 (436)
T 3h9u_A 158 GVKNLYKRLQRGKLTIPAMNVNDSVTKSKFDNLYGCRESLVDG--IKRATDVMIAGKTACVCGYG-DVGKGCAAALRGFG 234 (436)
T ss_dssp HHHHHHHHHHHTCCCSCEEECTTSHHHHTTHHHHHHHHHHHHH--HHHHHCCCCTTCEEEEECCS-HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHCCCCCCCEEEECCCCCCCHHCCEEEECHHHHHH--HHHHCCCCCCCCEEEEECCC-CCCHHHHHHHCCCC
T ss_conf 8999988886178788669845732031212305642229999--99860877578679995555-20323788853599
Q ss_pred EEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCHHHHHHCCCCCCCCHHHHHCCCCC
Q ss_conf 25765200001321000024320133222136646630687332221000000220133310011123368899628987
Q gi|255764473|r 178 YLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFKAREEHVFQPFQVNLSLMSMAHPD 257 (306)
Q Consensus 178 ~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~~~~~~~~~~y~i~~~~l~~a~~~ 257 (306)
..|.++-... -..-.+.-.|..+ ...+++++.+|+++|-. +.. =-++.+-++..|.+
T Consensus 235 a~V~V~EvDP-----i~aleA~mdGf~V---~~~~~a~~~~DifvTaT----Gn~-----------~vi~~eh~~~mKdg 291 (436)
T 3h9u_A 235 ARVVVTEVDP-----INALQAAMEGYQV---LLVEDVVEEAHIFVTTT----GND-----------DIITSEHFPRMRDD 291 (436)
T ss_dssp CEEEEECSCH-----HHHHHHHHTTCEE---CCHHHHTTTCSEEEECS----SCS-----------CSBCTTTGGGCCTT
T ss_pred CEEEEEECCH-----HHHHHHHHCCCEE---CCHHHHHHHCCEEEEEC----CCC-----------CCCCHHHHHHHHCC
T ss_conf 8899993681-----8889998638850---22999883489999946----998-----------75889999987579
Q ss_pred CEEECCCCCCCCCCCCHHHHC
Q ss_conf 299259998748735767967
Q gi|255764473|r 258 ALFMHCLPAHRGEEVINEVLD 278 (306)
Q Consensus 258 ~~vmHplP~~rg~EI~~~v~d 278 (306)
+++.--|- .+.||+-+.+.
T Consensus 292 aIl~N~Gh--fd~EId~~~L~ 310 (436)
T 3h9u_A 292 AIVCNIGH--FDTEIQVAWLK 310 (436)
T ss_dssp EEEEECSS--SGGGBCHHHHH
T ss_pred CEEEECCC--CCCCCCHHHHH
T ss_conf 68993167--74001088786
No 53
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding domain, 37 amino acid insertional region; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis H37RV} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=92.44 E-value=0.58 Score=25.16 Aligned_cols=240 Identities=15% Similarity=0.097 Sum_probs=135.5
Q ss_pred CCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE-ECCCCCHHHHHHHHHHHHCCCCCCCCCC---------
Q ss_conf 784458999999999999999966523666544379879999-4288835789999898634754333321---------
Q gi|255764473|r 9 ADLSNISSSNLSCIIEVAKKIKNSSENIFENKPLSGKVLAMI-FEKPSTRTRVSFEVAMKHLGGDTIFLSG--------- 78 (306)
Q Consensus 9 l~~~dl~~~~i~~ll~~A~~~k~~~~~~~~~~~l~gk~i~~l-F~e~StRTR~SFe~A~~~LG~~~~~~~~--------- 78 (306)
+++.++.+.+|+.-=..---+....++....+||+|..|+.- -.++= |- -+-..-+.+|+.|..-+.
T Consensus 25 i~LA~~G~~~IewA~~~MPvL~~ire~~~~~kPl~G~rI~~~LHmt~k--TA-vLietL~a~GAeV~~~scNp~STQDdv 101 (494)
T 3ce6_A 25 LSLADFGRKELRIAEHEMPGLMSLRREYAEVQPLKGARISGSLHMTVQ--TA-VLIETLTALGAEVRWASCNIFSTQDHA 101 (494)
T ss_dssp GGGHHHHHHHHHHHHHHCHHHHHHHHHHTTTCTTTTCEEEEESCCSHH--HH-HHHHHHHHTTCEEEEECSSTTCCCHHH
T ss_pred HHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCEEEEEEECHHH--HH-HHHHHHHHCCCEEEEEECCCCCCCHHH
T ss_conf 036577689999999769899999998644699999989999820799--99-999999986987999717976545599
Q ss_pred -----------------CCCCCCCCCCHHHHHHHHHHC---------CCEEEEEECC-----------------------
Q ss_conf -----------------000012321079999975300---------1011121013-----------------------
Q gi|255764473|r 79 -----------------SEMQLGRAETIGDTAKVLSRY---------VDAIVMRTTN----------------------- 109 (306)
Q Consensus 79 -----------------~~ss~~kgEsl~Dt~~~ls~~---------~D~iviR~~~----------------------- 109 (306)
-..--.||||.++....+..- .|+|+=...+
T Consensus 102 AAALv~~~~~~~~~~~Gi~VfA~kGet~eeY~~~~~~~L~~~~~d~~p~iivDDGgDlt~~ih~~~~~~~~~~~~~~~~~ 181 (494)
T 3ce6_A 102 AAAVVVGPHGTPDEPKGVPVFAWKGETLEEYWWAAEQMLTWPDPDKPANMILDDGGDATMLVLRGMQYEKAGVVPPAEED 181 (494)
T ss_dssp HHHHHHCSSCCSSSCCSCCEECCTTCCHHHHHHHHHHHHCCSSTTSCCCEEEESSSHHHHHHHHHHHHHHHTSCCCCCTT
T ss_pred HHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHCHHHHHCCCCCCCCCC
T ss_conf 99986403566555588479997699989999999999717678999758964885255898734255535778887778
Q ss_pred ----------------------------------C------CHHHHHHC--CCCCCEECCCCC-------CCHHH-HHHH
Q ss_conf ----------------------------------2------00677630--124412404333-------20246-7876
Q gi|255764473|r 110 ----------------------------------H------SRLLELTE--YATVPVINALTD-------NTHPC-QIIA 139 (306)
Q Consensus 110 ----------------------------------~------~~~~~~~~--~~~vpvINa~~~-------~~HPt-QaL~ 139 (306)
+ ..++.+.+ ...+|+||--|. +-|=| |.+.
T Consensus 182 ~~~~~~~~~~~l~~~~~~~~~~~~~l~~~i~G~sEETTTGV~RL~~m~~~g~L~fPvi~VNDs~tK~~FDN~YGtgqS~~ 261 (494)
T 3ce6_A 182 DPAEWKVFLNLLRTRFETDKDKWTKIAESVKGVTEETTTGVLRLYQFAAAGDLAFPAINVNDSVTKSKFDNKYGTRHSLI 261 (494)
T ss_dssp SCHHHHHHHHHHHHHHHHCSSHHHHHHHHCCCEEECSHHHHHHHHHHHHTTCCCSCEEECTTSHHHHTTHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEEEEEEEHHHHHHHHHHHCCCCCCCEEEECCHHHHHHCCCCCCCCHHHH
T ss_conf 60789999999998765175044444431023324440799999999975998775687554466543133002532099
Q ss_pred HHHHHHHHCC-CCCCCCEEEECCCCCCCCCHHHCCCCCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCC
Q ss_conf 5576642001-336773046104555543101001233125765200001321000024320133222136646630687
Q gi|255764473|r 140 DIMTFEEHRG-SVKGKLFSWSGDGNNILHSLIEGAARFNYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGA 218 (306)
Q Consensus 140 D~~Ti~e~~g-~l~~~~i~~vGd~~~v~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~a 218 (306)
|-+ .+.-+ -+.|++++.+|-+ -+.......+.-+|..|.++-.... ..-.+.-.| +.+ ..+.++++.+
T Consensus 262 dgi--~r~Tn~~laGk~vvV~GYG-~vGkGvA~~~rg~Ga~V~V~EvDPi-----~ALeA~mdG--f~V-~~~~ea~~~~ 330 (494)
T 3ce6_A 262 DGI--NRGTDALIGGKKVLICGYG-DVGKGCAEAMKGQGARVSVTEIDPI-----NALQAMMEG--FDV-VTVEEAIGDA 330 (494)
T ss_dssp HHH--HHHHCCCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHH-----HHHHHHHTT--CEE-CCHHHHGGGC
T ss_pred HHH--HHHHHHHHCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCH-----HHHHHHHCC--CCC-CCHHHHHCCC
T ss_conf 999--9976676167269996543-0405899998528998999835818-----877877538--841-3399986009
Q ss_pred CCCCCCCEEECCCCCHHHHHHCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCHHHHCC
Q ss_conf 3322210000002201333100111233688996289872992599987487357679679
Q gi|255764473|r 219 HCVFTDTWISMNQEFKAREEHVFQPFQVNLSLMSMAHPDALFMHCLPAHRGEEVINEVLDG 279 (306)
Q Consensus 219 D~V~~~~~~~~~~~~~~~~~~~~~~y~i~~~~l~~a~~~~~vmHplP~~rg~EI~~~v~d~ 279 (306)
|+++|-. .. .=-++.+-++.+|+++++.--+- .+.||+-+.+..
T Consensus 331 DifVTaT-------G~--------~~vi~~eh~~~MKdgaIlaN~GH--fd~EId~~~L~~ 374 (494)
T 3ce6_A 331 DIVVTAT-------GN--------KDIIMLEHIKAMKDHAILGNIGH--FDNEIDMAGLER 374 (494)
T ss_dssp SEEEECS-------SS--------SCSBCHHHHHHSCTTCEEEECSS--SGGGBCHHHHHH
T ss_pred CEEEEEC-------CC--------CCCCCHHHHHHHCCCCEEECCCC--CCCEEEHHHHHC
T ss_conf 9999916-------99--------88767999983237978963466--641233888854
No 54
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=92.41 E-value=0.044 Score=32.50 Aligned_cols=55 Identities=11% Similarity=0.118 Sum_probs=24.1
Q ss_pred HHHHHHHHHHC-CCEEEEEEC-CCCHH-HHHHC-CCCCCEECCCCCCCHHHHHHHHHHH
Q ss_conf 79999975300-101112101-32006-77630-1244124043332024678765576
Q gi|255764473|r 89 IGDTAKVLSRY-VDAIVMRTT-NHSRL-LELTE-YATVPVINALTDNTHPCQIIADIMT 143 (306)
Q Consensus 89 l~Dt~~~ls~~-~D~iviR~~-~~~~~-~~~~~-~~~vpvINa~~~~~HPtQaL~D~~T 143 (306)
+.|.++-+..+ .|++++=-. +-+.+ +.+.+ +..+.+|..+++-.+-.+.|+.++-
T Consensus 151 ~leIa~~I~e~~PdAwllNyTNP~~ivt~al~r~~p~~kvvGlCh~~~~~~~~la~~Lg 209 (472)
T 1u8x_X 151 VLEILDYMEKYSPDAWMLNYSNPAAIVAEATRRLRPNSKILNICDMPVGIEDRMAQILG 209 (472)
T ss_dssp HHHHHHHHHHHCTTCEEEECCSCHHHHHHHHHHHSTTCCEEECCSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCC
T ss_conf 99999999966998499981786899999999858998889879867999999999839
No 55
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=91.71 E-value=0.7 Score=24.62 Aligned_cols=241 Identities=15% Similarity=0.109 Sum_probs=134.6
Q ss_pred CHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE-ECCCCCHHHHHHHHHHHHCCCCCCCCCC--CC------
Q ss_conf 84458999999999999999966523666544379879999-4288835789999898634754333321--00------
Q gi|255764473|r 10 DLSNISSSNLSCIIEVAKKIKNSSENIFENKPLSGKVLAMI-FEKPSTRTRVSFEVAMKHLGGDTIFLSG--SE------ 80 (306)
Q Consensus 10 ~~~dl~~~~i~~ll~~A~~~k~~~~~~~~~~~l~gk~i~~l-F~e~StRTR~SFe~A~~~LG~~~~~~~~--~~------ 80 (306)
++.+..+.+|+..-..---+....++....+||+|.+|+.- -.++-| .-.-..-+.+|+.|..-+. -+
T Consensus 20 sLa~~G~~~i~wa~~~MPvL~~ir~~~~~~kPl~G~rI~~~lHlt~kT---a~L~~tL~a~GAeV~~~~~Np~STQDdva 96 (435)
T 3gvp_A 20 KQAEFGRREIEIAEQEMPALMALRKRAQGEKPLAGAKIVGCTHITAQT---AVLMETLGALGAQCRWAACNIYSTLNEVA 96 (435)
T ss_dssp GGHHHHHHHHHHHHHTCHHHHHHHHHHSTTCTTTTCEEEEEECCSHHH---HHHHHHHHHTTCEEEEEESSSSCCCHHHH
T ss_pred HHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCEEEEEEECHHHH---HHHHHHHHHCCCEEEEECCCCCCCCHHHH
T ss_conf 352665798999997698999999986425998898899997021899---99999999769879994379766657999
Q ss_pred ---------CCCCCCCCHHHHHHHHHHC-------CCEEEEEEC---------------------CC-----CHHHHHHC
Q ss_conf ---------0012321079999975300-------101112101---------------------32-----00677630
Q gi|255764473|r 81 ---------MQLGRAETIGDTAKVLSRY-------VDAIVMRTT---------------------NH-----SRLLELTE 118 (306)
Q Consensus 81 ---------ss~~kgEsl~Dt~~~ls~~-------~D~iviR~~---------------------~~-----~~~~~~~~ 118 (306)
.--.+||+.++....+..- .|+++==.. ++ ..+..+.+
T Consensus 97 AaL~~~gi~VfA~~ge~~eey~~~l~~~L~~~~~~P~iiiDDG~Dl~~~~h~~~~~~~~~iiG~~EETTTGv~RL~~m~~ 176 (435)
T 3gvp_A 97 AALAESGFPVFAWKGESEDDFWWCIDRCVNVEGWQPNMILDDGGDLTHWIYKKYPNMFKKIKGIVEESVTGVHRLYQLSK 176 (435)
T ss_dssp HHHHHHTCCEECCTTCCHHHHHHHHHHHHCBTTBCCSEEEESSSHHHHHHHHHCHHHHHTCCEEEECCHHHHHHHTCC--
T ss_pred HHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf 99987696799867998789999998764158888518983443256664430636877642044556538999999986
Q ss_pred --CCCCCEECCCCC-------CCHHH-HHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHCCCCCCEEEEEECHHCC
Q ss_conf --124412404333-------20246-78765576642001336773046104555543101001233125765200001
Q gi|255764473|r 119 --YATVPVINALTD-------NTHPC-QIIADIMTFEEHRGSVKGKLFSWSGDGNNILHSLIEGAARFNYLLNIATPIGS 188 (306)
Q Consensus 119 --~~~vpvINa~~~-------~~HPt-QaL~D~~Ti~e~~g~l~~~~i~~vGd~~~v~hS~i~~~~~~g~~v~~~~P~~~ 188 (306)
...+|+||.-+. .-|=| |...|-+. +-.---+.|++++.+|-+ -+.+.....+.-+|..|.++-....
T Consensus 177 ~g~L~fPvi~VNDs~tK~~fDNryGtgqS~~dgi~-r~Tn~~laGk~vvV~GYG-~vGrGvA~~~rg~Ga~V~V~EiDPi 254 (435)
T 3gvp_A 177 AGKLCVPAMNVNDSVTKQKFDNLYCCRESILDGLK-RTTDMMFGGKQVVVCGYG-EVGKGCCAALKAMGSIVYVTEIDPI 254 (435)
T ss_dssp CCCCCSCEEECTTCHHHHHHHTHHHHHHHHHHHHH-HHHCCCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCCCCCCEEEECCHHHHHHHHHEEEEHHHHHHHHH-HHHCCCCCCCEEEEECCC-CCCHHHHHHHHCCCCEEEEEECCCH
T ss_conf 69866547995150340233120541053999999-972856068789996776-4343689985258983899968941
Q ss_pred CCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCHHHHHHCCCCCCCCHHHHHCCCCCCEEECCCCCCC
Q ss_conf 32100002432013322213664663068733222100000022013331001112336889962898729925999874
Q gi|255764473|r 189 EPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFKAREEHVFQPFQVNLSLMSMAHPDALFMHCLPAHR 268 (306)
Q Consensus 189 ~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~~~~~~~~~~y~i~~~~l~~a~~~~~vmHplP~~r 268 (306)
..-.+.-.|.. + .++.++++.+|+++|-. .. .=-++.+-++.+|+++++.--|- .
T Consensus 255 -----~aleA~mdGf~--V-~~~~ea~~~~DifvTaT-------Gn--------~~vI~~eh~~~mKdgaIlaNaGH--f 309 (435)
T 3gvp_A 255 -----CALQACMDGFR--L-VKLNEVIRQVDIVITCT-------GN--------KNVVTREHLDRMKNSCIVCNMGH--S 309 (435)
T ss_dssp -----HHHHHHHTTCE--E-CCHHHHTTTCSEEEECS-------SC--------SCSBCHHHHHHSCTTEEEEECSS--T
T ss_pred -----HHHHHHHCCCC--C-CCHHHHHHHCCEEEEEC-------CC--------CCCCCHHHHHHHCCCEEEECCCC--C
T ss_conf -----77899854865--3-53899763288999945-------98--------77277999998617909980476--7
Q ss_pred CCCCCHHHHCCC
Q ss_conf 873576796799
Q gi|255764473|r 269 GEEVINEVLDGP 280 (306)
Q Consensus 269 g~EI~~~v~d~~ 280 (306)
+.||+-+.+...
T Consensus 310 d~EId~~~L~~~ 321 (435)
T 3gvp_A 310 NTEIDVASLRTP 321 (435)
T ss_dssp TTTBTGGGGCST
T ss_pred CCCEEHHHHHCC
T ss_conf 721139998544
No 56
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=91.64 E-value=0.35 Score=26.58 Aligned_cols=85 Identities=20% Similarity=0.246 Sum_probs=55.4
Q ss_pred CCCCEEEEEECCCC----CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH-HHHHCCCEEEEEECCCCHHH--
Q ss_conf 37987999942888----357899998986347543333210000123210799999-75300101112101320067--
Q gi|255764473|r 42 LSGKVLAMIFEKPS----TRTRVSFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTAK-VLSRYVDAIVMRTTNHSRLL-- 114 (306)
Q Consensus 42 l~gk~i~~lF~e~S----tRTR~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~~-~ls~~~D~iviR~~~~~~~~-- 114 (306)
++||+|+.+-...+ .+..-.++.+++++|.+++.++.... .|.-.+.+. .++..+|+|++-..+.....
T Consensus 3 ~~gk~Ig~i~~~~~~~f~~~~~~g~~~~a~~~G~~~~~~~~~~d----~~~q~~~i~~~i~~~vDgiIi~~~~~~~~~~~ 78 (291)
T 3l49_A 3 LEGKTIGITAIGTDHDWDLKAYQAQIAEIERLGGTAIALDAGRN----DQTQVSQIQTLIAQKPDAIIEQLGNLDVLNPW 78 (291)
T ss_dssp CTTCEEEEEESCCSSHHHHHHHHHHHHHHHHTTCEEEEEECTTC----HHHHHHHHHHHHHHCCSEEEEESSCHHHHHHH
T ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCC----HHHHHHHHHHHHHCCCCEEEECCCCCHHHHHH
T ss_conf 88999999958999889999999999999974999999938999----99999999999974999999778640315899
Q ss_pred -HHHCCCCCCEECCCCC
Q ss_conf -7630124412404333
Q gi|255764473|r 115 -ELTEYATVPVINALTD 130 (306)
Q Consensus 115 -~~~~~~~vpvINa~~~ 130 (306)
+.++...+|||.-.+.
T Consensus 79 l~~~~~~~IPvv~~~~~ 95 (291)
T 3l49_A 79 LQKINDAGIPLFTVDTA 95 (291)
T ss_dssp HHHHHHTTCCEEEESCC
T ss_pred HHHHHHCCCCEEECCCC
T ss_conf 99999869937844654
No 57
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreductase, porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=91.40 E-value=0.077 Score=30.88 Aligned_cols=88 Identities=14% Similarity=0.108 Sum_probs=56.6
Q ss_pred CHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHCCCCCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCH
Q ss_conf 02467876557664200133677304610455554310100123312576520000132100002432013322213664
Q gi|255764473|r 132 THPCQIIADIMTFEEHRGSVKGKLFSWSGDGNNILHSLIEGAARFNYLLNIATPIGSEPRNEYLNWARNQGASVALFHDA 211 (306)
Q Consensus 132 ~HPtQaL~D~~Ti~e~~g~l~~~~i~~vGd~~~v~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~ 211 (306)
-|-+-.-.|-.-+.-.+=+++|++|.++|.++ |+-..+..+...|+++++++|.- .+++...++.....+....--
T Consensus 10 ~~~~~~~~~~~~~fPlfl~L~~k~VLVVGgG~-vA~rKi~~Ll~~ga~VtVisp~~---~~el~~l~~~~~i~~~~r~~~ 85 (223)
T 3dfz_A 10 HHHSSGHIEGRHMYTVMLDLKGRSVLVVGGGT-IATRRIKGFLQEGAAITVVAPTV---SAEINEWEAKGQLRVKRKKVG 85 (223)
T ss_dssp ------------CCEEEECCTTCCEEEECCSH-HHHHHHHHHGGGCCCEEEECSSC---CHHHHHHHHTTSCEEECSCCC
T ss_pred CCCCCCHHHCCCCCCEEEECCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEECCC---CHHHHHHHHCCCCEEEECCCC
T ss_conf 12333421059622608983998599989889-99999999974899799993889---989999997699699956888
Q ss_pred HHHCCCCCCCCC
Q ss_conf 663068733222
Q gi|255764473|r 212 VQAVKGAHCVFT 223 (306)
Q Consensus 212 ~eal~~aD~V~~ 223 (306)
.+.+.++++|+.
T Consensus 86 ~~dl~~~~lVia 97 (223)
T 3dfz_A 86 EEDLLNVFFIVV 97 (223)
T ss_dssp GGGSSSCSEEEE
T ss_pred HHHCCCCCEEEE
T ss_conf 667189649997
No 58
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, NAD dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=90.49 E-value=0.17 Score=28.64 Aligned_cols=23 Identities=9% Similarity=0.271 Sum_probs=15.0
Q ss_pred CCHHHCCHHHHHHHHHHHHHHHH
Q ss_conf 78445899999999999999996
Q gi|255764473|r 9 ADLSNISSSNLSCIIEVAKKIKN 31 (306)
Q Consensus 9 l~~~dl~~~~i~~ll~~A~~~k~ 31 (306)
|.+-|.+++-.....++++.+..
T Consensus 34 i~L~DId~~rl~~~~~l~~~~~~ 56 (417)
T 1up7_A 34 VIFYDIDEEKQKIVVDFVKRLVK 56 (417)
T ss_dssp EEEECSCHHHHHHHHHHHHHHHT
T ss_pred EEEECCCHHHHHHHHHHHHHHHC
T ss_conf 99985998999999999986640
No 59
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.95A {Pyrococcus horikoshii OT3}
Probab=90.39 E-value=0.57 Score=25.18 Aligned_cols=100 Identities=14% Similarity=0.051 Sum_probs=59.4
Q ss_pred HHHHCCCCCCEECCCCCCCHHH--HHHHHHHHHHHH-------------------------CCCCCCCCEEEECCCCCCC
Q ss_conf 7763012441240433320246--787655766420-------------------------0133677304610455554
Q gi|255764473|r 114 LELTEYATVPVINALTDNTHPC--QIIADIMTFEEH-------------------------RGSVKGKLFSWSGDGNNIL 166 (306)
Q Consensus 114 ~~~~~~~~vpvINa~~~~~HPt--QaL~D~~Ti~e~-------------------------~g~l~~~~i~~vGd~~~v~ 166 (306)
.+..+...++|.|+.+....+. .+++=++.+.+. ...+.|+++.++|- +++.
T Consensus 80 ~~~~~~~gI~v~n~~~~~~~~VAE~~l~~iL~l~R~l~~~~~~~~~g~~~~~~~~~~~~~~~~~l~g~~vgIiG~-G~IG 158 (333)
T 2d0i_A 80 LEEATKRGIYVTKVSGLLSEAVAEFTVGLIINLMRKIHYADKFIRRGEWESHAKIWTGFKRIESLYGKKVGILGM-GAIG 158 (333)
T ss_dssp HHHHHHTTCEEECCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCHHHHHTTSCCCCCSTTCEEEEECC-SHHH
T ss_pred HHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCEEEEEEC-CHHH
T ss_conf 999986799999789866478999999999999726357666653487321110013566543102877999910-7899
Q ss_pred CCHHHCCCCCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCC
Q ss_conf 310100123312576520000132100002432013322213664663068733222
Q gi|255764473|r 167 HSLIEGAARFNYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFT 223 (306)
Q Consensus 167 hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~ 223 (306)
......+..||+++....|..-.. .....+ ....++++.++.+|+|..
T Consensus 159 ~~va~~~~~fg~~v~~~~~~~~~~------~~~~~~---~~~~~l~ell~~sDiv~l 206 (333)
T 2d0i_A 159 KAIARRLIPFGVKLYYWSRHRKVN------VEKELK---ARYMDIDELLEKSDIVIL 206 (333)
T ss_dssp HHHHHHHGGGTCEEEEECSSCCHH------HHHHHT---EEECCHHHHHHHCSEEEE
T ss_pred HHHHHHHHCCCCEEEEECCCCCCC------HHHHCC---CCCCCHHHHCCCCCEEEE
T ss_conf 999998625686588505888710------344307---243798895264999998
No 60
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initiative; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=89.97 E-value=0.26 Score=27.43 Aligned_cols=56 Identities=16% Similarity=0.095 Sum_probs=29.0
Q ss_pred HHHHHHHHHHC-CCEEEEEECC--CCHHHHHHCCC-CCCEECCCCCCCHHHHHHHHHHHH
Q ss_conf 79999975300-1011121013--20067763012-441240433320246787655766
Q gi|255764473|r 89 IGDTAKVLSRY-VDAIVMRTTN--HSRLLELTEYA-TVPVINALTDNTHPCQIIADIMTF 144 (306)
Q Consensus 89 l~Dt~~~ls~~-~D~iviR~~~--~~~~~~~~~~~-~vpvINa~~~~~HPtQaL~D~~Ti 144 (306)
+.|.++-+..+ .|++++=-.+ +-..+.+.+.+ .+++|.-+++-.+....+++.+-+
T Consensus 132 ~~~i~~~i~~~~P~A~lln~TNP~~i~t~a~~r~~p~~kviGlC~~~~~~r~~lA~~Lgv 191 (450)
T 1s6y_A 132 ILDIIRDMEELCPDAWLINFTNPAGMVTEAVLRYTKQEKVVGLCNVPIGMRMGVAKLLGV 191 (450)
T ss_dssp HHHHHHHHHHHCTTCEEEECSSSHHHHHHHHHHHCCCCCEEECCSHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHCC
T ss_conf 999999875159984999978868999999998689987771177519999999999498
No 61
>2q5c_A NTRC family transcriptional regulator; structural genomics, PSI-2, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=88.75 E-value=0.73 Score=24.48 Aligned_cols=107 Identities=11% Similarity=0.058 Sum_probs=62.8
Q ss_pred HHHHHH---HHHHCCCEEEEEECCCCHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCC
Q ss_conf 799999---75300101112101320067763012441240433320246787655766420013367730461045555
Q gi|255764473|r 89 IGDTAK---VLSRYVDAIVMRTTNHSRLLELTEYATVPVINALTDNTHPCQIIADIMTFEEHRGSVKGKLFSWSGDGNNI 165 (306)
Q Consensus 89 l~Dt~~---~ls~~~D~iviR~~~~~~~~~~~~~~~vpvINa~~~~~HPtQaL~D~~Ti~e~~g~l~~~~i~~vGd~~~v 165 (306)
+++.++ -+...+|+|+-|+. +...+.++.++|||.-.-..+ =++..+..-+. .+.+++++|..+ +
T Consensus 38 l~~~~~iA~~l~~~~DVIISRGg---Ta~~Ir~~~~iPVVeI~vs~~----Dil~al~~a~~----~~~kiavvgf~~-~ 105 (196)
T 2q5c_A 38 LTRASKIAFGLQDEVDAIISRGA---TSDYIKKSVSIPSISIKVTRF----DTMRAVYNAKR----FGNELALIAYKH-S 105 (196)
T ss_dssp HHHHHHHHHHHTTTCSEEEEEHH---HHHHHHTTCSSCEEEECCCHH----HHHHHHHHHGG----GCSEEEEEEESS-C
T ss_pred HHHHHHHHHHHHCCCCEEEECCH---HHHHHHHHCCCCEEEECCCHH----HHHHHHHHHHH----HCCCEEEEECCC-C
T ss_conf 99999999975439879998965---899999828997799807887----99999999997----589789996785-0
Q ss_pred CCCHHHCCCCCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCC
Q ss_conf 431010012331257652000013210000243201332221
Q gi|255764473|r 166 LHSLIEGAARFNYLLNIATPIGSEPRNEYLNWARNQGASVAL 207 (306)
Q Consensus 166 ~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~ 207 (306)
....-.....|+.++.........-....+..++..|.++.+
T Consensus 106 ~~~~~~i~~ll~~~i~~~~~~~~~e~~~~i~~l~~~G~~vvV 147 (196)
T 2q5c_A 106 IVDKHEIEAMLGVKIKEFLFSSEDEITTLISKVKTENIKIVV 147 (196)
T ss_dssp SSCHHHHHHHHTCEEEEEEECSGGGHHHHHHHHHHTTCCEEE
T ss_pred CHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEE
T ss_conf 158999999859955999966889999999999986998999
No 62
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=88.18 E-value=0.18 Score=28.41 Aligned_cols=38 Identities=5% Similarity=0.030 Sum_probs=19.6
Q ss_pred CCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 4437987999942888357899998986347543333210
Q gi|255764473|r 40 KPLSGKVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSGS 79 (306)
Q Consensus 40 ~~l~gk~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~ 79 (306)
..+.+|+|+.+=. .-+-=.++-....+-|.+|..++..
T Consensus 7 ~~~~~k~i~iiG~--~G~mG~~~a~~l~~~g~~V~~~~~~ 44 (286)
T 3c24_A 7 NDVGPKTVAILGA--GGKMGARITRKIHDSAHHLAAIEIA 44 (286)
T ss_dssp CSCCCCEEEEETT--TSHHHHHHHHHHHHSSSEEEEECCS
T ss_pred CCCCCCEEEEECC--CCHHHHHHHHHHHHCCCEEEEEECC
T ss_conf 6668899999898--8789999999999786969999389
No 63
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=87.56 E-value=0.67 Score=24.75 Aligned_cols=61 Identities=13% Similarity=0.085 Sum_probs=41.0
Q ss_pred CCCCCCEEEECCCCCCCCCHHHCCCCCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCC
Q ss_conf 33677304610455554310100123312576520000132100002432013322213664663068733222
Q gi|255764473|r 150 SVKGKLFSWSGDGNNILHSLIEGAARFNYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFT 223 (306)
Q Consensus 150 ~l~~~~i~~vGd~~~v~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~ 223 (306)
.+.|+++.++|- +++.......+..||+++....|...... ......++.+.++.+|+|..
T Consensus 119 ~l~g~~vgIiG~-G~IG~~va~~l~~fg~~v~~~~~~~~~~~------------~~~~~~~~~~l~~~sDvv~~ 179 (290)
T 3gvx_A 119 LLYGKALGILGY-GGIGRRVAHLAKAFGMRVIAYTRSSVDQN------------VDVISESPADLFRQSDFVLI 179 (290)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSCCCTT------------CSEECSSHHHHHHHCSEEEE
T ss_pred EECCCEEEEECC-CCHHHHHHHHHCCCCCEEECCCCCCCCCC------------CCCCCCCHHHHHHHCCEEEE
T ss_conf 215889999898-71689999985268757860345442234------------32100106655401889766
No 64
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=87.56 E-value=0.64 Score=24.86 Aligned_cols=110 Identities=19% Similarity=0.185 Sum_probs=62.4
Q ss_pred CCHHHHHHHHHH-CCCEEEEEECCCCHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCC
Q ss_conf 107999997530-0101112101320067763012441240433320246787655766420013367730461045555
Q gi|255764473|r 87 ETIGDTAKVLSR-YVDAIVMRTTNHSRLLELTEYATVPVINALTDNTHPCQIIADIMTFEEHRGSVKGKLFSWSGDGNNI 165 (306)
Q Consensus 87 Esl~Dt~~~ls~-~~D~iviR~~~~~~~~~~~~~~~vpvINa~~~~~HPtQaL~D~~Ti~e~~g~l~~~~i~~vGd~~~v 165 (306)
|.+....+.+.. -+|+|+-|+. +...+.++.++|||.---..+ |++-....... .+.+|+++|..+ +
T Consensus 50 dav~~~~~~~~~~~~DviISRG~---ta~~Ir~~~~iPVVeI~vs~~-------Dil~aL~~a~~-~~~kIavVgf~~-~ 117 (225)
T 2pju_A 50 KAVTYIRKKLANERCDAIIAAGS---NGAYLKSRLSVPVILIKPSGY-------DVLQFLAKAGK-LTSSIGVVTYQE-T 117 (225)
T ss_dssp HHHHHHHHHTTTSCCSEEEEEHH---HHHHHHTTCSSCEEEECCCHH-------HHHHHHHHTTC-TTSCEEEEEESS-C
T ss_pred HHHHHHHHHHHCCCCCEEEECCH---HHHHHHHHCCCCEEEEECCHH-------HHHHHHHHHHH-HCCCEEEEECCC-C
T ss_conf 99999999986499869996856---899999858998899707876-------89999999997-589889993764-0
Q ss_pred CCCHHHCCCCCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCC
Q ss_conf 4310100123312576520000132100002432013322213
Q gi|255764473|r 166 LHSLIEGAARFNYLLNIATPIGSEPRNEYLNWARNQGASVALF 208 (306)
Q Consensus 166 ~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~ 208 (306)
....-.....||.++.........--...+..++..|.++.+-
T Consensus 118 ~~~~~~~~~ll~~~i~~~~~~~~~e~~~~v~~l~~~G~~vVVG 160 (225)
T 2pju_A 118 IPALVAFQKTFNLRLDQRSYITEEDARGQINELKANGTEAVVG 160 (225)
T ss_dssp CHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEE
T ss_pred CHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEC
T ss_conf 3699999999699449999668899999999999869979998
No 65
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=87.55 E-value=0.21 Score=28.06 Aligned_cols=71 Identities=14% Similarity=0.137 Sum_probs=49.6
Q ss_pred CCCCCCCEEEECCCCCCCCCHHHCCCCCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCC
Q ss_conf 1336773046104555543101001233125765200001321000024320133222136646630687332221
Q gi|255764473|r 149 GSVKGKLFSWSGDGNNILHSLIEGAARFNYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFTD 224 (306)
Q Consensus 149 g~l~~~~i~~vGd~~~v~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~~ 224 (306)
....+++++++|-+. +....+..+..-|.++.++.... +.....+++.|..+..+.++.+++.++|+|++-
T Consensus 17 ~~~~~kkilvIGaG~-~~~~~a~~L~~~~~~v~v~nRt~----~ka~~la~~~~~~~~~~~~l~~~l~~~DiVi~a 87 (144)
T 3oj0_A 17 RKNGGNKILLVGNGM-LASEIAPYFSYPQYKVTVAGRNI----DHVRAFAEKYEYEYVLINDIDSLIKNNDVIITA 87 (144)
T ss_dssp HHHCCCEEEEECCSH-HHHHHGGGCCTTTCEEEEEESCH----HHHHHHHHHHTCEEEECSCHHHHHHTCSEEEEC
T ss_pred HHCCCCEEEEECCHH-HHHHHHHHHHHCCCEEEEEECCH----HHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEE
T ss_conf 863999999999789-99999999985698468981999----999999875052202242089999767989992
No 66
>3e61_A Putative transcriptional repressor of ribose operon; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=84.47 E-value=2.1 Score=21.53 Aligned_cols=114 Identities=12% Similarity=0.049 Sum_probs=67.3
Q ss_pred CEEEEEECCCC----CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH-HHCCCEEEEEECCCCHHHHHHCC
Q ss_conf 87999942888----35789999898634754333321000012321079999975-30010111210132006776301
Q gi|255764473|r 45 KVLAMIFEKPS----TRTRVSFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTAKVL-SRYVDAIVMRTTNHSRLLELTEY 119 (306)
Q Consensus 45 k~i~~lF~e~S----tRTR~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~~~l-s~~~D~iviR~~~~~~~~~~~~~ 119 (306)
++|++++..-+ .+..-+++.++++.|.+++.++... .-|.-.+..+.+ +..+|++++-...........+.
T Consensus 9 ~~IGvi~p~~~~~~~~~l~~~i~~~a~~~g~~~~~~~~~~----~~~~e~~~~~~l~~~~vdgiii~~~~~~~~~~~l~~ 84 (277)
T 3e61_A 9 KLIGLLLPDMSNPFFTLIARGVEDVALAHGYQVLIGNSDN----DIKKAQGYLATFVSHNCTGMISTAFNENIIENTLTD 84 (277)
T ss_dssp -CEEEEESCTTSHHHHHHHHHHHHHHHHTTCCEEEEECTT----CHHHHHHHHHHHHHTTCSEEEECGGGHHHHHHHHHH
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCC----CHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH
T ss_conf 9899990999778999999999999998499999997899----989999999999865982999525310579999997
Q ss_pred CCCCEECCCCCCCHHHHHHHHHHHHH----HHCCCCCCCCEEEECCC
Q ss_conf 24412404333202467876557664----20013367730461045
Q gi|255764473|r 120 ATVPVINALTDNTHPCQIIADIMTFE----EHRGSVKGKLFSWSGDG 162 (306)
Q Consensus 120 ~~vpvINa~~~~~HPtQaL~D~~Ti~----e~~g~l~~~~i~~vGd~ 162 (306)
..+|++-......+.+-.-.|-+..- ++.-.....+++++++.
T Consensus 85 ~~ipvv~~~~~~~~~~~V~~d~~~~~~~a~~~l~~~~~~~i~~i~~~ 131 (277)
T 3e61_A 85 HHIPFVFIDRINNEHNGISTNHFKGGQLQAEVVRKGKGKNVLIVHEN 131 (277)
T ss_dssp C-CCEEEGGGCC---------HHHHHHHHHHHHHHTTCCSEEEEESC
T ss_pred CCCCEEEEEECCCCCCEEEECHHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 59988997304799997997689999999999984898369992476
No 67
>3dzb_A Prephenate dehydrogenase; domain SWAP, PSI2, NYSGXRC, tyrosine biosynthesis, EC:1.3.12.-, structural genomics; 2.46A {Streptococcus thermophilus lmg 18311}
Probab=83.89 E-value=0.25 Score=27.56 Aligned_cols=89 Identities=10% Similarity=0.079 Sum_probs=40.2
Q ss_pred CCCEEEEEECCCCHH---HHHHCC--CCCCEE-CCCCCCCHHHHHHHHHHHHHH--------HCC------------CCC
Q ss_conf 010111210132006---776301--244124-043332024678765576642--------001------------336
Q gi|255764473|r 99 YVDAIVMRTTNHSRL---LELTEY--ATVPVI-NALTDNTHPCQIIADIMTFEE--------HRG------------SVK 152 (306)
Q Consensus 99 ~~D~iviR~~~~~~~---~~~~~~--~~vpvI-Na~~~~~HPtQaL~D~~Ti~e--------~~g------------~l~ 152 (306)
.+|++++=+|..... .+++.+ ..-.|| -.++-...+++++--...=.. -+| -++
T Consensus 65 ~~DlVIla~P~~~~~~vl~~l~~~~~~~~~ivtDv~SvK~~~~~~~~~~~~~~~~~fV~~HPmaG~e~~G~~~a~~~lf~ 144 (317)
T 3dzb_A 65 LADVIILAVPIKQTMAYLKELADLDLKDNVIITDAGSTKREIVEAAERYLTGKNVQFVGSHPMAGSHKSGAIAADVTLFE 144 (317)
T ss_dssp GCSEEECCSCHHHHHHHHHHHTTSCCCTTCEEECCCSCCHHHHHHHHHHHTTSSCEECEEEECBCC------CCCTTTTT
T ss_pred CCCEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCCCCEECCCCCCCCCCCCHHHHHCCCCC
T ss_conf 58989991681266788999875550467599860565623899999865668851103665546455677676155445
Q ss_pred CCCEEEECCCCCCC--CC-HHHCCCCCCEEEEEECHHC
Q ss_conf 77304610455554--31-0100123312576520000
Q gi|255764473|r 153 GKLFSWSGDGNNIL--HS-LIEGAARFNYLLNIATPIG 187 (306)
Q Consensus 153 ~~~i~~vGd~~~v~--hS-~i~~~~~~g~~v~~~~P~~ 187 (306)
|..+.++++...-. .. .......+|..+....|..
T Consensus 145 ~~~~i~~p~~~~~~~~~~~v~~~~~~~G~~~~~~~~~e 182 (317)
T 3dzb_A 145 NAYYIFTPTSLTKETTIPELKDILSGLKSRYVEIDAAE 182 (317)
T ss_dssp TSEEEEECCTTCCTTHHHHHHHHGGGGCCEEEECCHHH
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECCCHH
T ss_conf 84377337863058899999999998099799748034
No 68
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=80.76 E-value=2.9 Score=20.62 Aligned_cols=209 Identities=12% Similarity=0.068 Sum_probs=108.6
Q ss_pred CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCCEEEEEECCCCCHHHHHH-HHHHHHCCCCCCCCCCC
Q ss_conf 9888771784458999999999999999966523666544-379879999428883578999-98986347543333210
Q gi|255764473|r 2 MTYPKHFADLSNISSSNLSCIIEVAKKIKNSSENIFENKP-LSGKVLAMIFEKPSTRTRVSF-EVAMKHLGGDTIFLSGS 79 (306)
Q Consensus 2 m~~~k~~l~~~dl~~~~i~~ll~~A~~~k~~~~~~~~~~~-l~gk~i~~lF~e~StRTR~SF-e~A~~~LG~~~~~~~~~ 79 (306)
|+.+--.|.=+.+.++--..+-+...+++.... +. .| | .+.++=..|+.++.... ..+|.++|.++- +..
T Consensus 1 ~~~~~~~l~gk~iA~~i~~~i~~~v~~l~~~~~-g~--~P~L---avIlvgdd~aS~~Yv~~K~k~a~~~Gi~~~-l~~- 72 (320)
T 1edz_A 1 MSKPGRTILASKVAETFNTEIINNVEEYKKTHN-GQ--GPLL---VGFLANNDPAAKMYATWTQKTSESMGFRYD-LRV- 72 (320)
T ss_dssp --CCCEECCHHHHHHHHHHHHHHHHHHHHHHTT-TC--CCEE---EEEECCCCHHHHHHHHHHHHHHHHHTCEEE-EEE-
T ss_pred CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCC-CC--CCEE---EEEECCCCHHHHHHHHHHHHHHHHCCCEEE-CCC-
T ss_conf 998760235799999999999999999998659-99--9748---999818987699999999999996889786-444-
Q ss_pred CCCCCCCCCHHHHHHHHHH--CCCEEEEEEC--CCCHHHHHHC----CCCC---CEECC------------CC--CCCHH
Q ss_conf 0001232107999997530--0101112101--3200677630----1244---12404------------33--32024
Q gi|255764473|r 80 EMQLGRAETIGDTAKVLSR--YVDAIVMRTT--NHSRLLELTE----YATV---PVINA------------LT--DNTHP 134 (306)
Q Consensus 80 ~ss~~kgEsl~Dt~~~ls~--~~D~iviR~~--~~~~~~~~~~----~~~v---pvINa------------~~--~~~HP 134 (306)
....+.+.+.+.-|+. -+|+|.+-.| .|-....+.. .-++ .-.|. .+ ...-|
T Consensus 73 ---~~~~~~l~~~I~~LN~D~~v~GIiVQlPLP~~ld~~~il~~I~p~KDVDGl~~~n~g~L~~~~~~~~~~~~~~~~~P 149 (320)
T 1edz_A 73 ---IEDKDFLEEAIIQANGDDSVNGIMVYFPVFGNAQDQYLQQVVCKEKDVEGLNHVYYQNLYHNVRYLDKENRLKSILP 149 (320)
T ss_dssp ---CSSGGGHHHHHHHHHHCTTCCEEEECSCSSSSHHHHHHTTTSCTTTBTTCCSHHHHHHHHTTCCBSSSSSCSBCCCC
T ss_pred ---CCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf ---68688999999997459976517984799963117889854897777486987788788428642232356677688
Q ss_pred HHHHHHHHHHHHHC----------CCCCCCCEEEECCCCCCCCCHHHCCCCCCEEEEEECHHCC---CCCCCCHHHHHCC
Q ss_conf 67876557664200----------1336773046104555543101001233125765200001---3210000243201
Q gi|255764473|r 135 CQIIADIMTFEEHR----------GSVKGKLFSWSGDGNNILHSLIEGAARFNYLLNIATPIGS---EPRNEYLNWARNQ 201 (306)
Q Consensus 135 tQaL~D~~Ti~e~~----------g~l~~~~i~~vGd~~~v~hS~i~~~~~~g~~v~~~~P~~~---~~~~~~~~~~~~~ 201 (306)
|-+++=+.-+ +++ ..++|++++++|..+-|..-+..++..-|+.++.|.-... ....... . ...
T Consensus 150 cTp~ai~~LL-~~y~i~~~~~~~g~~l~GK~vvVIGrS~iVGkPla~lL~~~~aTVt~~~~~~~~~~t~~~~~~-~-~~~ 226 (320)
T 1edz_A 150 CTPLAIVKIL-EFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLK-L-NKH 226 (320)
T ss_dssp HHHHHHHHHH-HHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSS-C-CCC
T ss_pred CCHHHHHHHH-HHHHHCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEE-E-EEC
T ss_conf 8889999999-984220245555666678769998256655489999997689879984246500026886258-8-621
Q ss_pred C-CCC-CCC-CCHHHHCCCCCCCCCC
Q ss_conf 3-322-213-6646630687332221
Q gi|255764473|r 202 G-ASV-ALF-HDAVQAVKGAHCVFTD 224 (306)
Q Consensus 202 g-~~i-~~~-~d~~eal~~aD~V~~~ 224 (306)
+ ..+ ..+ +.+.+...++|+|.+.
T Consensus 227 ~~~~~~~~~~d~l~~~~~~aDIvI~a 252 (320)
T 1edz_A 227 HVEDLGEYSEDLLKKCSLDSDVVITG 252 (320)
T ss_dssp EEEEEEECCHHHHHHHHHHCSEEEEC
T ss_pred CCCCCCCCCHHHHHHHHHCCCEEEEC
T ss_conf 33431211077888763046757852
No 69
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=79.43 E-value=1.3 Score=22.82 Aligned_cols=55 Identities=16% Similarity=0.274 Sum_probs=27.5
Q ss_pred HHHHHHHHHHC-CCEEEEEEC-CCCHH-HHHHC-CCCCCEECCCCCCCHHHHHHHHHHH
Q ss_conf 79999975300-101112101-32006-77630-1244124043332024678765576
Q gi|255764473|r 89 IGDTAKVLSRY-VDAIVMRTT-NHSRL-LELTE-YATVPVINALTDNTHPCQIIADIMT 143 (306)
Q Consensus 89 l~Dt~~~ls~~-~D~iviR~~-~~~~~-~~~~~-~~~vpvINa~~~~~HPtQaL~D~~T 143 (306)
+.|.++-+..+ .|++++=-. +-..+ +.+.+ +...+++.-+++...-+..++.++-
T Consensus 126 ~~~i~~~i~~~~p~a~iin~tNP~~i~t~~~~~~~~~~~~~glC~~~~~~~~~la~~l~ 184 (450)
T 3fef_A 126 FAEIARAIRDYAPESWVINYTNPMSVCTRVLYKVFPGIKAIGCCHEVFGTQKLLAEMVT 184 (450)
T ss_dssp HHHHHHHHHHHCTTSEEEECCSSHHHHHHHHHHHCTTCEEEECCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHH
T ss_conf 99999999831998089982483278884578658987459989983019999999999
No 70
>1vjt_A Alpha-glucosidase; TM0752, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics, hydrolase; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=78.57 E-value=0.74 Score=24.44 Aligned_cols=131 Identities=8% Similarity=0.002 Sum_probs=61.9
Q ss_pred CCHHHCCHHHHHHHHHHHHHHHHHHHCCCC-------CCCCCCCEEE-EEECCCCCHHHH--------HHHHHHHHCCCC
Q ss_conf 784458999999999999999966523666-------5443798799-994288835789--------999898634754
Q gi|255764473|r 9 ADLSNISSSNLSCIIEVAKKIKNSSENIFE-------NKPLSGKVLA-MIFEKPSTRTRV--------SFEVAMKHLGGD 72 (306)
Q Consensus 9 l~~~dl~~~~i~~ll~~A~~~k~~~~~~~~-------~~~l~gk~i~-~lF~e~StRTR~--------SFe~A~~~LG~~ 72 (306)
|.+-|.+.+-+..+-.+++.+.+....... ..-|+|-.-+ +-+.....|-+- -|++.- +-|..
T Consensus 46 l~L~Did~~rL~~~~~l~~~~~~~~~~~~~v~~Ttdr~eAl~gADfVi~~i~~~~~Rvg~~~~r~~ded~~Ip~-K~gl~ 124 (483)
T 1vjt_A 46 IYMMDVHERRLNASYILARKYVEELNSPVKIVKTSSLDEAIDGADFIINTAYPYDPRYHDSGSQRWDEVTKVGE-KHGYY 124 (483)
T ss_dssp EEEECSCHHHHHHHHHHHHHHHHHHTCCCEEEEESCHHHHHTTCSEEEECCCCCCTTTCSSHHHHHHHHHHHHH-HTTCT
T ss_pred EEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCEECCCH-HHCCC
T ss_conf 99968998999999999999999619890899978999997699999980310556546766433331232431-21500
Q ss_pred --CCCC-CCCCCCCCCC-C------CHHHHHHHHHHC-CCEEEEEE--CCCCHHHHHHCCCCCCEECCCCCCCHHHHHHH
Q ss_conf --3333-2100001232-1------079999975300-10111210--13200677630124412404333202467876
Q gi|255764473|r 73 --TIFL-SGSEMQLGRA-E------TIGDTAKVLSRY-VDAIVMRT--TNHSRLLELTEYATVPVINALTDNTHPCQIIA 139 (306)
Q Consensus 73 --~~~~-~~~~ss~~kg-E------sl~Dt~~~ls~~-~D~iviR~--~~~~~~~~~~~~~~vpvINa~~~~~HPtQaL~ 139 (306)
++-. ..+...+.+. = -+.|.++-+..+ .|+.++== |..-..+.+.+++.+.+|+..++-.. ++-++
T Consensus 125 ~gv~gQet~G~GG~~~alRtip~ipv~leia~di~e~~P~AwliNyTNP~~ivt~Av~~~~~~k~vGLC~~~~~-~~~~~ 203 (483)
T 1vjt_A 125 RGIDSQELNMVSTYTYVLSSYPDMKLALEIAEKMKKMAPKAYLMQTANPVFEITQAVRRWTGANIVGFCHGVAG-VYEVF 203 (483)
T ss_dssp TCTTCBTTBCCTTSCSTTTCHHHHHHHHHHHHHHHHHCTTCEEEECSSCHHHHHHHHHHHSCCCEEECCCGGGG-HHHHH
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCEEEECCCHHH-HHHHH
T ss_conf 25456526787655131025630299999999999769980899807888999999985269988996897277-99999
Q ss_pred HH
Q ss_conf 55
Q gi|255764473|r 140 DI 141 (306)
Q Consensus 140 D~ 141 (306)
..
T Consensus 204 ~~ 205 (483)
T 1vjt_A 204 EK 205 (483)
T ss_dssp HH
T ss_pred HH
T ss_conf 98
No 71
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydrolase, cytoplasm, NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei 1710B} PDB: 3glq_A*
Probab=78.23 E-value=3.4 Score=20.11 Aligned_cols=239 Identities=15% Similarity=0.111 Sum_probs=135.6
Q ss_pred CHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE-ECCCCCHHHHHHHHHHHHCCCCCCCCCCC---------
Q ss_conf 84458999999999999999966523666544379879999-42888357899998986347543333210---------
Q gi|255764473|r 10 DLSNISSSNLSCIIEVAKKIKNSSENIFENKPLSGKVLAMI-FEKPSTRTRVSFEVAMKHLGGDTIFLSGS--------- 79 (306)
Q Consensus 10 ~~~dl~~~~i~~ll~~A~~~k~~~~~~~~~~~l~gk~i~~l-F~e~StRTR~SFe~A~~~LG~~~~~~~~~--------- 79 (306)
++.++.+.+|+.--..---+....++....+||+|..|+.- -.++ -| .-+-..-+.+|+.|..-+..
T Consensus 41 sLA~~G~~~IewA~~~MPvL~~ir~~~~~ekPlkG~rI~~cLHlt~--kT-AvLi~TL~a~GAeV~~~scNp~STQDdvA 117 (494)
T 3d64_A 41 ALAGWGRKELNIAETEMPGLVQIRDEYKAQQPLKGARIAGSLHMTI--QT-GVLIETLKALGADVRWASCNIFSTQDHAA 117 (494)
T ss_dssp GGHHHHHHHHHHHGGGCHHHHHHHHHTTTTCTTTTCEEEEESCCSH--HH-HHHHHHHHHTTCEEEEECSSSSCCCHHHH
T ss_pred HHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCEEEEEEECHH--HH-HHHHHHHHHCCCEEEEECCCCCCCCHHHH
T ss_conf 3526657999999976989999999852569989998999970258--89-99999999859979995389775326999
Q ss_pred --------CCCCCCCCCHHHHHHH----HHHC----CCEEEEEECCC---------------------------------
Q ss_conf --------0001232107999997----5300----10111210132---------------------------------
Q gi|255764473|r 80 --------EMQLGRAETIGDTAKV----LSRY----VDAIVMRTTNH--------------------------------- 110 (306)
Q Consensus 80 --------~ss~~kgEsl~Dt~~~----ls~~----~D~iviR~~~~--------------------------------- 110 (306)
..--.||||.++.... |+.- .|+|+=...+-
T Consensus 118 AAL~~~Gi~VfA~kGet~eeY~~~~~~~L~~~~~~~P~lIiDDGgDl~~~~~~g~~~e~~~~~~~~~~~~e~~~~~~~~~ 197 (494)
T 3d64_A 118 AAIVEAGTPVFAFKGESLDEYWEFSHRIFEWPNGEFANMILDDGGDATLLLILGSKAEKDRSVIARPTNEEEVALFKSIE 197 (494)
T ss_dssp HHHHHTTCCEECCTTCCHHHHHHHHHHTTCCSTTCCCCEEEESSSHHHHHHHHHHHHHHCGGGGTCCCSHHHHHHHHHHH
T ss_pred HHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHCHHHHCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 99985798548977999899999999998338877845652055025678761504430556678999889999999988
Q ss_pred ----------------------------CHHHHHHC--CCCCCEECCCCC-------CCHHH-HHHHHHHHHHHHCC-CC
Q ss_conf ----------------------------00677630--124412404333-------20246-78765576642001-33
Q gi|255764473|r 111 ----------------------------SRLLELTE--YATVPVINALTD-------NTHPC-QIIADIMTFEEHRG-SV 151 (306)
Q Consensus 111 ----------------------------~~~~~~~~--~~~vpvINa~~~-------~~HPt-QaL~D~~Ti~e~~g-~l 151 (306)
..++.+.+ ...+|+||--|. +-|=| |.+.|-+- +.-+ -+
T Consensus 198 ~~~~~~p~~~~~~~~~i~G~sEETTTGV~RL~~m~~~g~L~fP~i~VNDs~tK~~FDNrYGtgqS~~dgi~--r~Tn~~l 275 (494)
T 3d64_A 198 RHLEIDGSWYSKRLAHIKGVTEETTTGVHRLYQMEKDGRLPFPAFNVNDSVTKSKFDNLYGCRESLVDGIK--RATDVMI 275 (494)
T ss_dssp HHHTTCTTTTHHHHTTCCCEEECSHHHHHHHHHHHHTTCCCSCEEECTTSHHHHHHHHHHHHHTTHHHHHH--HHHCCCC
T ss_pred HHHHCCCCHHHHHHHCEEEEEEEECHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHCCCCCCCHHHHHHHH--HHHCCEE
T ss_conf 76621851555444202003665113289899999759867535884655565563442111201999999--8616211
Q ss_pred CCCCEEEECCCCCCCCCHHHCCCCCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCC
Q ss_conf 67730461045555431010012331257652000013210000243201332221366466306873322210000002
Q gi|255764473|r 152 KGKLFSWSGDGNNILHSLIEGAARFNYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFTDTWISMNQ 231 (306)
Q Consensus 152 ~~~~i~~vGd~~~v~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~ 231 (306)
.|++++.+|-+- +.++....+.-+|..|.++-.... ..-.|.-.|..+ ..++++++.+|+++|-.
T Consensus 276 aGK~vvV~GYG~-~GrGvA~~~rg~Ga~V~V~EiDPi-----~ALeA~mdGf~V---~~~~eaa~~aDi~VTaT------ 340 (494)
T 3d64_A 276 AGKIAVVAGYGD-VGKGCAQSLRGLGATVWVTEIDPI-----CALQAAMEGYRV---VTMEYAADKADIFVTAT------ 340 (494)
T ss_dssp TTCEEEEECCSH-HHHHHHHHHHTTTCEEEEECSCHH-----HHHHHHTTTCEE---CCHHHHTTTCSEEEECS------
T ss_pred CCCEEEEECCCC-HHHHHHHHHHHCCCEEEEEECCCH-----HHHHHHHCCCEE---EHHHHHHCCCCEEEECC------
T ss_conf 685799952541-117689988636986999967906-----789988659874---22654221088999906------
Q ss_pred CCHHHHHHCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCHHHHCC
Q ss_conf 201333100111233688996289872992599987487357679679
Q gi|255764473|r 232 EFKAREEHVFQPFQVNLSLMSMAHPDALFMHCLPAHRGEEVINEVLDG 279 (306)
Q Consensus 232 ~~~~~~~~~~~~y~i~~~~l~~a~~~~~vmHplP~~rg~EI~~~v~d~ 279 (306)
.. .=-|+.+-++..|+++++.--|- ...||+-+....
T Consensus 341 -G~--------~~vi~~eh~~~MKdGaIlaN~GH--fd~EId~~~l~~ 377 (494)
T 3d64_A 341 -GN--------YHVINHDHMKAMRHNAIVCNIGH--FDSEIDVASTRQ 377 (494)
T ss_dssp -SS--------SCSBCHHHHHHCCTTEEEEECSS--SSCSBCCGGGTT
T ss_pred -CC--------CCCCCHHHHHHHCCCCEEECCCC--CHHHEEHHHHCC
T ss_conf -98--------66355999998538979966667--415301555516
No 72
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=77.33 E-value=0.76 Score=24.39 Aligned_cols=119 Identities=17% Similarity=0.163 Sum_probs=67.9
Q ss_pred HHHHHCCCCCCCCEEEECCCCCCCCCHHHCCCCCCE-EEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCC
Q ss_conf 664200133677304610455554310100123312-5765200001321000024320133222136646630687332
Q gi|255764473|r 143 TFEEHRGSVKGKLFSWSGDGNNILHSLIEGAARFNY-LLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCV 221 (306)
Q Consensus 143 Ti~e~~g~l~~~~i~~vGd~~~v~hS~i~~~~~~g~-~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V 221 (306)
-..+.+|+++++++.++|-+. +....+..+...|. .+.++... .......+...|....-+.++.+++..+|+|
T Consensus 157 ~~~~~~~~l~~~~vLviGaGe-m~~~~~~~L~~~g~~~i~v~nRt----~~rA~~la~~~~~~~~~~~~l~~~l~~~DiV 231 (404)
T 1gpj_A 157 LAERELGSLHDKTVLVVGAGE-MGKTVAKSLVDRGVRAVLVANRT----YERAVELARDLGGEAVRFDELVDHLARSDVV 231 (404)
T ss_dssp HHHHHHSCCTTCEEEEESCCH-HHHHHHHHHHHHCCSEEEEECSS----HHHHHHHHHHHTCEECCGGGHHHHHHTCSEE
T ss_pred HHHHHCCCCCCCEEEEECCCH-HHHHHHHHHHHCCCCCEEEECCC----HHHHHHHHHHCCCEEECHHHHHHHHCCCCEE
T ss_conf 999861573348189983848-89999999995688860786687----6678887650597574268777401238889
Q ss_pred CCCCEEECCCCCHHHHHHCCCCCCCCHHHHHC-------CCCCCEEECCCCCCCCCCCCHHHHCCCCCHH
Q ss_conf 22100000022013331001112336889962-------8987299259998748735767967997106
Q gi|255764473|r 222 FTDTWISMNQEFKAREEHVFQPFQVNLSLMSM-------AHPDALFMHCLPAHRGEEVINEVLDGPQSVV 284 (306)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~y~i~~~~l~~-------a~~~~~vmHplP~~rg~EI~~~v~d~~~s~~ 284 (306)
++-+ . -..|-++.+.++. .+|-.+|=-..| |++| ..|-+-|...+
T Consensus 232 IsaT--------~------s~~~ii~~~~~~~~~~~r~~~kpl~iIDLavP--RdId--p~v~~l~~V~l 283 (404)
T 1gpj_A 232 VSAT--------A------APHPVIHVDDVREALRKRDRRSPILIIDIANP--RDVE--EGVENIEDVEV 283 (404)
T ss_dssp EECC--------S------SSSCCBCHHHHHHHHHHCSSCCCEEEEECCSS--CSBC--TTGGGSTTEEE
T ss_pred EEEC--------C------CCCCEECHHHHHHHHHHCCCCCCEEEEEECCC--CCCC--HHHCCCCCEEE
T ss_conf 9941--------7------98733346566777640135898799960588--7766--43456688599
No 73
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=77.08 E-value=3.5 Score=20.06 Aligned_cols=76 Identities=14% Similarity=0.160 Sum_probs=37.9
Q ss_pred CCCCCCEEEECCCCCCCCCHHH-CCCCCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHH---HC--CCCCCCCC
Q ss_conf 3367730461045555431010-012331257652000013210000243201332221366466---30--68733222
Q gi|255764473|r 150 SVKGKLFSWSGDGNNILHSLIE-GAARFNYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQ---AV--KGAHCVFT 223 (306)
Q Consensus 150 ~l~~~~i~~vGd~~~v~hS~i~-~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~e---al--~~aD~V~~ 223 (306)
.+.|+++++.||...+. ++.. +..-+|+.+..++...-.............+..+.+..|..+ ++ ...|+++-
T Consensus 277 ~l~GKrv~V~gd~~~~~-~l~~fl~~ElG~~vv~~gt~~~~~~~~~r~~~~~~~~e~~~~~D~~eie~~i~~~~pdliiG 355 (525)
T 3aek_B 277 YLTGKRVFIFGDGTHVI-AAARIAAKEVGFEVVGMGCYNREMARPLRTAAAEYGLEALITDDYLEVEKAIEAAAPELILG 355 (525)
T ss_dssp GGTTCEEEECSSHHHHH-HHHHHHHHTTCCEEEEEEESCGGGHHHHHHHHHHTTCCCEECSCHHHHHHHHHHHCCSEEEE
T ss_pred HHCCCEEEEECCCHHHH-HHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCEEEE
T ss_conf 75498699977816799-99999999669879993478611579999765532974796599999999986469999997
Q ss_pred CCE
Q ss_conf 100
Q gi|255764473|r 224 DTW 226 (306)
Q Consensus 224 ~~~ 226 (306)
..+
T Consensus 356 ss~ 358 (525)
T 3aek_B 356 TQM 358 (525)
T ss_dssp CHH
T ss_pred CCH
T ss_conf 817
No 74
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99.5) (CM) and prephenate dehydrogenase...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=76.65 E-value=1.4 Score=22.69 Aligned_cols=86 Identities=8% Similarity=0.150 Sum_probs=49.4
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHH---HCCC-
Q ss_conf 879999428883578999989863475433332100001232107999997530010111210132006776---3012-
Q gi|255764473|r 45 KVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTAKVLSRYVDAIVMRTTNHSRLLEL---TEYA- 120 (306)
Q Consensus 45 k~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~~~ls~~~D~iviR~~~~~~~~~~---~~~~- 120 (306)
|.|+.+= -.-+==-||..+.++-|..|...+.... +..+ -+-..+|++++=.|.......+ ..+.
T Consensus 22 ~ki~iIG--G~G~mG~sla~~l~~~G~~V~~~d~~~~------~~~~---~~~~~aD~VilavP~~~~~~~l~~~~~~l~ 90 (298)
T 2pv7_A 22 HKIVIVG--GYGKLGGLFARYLRASGYPISILDREDW------AVAE---SILANADVVIVSVPINLTLETIERLKPYLT 90 (298)
T ss_dssp CCEEEET--TTSHHHHHHHHHHHTTTCCEEEECTTCG------GGHH---HHHTTCSEEEECSCGGGHHHHHHHHGGGCC
T ss_pred CEEEEEE--CCCHHHHHHHHHHHHCCCEEEEECCCCH------HHHH---HHHCCCCEEEEECCHHHHHHHHHHHHHHCC
T ss_conf 8389992--6986789999999968995999749804------3289---987599999990969999787898755248
Q ss_pred -CCCEECCCCCCCHHHHHHHHH
Q ss_conf -441240433320246787655
Q gi|255764473|r 121 -TVPVINALTDNTHPCQIIADI 141 (306)
Q Consensus 121 -~vpvINa~~~~~HPtQaL~D~ 141 (306)
+.-|+--++-...|.+++...
T Consensus 91 ~~~iv~Dv~SvK~~i~~~~~~~ 112 (298)
T 2pv7_A 91 ENMLLADLTSVKREPLAKMLEV 112 (298)
T ss_dssp TTSEEEECCSCCHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHH
T ss_conf 8856974044126899999874
No 75
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=76.52 E-value=1.3 Score=22.93 Aligned_cols=77 Identities=16% Similarity=0.114 Sum_probs=28.6
Q ss_pred CCEEEEEECCCCHHHHHHCCCCCCEECCCCC---CCHHHHHHHHHHHHHHHCCCCCCCCEEEE--CCCC--CCCCCHHHC
Q ss_conf 1011121013200677630124412404333---20246787655766420013367730461--0455--554310100
Q gi|255764473|r 100 VDAIVMRTTNHSRLLELTEYATVPVINALTD---NTHPCQIIADIMTFEEHRGSVKGKLFSWS--GDGN--NILHSLIEG 172 (306)
Q Consensus 100 ~D~iviR~~~~~~~~~~~~~~~vpvINa~~~---~~HPtQaL~D~~Ti~e~~g~l~~~~i~~v--Gd~~--~v~hS~i~~ 172 (306)
+|+++....-...+..+... ...++..+.. ...+.+...+.+ .+. --+|++|+++ ||+. ....-.+..
T Consensus 242 advv~~~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l--~~~--~~~G~~Va~l~~GDP~~ys~~~~~~~~ 316 (457)
T 1pjq_A 242 ADIVVYDRLVSDDIMNLVRR-DADRVFVGKRAGYHCVPQEEINQIL--LRE--AQKGKRVVRLKGGDPFIFGRGGEELET 316 (457)
T ss_dssp CSEEEECTTSCHHHHTTSCT-TSEEEECSCC---CCCTTHHHHHHH--HHH--HHTTCEEEEEESBCTTTSSSHHHHHTT
T ss_pred CCEEEECCCCCHHHHHHCCC-CCEEEECCCCCCCCCCHHHHHHHHH--HHH--HHCCCEEEEEECCCCCCCHHHHHHHHH
T ss_conf 99999868763778865234-5437730355554420078999999--999--974985999906886441669999998
Q ss_pred CCCCCEEEE
Q ss_conf 123312576
Q gi|255764473|r 173 AARFNYLLN 181 (306)
Q Consensus 173 ~~~~g~~v~ 181 (306)
+..-|..+.
T Consensus 317 ~~~~~i~ve 325 (457)
T 1pjq_A 317 LCHAGIPFS 325 (457)
T ss_dssp TTTTTCCEE
T ss_pred HHHCCEEEE
T ss_conf 763783699
No 76
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=76.23 E-value=3.9 Score=19.75 Aligned_cols=174 Identities=10% Similarity=0.056 Sum_probs=89.9
Q ss_pred EEEEEECCCC--CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH-HHCCCEEEEEECCCCHHHHHHC----
Q ss_conf 7999942888--35789999898634754333321000012321079999975-3001011121013200677630----
Q gi|255764473|r 46 VLAMIFEKPS--TRTRVSFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTAKVL-SRYVDAIVMRTTNHSRLLELTE---- 118 (306)
Q Consensus 46 ~i~~lF~e~S--tRTR~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~~~l-s~~~D~iviR~~~~~~~~~~~~---- 118 (306)
.+.-++=.|= .+.-.=+..+.+.+|.+..|.... +. .+.+.+....+ +..+.++-+=.|--..+..+..
T Consensus 24 k~ygviG~PI~hS~SP~ihn~~f~~~gl~~~Y~~~~---v~-~~~l~~~i~~l~~~~~~G~nVT~P~K~~~~~~~d~l~~ 99 (297)
T 2egg_A 24 KVYGLIGFPVEHSLSPLMHNDAFARLGIPARYHLFS---VE-PGQVGAAIAGVRALGIAGVNVTIPHKLAVIPFLDEVDE 99 (297)
T ss_dssp EEEEEEESSCTTCSHHHHHHHHHHHTTCCEEEEEEE---CC-TTCHHHHHHHHHHHTCCEEEECTTCTTTTGGGCSEECH
T ss_pred EEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEEE---CC-HHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHCCCCH
T ss_conf 589998787641315999999999869980899997---78-78899999988756987689653768789987154888
Q ss_pred ------CCCCCEECCCCCCCHHHHHHHHHHHHHHHCC-CCCCCCEEEECCCCCCCCCHHHCCCCCCEE-EEEECHHCCCC
Q ss_conf ------1244124043332024678765576642001-336773046104555543101001233125-76520000132
Q gi|255764473|r 119 ------YATVPVINALTDNTHPCQIIADIMTFEEHRG-SVKGKLFSWSGDGNNILHSLIEGAARFNYL-LNIATPIGSEP 190 (306)
Q Consensus 119 ------~~~vpvINa~~~~~HPtQaL~D~~Ti~e~~g-~l~~~~i~~vGd~~~v~hS~i~~~~~~g~~-v~~~~P~~~~~ 190 (306)
..+.-+.+.+.-..+-|-...=+.++.+..+ .++++++.++|-++ +++|.+.++...|.. +.++.... .-
T Consensus 100 ~A~~igAvNTi~~~~~~l~G~NTD~~G~~~~L~~~~~~~~~~k~vlIlGaGG-aarai~~aL~~~g~~~i~i~~R~~-~k 177 (297)
T 2egg_A 100 HARRIGAVNTIINNDGRLVGYNTDGLGYVQALEEEMNITLDGKRILVIGAGG-GARGIYFSLLSTAAERIDMANRTV-EK 177 (297)
T ss_dssp HHHHHTCCCEEEEETTEEEEECCHHHHHHHHHHHHTTCCCTTCEEEEECCSH-HHHHHHHHHHTTTCSEEEEECSSH-HH
T ss_pred HHHHHCCEEEEEEECCEEEEEECCHHHHHHHHHHHCCCCCCCCEEEEECCCH-HHHHHHHHHHHCCCCCCCHHCCCH-HH
T ss_conf 8886235458996499899994588899999998549986787699976627-689999999973985100002669-99
Q ss_pred CCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCC
Q ss_conf 10000243201332221366466306873322210
Q gi|255764473|r 191 RNEYLNWARNQGASVALFHDAVQAVKGAHCVFTDT 225 (306)
Q Consensus 191 ~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~~~ 225 (306)
...+...............+.+......|+|+-..
T Consensus 178 a~~l~~~~~~~~~~~~~~~~~~~~~~~~dlvInat 212 (297)
T 2egg_A 178 AERLVREGDERRSAYFSLAEAETRLAEYDIIINTT 212 (297)
T ss_dssp HHHHHHHSCSSSCCEECHHHHHHTGGGCSEEEECS
T ss_pred HHHHHHHHCCCCCCCHHHHHHHCCCCCCCEECCCC
T ss_conf 99999860114654012444421233015632557
No 77
>3exa_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacillus halodurans} PDB: 2qgn_A
Probab=76.16 E-value=3.5 Score=20.03 Aligned_cols=93 Identities=20% Similarity=0.257 Sum_probs=54.2
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCH-------HHHHHHHHHCCCEEEEEEC-C-----
Q ss_conf 79879999428883578999989863475433332100001232107-------9999975300101112101-3-----
Q gi|255764473|r 43 SGKVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSGSEMQLGRAETI-------GDTAKVLSRYVDAIVMRTT-N----- 109 (306)
Q Consensus 43 ~gk~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl-------~Dt~~~ls~~~D~iviR~~-~----- 109 (306)
+.|.|+.+=--.|--|++|+++ |++++|.+|+ ++++|+.||=.+ ++...+---++|.+-.-.. +
T Consensus 2 k~kii~I~GpTasGKS~la~~L-A~~~~~eIIs--aDS~QvYk~l~IgTaKps~~e~~~ipHhlid~~~p~e~~sv~~f~ 78 (322)
T 3exa_A 2 KEKLVAIVGPTAVGKTKTSVML-AKRLNGEVIS--GDSMQVYRGMDIGTAKITAEEMDGVPHHLIDIKDPSESFSVADFQ 78 (322)
T ss_dssp CCEEEEEECCTTSCHHHHHHHH-HHTTTEEEEE--CCGGGGBTTCCTTTTCCCHHHHTTCCEESSSCBCTTSCCCHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHH-HHHCCCEEEE--EEHHHHCCCCCEEECCCCHHHHHCCCEEEECCCCCCCCEEHHHHH
T ss_conf 9867999898721699999999-9987996996--212765499976778999999907997741573788742299878
Q ss_pred ---CCHHHHHHCCCCCCEECCCCCCCHHHHHHHH
Q ss_conf ---2006776301244124043332024678765
Q gi|255764473|r 110 ---HSRLLELTEYATVPVINALTDNTHPCQIIAD 140 (306)
Q Consensus 110 ---~~~~~~~~~~~~vpvINa~~~~~HPtQaL~D 140 (306)
...+.++.+...+|||=||||-+ -|+|++
T Consensus 79 ~~a~~~i~~i~~r~k~PIlVGGTglY--l~aLl~ 110 (322)
T 3exa_A 79 DLATPLITEIHERGRLPFLVGGTGLY--VNAVIH 110 (322)
T ss_dssp HHHHHHHHHHHHTTCEEEEESCCHHH--HHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEEECCHHH--HHHHHC
T ss_conf 78999999999769980999483889--999981
No 78
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransferase; purine biosynthesis, glycosyltransferase, glutamine amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A*
Probab=75.19 E-value=1.4 Score=22.65 Aligned_cols=133 Identities=15% Similarity=0.175 Sum_probs=77.8
Q ss_pred EEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH---------C--CC-EEEEEECCCCH--HH
Q ss_conf 99428883578999989863475433332100001232107999997530---------0--10-11121013200--67
Q gi|255764473|r 49 MIFEKPSTRTRVSFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTAKVLSR---------Y--VD-AIVMRTTNHSR--LL 114 (306)
Q Consensus 49 ~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~~~ls~---------~--~D-~iviR~~~~~~--~~ 114 (306)
..|.++.....++||- +||.-.+|.+ -|.++.+.=+-++. . .| -+|+=.|+.+. ..
T Consensus 241 ~~~~~~~~~~~C~FE~---------IYFaRpdS~~-~g~~Vy~~R~~lG~~La~~~~~~~~~~~~dvV~~vPds~~~aA~ 310 (504)
T 1ecf_A 241 RQCADNPVSNPCLFEY---------VYFARPDSFI-DKISVYSARVNMGTKLGEKIAREWEDLDIDVVIPIPETSCDIAL 310 (504)
T ss_dssp EECSSSCCCCCBHHHH---------HTTSCTTCEE-TTEEHHHHHHHHHHHHHHHHHHHTTTCCCCEEEECTTTTHHHHH
T ss_pred EECCCCCCCCCCEEEE---------EEECCCCCEE-CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHH
T ss_conf 9745788776545899---------9853786106-78358999999999999986654168777365368995489999
Q ss_pred HHHCCCCCCEECCCCC-C------CHHHHHHHHHHHHHH---HCCCCCCCCEEEECCC---CCCCCCHHHCCCCCCE---
Q ss_conf 7630124412404333-2------024678765576642---0013367730461045---5554310100123312---
Q gi|255764473|r 115 ELTEYATVPVINALTD-N------THPCQIIADIMTFEE---HRGSVKGKLFSWSGDG---NNILHSLIEGAARFNY--- 178 (306)
Q Consensus 115 ~~~~~~~vpvINa~~~-~------~HPtQaL~D~~Ti~e---~~g~l~~~~i~~vGd~---~~v~hS~i~~~~~~g~--- 178 (306)
.+++.+.+|.-.+.-. . --|+|.+=+...-.+ .+..++|++|.+|=|. +++....+..+.+.|+
T Consensus 311 g~a~~~gip~~~~likn~y~gRtFI~p~~~~R~~~v~~Kl~~~~~~i~gk~ivlvDDSIVRGtT~k~ii~~Lr~aGakeI 390 (504)
T 1ecf_A 311 EIARILGKPYRQGFVKNRYVGRTFIMPGQQLRRKSVRRKLNANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKV 390 (504)
T ss_dssp HHHHHHTCCBCCCEEECSCCCCCCCCSSSCCCCCCSTTTEEECGGGTTTCCEEEEESCCSSSHHHHHHHHHHHHTTCSSE
T ss_pred HHHHHCCCHHHHEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCHHHEECCCEEEEECCHHCCCHHHHHHHHHHHCCCCEE
T ss_conf 99998096354302454011553448757887652000223234213136279975301026419999999997699889
Q ss_pred EEEEECHHCCCCC
Q ss_conf 5765200001321
Q gi|255764473|r 179 LLNIATPIGSEPR 191 (306)
Q Consensus 179 ~v~~~~P~~~~~~ 191 (306)
.+.+++|+-..|.
T Consensus 391 hvri~sPpi~~pc 403 (504)
T 1ecf_A 391 YLASAAPEIRFPN 403 (504)
T ss_dssp EEEESSCCCCSCC
T ss_pred EEEECCCCCCCCC
T ss_conf 9997789857875
No 79
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus 230ORGANISM_TAXID}
Probab=74.25 E-value=4.3 Score=19.42 Aligned_cols=239 Identities=17% Similarity=0.130 Sum_probs=134.7
Q ss_pred CHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE-ECCCCCHHHHHHHHHHHHCCCCCCCCC--CCC------
Q ss_conf 84458999999999999999966523666544379879999-428883578999989863475433332--100------
Q gi|255764473|r 10 DLSNISSSNLSCIIEVAKKIKNSSENIFENKPLSGKVLAMI-FEKPSTRTRVSFEVAMKHLGGDTIFLS--GSE------ 80 (306)
Q Consensus 10 ~~~dl~~~~i~~ll~~A~~~k~~~~~~~~~~~l~gk~i~~l-F~e~StRTR~SFe~A~~~LG~~~~~~~--~~~------ 80 (306)
++.++.+.+|+..-..---+....++....+||+|.+|+.- -.++ -|-. +-..-+.+|+.|..-+ +-+
T Consensus 11 sLA~~G~~~I~wa~~~MP~L~~ir~~~~~~kPl~G~rI~~clHlt~--kTAv-LietL~a~GAeV~~~scNplSTQDdvA 87 (464)
T 3n58_A 11 SLADWGRKELDIAETEMPGLMAAREEFGKSQPLKGARISGSLHMTI--QTAV-LIETLKVLGAEVRWASCNIFSTQDHAA 87 (464)
T ss_dssp GGHHHHHHHHHHHHTTCHHHHHHHHHHTTTCTTTTCEEEEESCCSH--HHHH-HHHHHHHTTCEEEEECSSTTCCCHHHH
T ss_pred HHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCEEEEEEECHH--HHHH-HHHHHHHCCCEEEEECCCCCCCHHHHH
T ss_conf 4537767999999977989999999852469989998999982169--9999-999999769869996179865128899
Q ss_pred ---------CCCCCCCCHHHHHHHHHHC--------CCEEEEEEC-----------------------------------
Q ss_conf ---------0012321079999975300--------101112101-----------------------------------
Q gi|255764473|r 81 ---------MQLGRAETIGDTAKVLSRY--------VDAIVMRTT----------------------------------- 108 (306)
Q Consensus 81 ---------ss~~kgEsl~Dt~~~ls~~--------~D~iviR~~----------------------------------- 108 (306)
.--.||||.++....+..- .|+|+==..
T Consensus 88 AAL~~~Gi~VfAwkGet~eeY~~~~~~~L~~~d~~pp~lIiDDGgDlt~~~h~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 167 (464)
T 3n58_A 88 AAIAATGTPVFAVKGETLEEYWTYTDQIFQWPDGEPSNMILDDGGDATMYILIGARAEAGEDVLSNPQSEEEEVLFAQIK 167 (464)
T ss_dssp HHHHHTTCCEEECTTCCHHHHHHHHHHTTCCTTSCCCSEEEESSSHHHHHHHHHHHHHTTCCCSSSCCSHHHHHHHHHHH
T ss_pred HHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEEEECCCHHHCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 99986798379975999789999999997346899984687168760787632511221455668987327899999998
Q ss_pred --------------------CC------CHHHHHHC--CCCCCEECCCCC-------CCHHH-HHHHHHHHHHHHCC-CC
Q ss_conf --------------------32------00677630--124412404333-------20246-78765576642001-33
Q gi|255764473|r 109 --------------------NH------SRLLELTE--YATVPVINALTD-------NTHPC-QIIADIMTFEEHRG-SV 151 (306)
Q Consensus 109 --------------------~~------~~~~~~~~--~~~vpvINa~~~-------~~HPt-QaL~D~~Ti~e~~g-~l 151 (306)
.+ ..++.+.+ ....|+||--|. +-|=| |...|-+- +.-+ -+
T Consensus 168 ~~~~~~~~~~~~~~~~i~G~sEETTTGv~RL~~m~~~g~L~fPvi~VNDa~tK~~FDNrYGtgqS~~dgi~--r~Tn~l~ 245 (464)
T 3n58_A 168 KRMAATPGFFTKQRAAIKGVTEETTTGVNRLYQLQKKGLLPFPAINVNDSVTKSKFDNKYGCKESLVDGIR--RGTDVMM 245 (464)
T ss_dssp HHHHHSTTHHHHHHHHCCEEEECSHHHHHHHHHHHHHTCCCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH--HHHCCCC
T ss_pred HHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHCCCCCCCHHHHHHHH--HHHCCEE
T ss_conf 87752821776777765045456429999999998779877666882654664441232121133999999--8626055
Q ss_pred CCCCEEEECCCCCCCCCHHHCCCCCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCC
Q ss_conf 67730461045555431010012331257652000013210000243201332221366466306873322210000002
Q gi|255764473|r 152 KGKLFSWSGDGNNILHSLIEGAARFNYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFTDTWISMNQ 231 (306)
Q Consensus 152 ~~~~i~~vGd~~~v~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~ 231 (306)
.|++++.+|-+- +.......+.-+|..|.++-.... ..-.+.-.|..+ ..+.++++.+|+++|-.
T Consensus 246 aGK~vvV~GYG~-~GkG~A~~~rg~Ga~V~V~EvDPi-----~AleA~mdGf~V---~~~~~a~~~~DifvTaT------ 310 (464)
T 3n58_A 246 AGKVAVVCGYGD-VGKGSAQSLAGAGARVKVTEVDPI-----CALQAAMDGFEV---VTLDDAASTADIVVTTT------ 310 (464)
T ss_dssp TTCEEEEECCSH-HHHHHHHHHHHTTCEEEEECSSHH-----HHHHHHHTTCEE---CCHHHHGGGCSEEEECC------
T ss_pred CCCEEEEEECCC-HHHHHHHHHHCCCCEEEEEECCCH-----HHHHHHHCCCCC---CCHHHHHHCCCEEEECC------
T ss_conf 685699983361-218899998408998999916926-----899998469841---12889520088999837------
Q ss_pred CCHHHHHHCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCHHHHCC
Q ss_conf 201333100111233688996289872992599987487357679679
Q gi|255764473|r 232 EFKAREEHVFQPFQVNLSLMSMAHPDALFMHCLPAHRGEEVINEVLDG 279 (306)
Q Consensus 232 ~~~~~~~~~~~~y~i~~~~l~~a~~~~~vmHplP~~rg~EI~~~v~d~ 279 (306)
.. .=-|+.+.++.+|+++++.--|- .+.||+-+.+..
T Consensus 311 -G~--------~~vi~~~h~~~MKdgailaN~GH--fd~EId~~~L~~ 347 (464)
T 3n58_A 311 -GN--------KDVITIDHMRKMKDMCIVGNIGH--FDNEIQVAALRN 347 (464)
T ss_dssp -SS--------SSSBCHHHHHHSCTTEEEEECSS--STTTBTCGGGTT
T ss_pred -CC--------CCCCCHHHHHHHCCCCEEECCCC--CCCHHHHHHHHH
T ss_conf -98--------87468899996558978965567--662230688872
No 80
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=73.70 E-value=4.5 Score=19.34 Aligned_cols=75 Identities=20% Similarity=0.353 Sum_probs=48.1
Q ss_pred CCCCCCCEEEECC-----CCCCCCCHH----HCCCCCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCC
Q ss_conf 1336773046104-----555543101----0012331257652000013210000243201332221366466306873
Q gi|255764473|r 149 GSVKGKLFSWSGD-----GNNILHSLI----EGAARFNYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAH 219 (306)
Q Consensus 149 g~l~~~~i~~vGd-----~~~v~hS~i----~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD 219 (306)
+.+++.+|+++|= .+.+..|-. ..+..-|+++.+.-|..- .+..+..+..+....++.++++++|
T Consensus 314 ~~~~~~~I~IlGlayKp~t~d~R~Sps~~l~~~L~~~g~~V~~yDP~v~------~~~~~~~~~~~~~~~~~~ea~~~aD 387 (450)
T 3gg2_A 314 GNVQGRCVAIWGLSFKPGTDDMREAPSLVLIEKLLEVGCRVRVYDPVAM------KEAQKRLGDKVEYTTDMYDAVRGAE 387 (450)
T ss_dssp TCCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSCH------HHHHHHHGGGSEECSSHHHHTTTCS
T ss_pred HCCCCCCEEEECCCCCCCCHHHCCCHHHHHHHHHHHCCCCEEEECCCCC------HHHHHHHCCCEEEECCHHHHHCCCC
T ss_conf 2025882002324248973111254179999999986995899899788------7899972788077389999970698
Q ss_pred CCCC-CCEEEC
Q ss_conf 3222-100000
Q gi|255764473|r 220 CVFT-DTWISM 229 (306)
Q Consensus 220 ~V~~-~~~~~~ 229 (306)
+|.. ..|...
T Consensus 388 ~iii~t~h~~f 398 (450)
T 3gg2_A 388 ALFHVTEWKEF 398 (450)
T ss_dssp CEEECSCCGGG
T ss_pred EEEEECCCHHH
T ss_conf 89990398575
No 81
>2qu7_A Putative transcriptional regulator; structural genomics, PSI-2, protein structure initiative; 2.30A {Staphylococcus saprophyticus subsp}
Probab=73.60 E-value=4.5 Score=19.32 Aligned_cols=82 Identities=15% Similarity=0.219 Sum_probs=48.1
Q ss_pred CCEEEEEECCCC---CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCC
Q ss_conf 987999942888---35789999898634754333321000012321079999975300101112101320067763012
Q gi|255764473|r 44 GKVLAMIFEKPS---TRTRVSFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTAKVLSRYVDAIVMRTTNHSRLLELTEYA 120 (306)
Q Consensus 44 gk~i~~lF~e~S---tRTR~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~~~ls~~~D~iviR~~~~~~~~~~~~~~ 120 (306)
-++|+++....+ +.-...++.++++.|.+++..+... +..+..++-++ .++..+|++++=..+.. .....+..
T Consensus 8 s~tIgvi~p~~~pf~~~l~~gi~~~a~~~g~~l~v~~~~~-~~~~~~~~l~~--l~~~~vdgiIi~~~~~~-~~~~~~~~ 83 (288)
T 2qu7_A 8 SNIIAFIVPDQNPFFTEVLTEISHECQKHHLHVAVASSEE-NEDKQQDLIET--FVSQNVSAIILVPVKSK-FQMKREWL 83 (288)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHHGGGTCEEEEEECTT-CHHHHHHHHHH--HHHTTEEEEEECCSSSC-CCCCGGGG
T ss_pred CCEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCC-CHHHHHHHHHH--HHHCCCCEEEECCCCHH-HHHHHHHC
T ss_conf 9989999089987999999999999998599999997999-98999999999--99669988997474126-79999746
Q ss_pred CCCEECCCC
Q ss_conf 441240433
Q gi|255764473|r 121 TVPVINALT 129 (306)
Q Consensus 121 ~vpvINa~~ 129 (306)
.+|||-.+.
T Consensus 84 ~iPvV~~~~ 92 (288)
T 2qu7_A 84 KIPIMTLDR 92 (288)
T ss_dssp GSCEEEESC
T ss_pred CCCEEEEEC
T ss_conf 998897302
No 82
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=72.55 E-value=4.2 Score=19.49 Aligned_cols=81 Identities=15% Similarity=0.201 Sum_probs=49.0
Q ss_pred EEEEEEC---CCC-CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCC---HHHHHHC
Q ss_conf 7999942---888-35789999898634754333321000012321079999975300101112101320---0677630
Q gi|255764473|r 46 VLAMIFE---KPS-TRTRVSFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTAKVLSRYVDAIVMRTTNHS---RLLELTE 118 (306)
Q Consensus 46 ~i~~lF~---e~S-tRTR~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~~~ls~~~D~iviR~~~~~---~~~~~~~ 118 (306)
+|+++.- +|. .+-+-.|+.+++++|.+++.+++..+ ..+- ++-.-..++..+|+|++=..+.. ...+.+.
T Consensus 4 ~Ig~~v~~~~~~~~~~~~~~~~~~a~~~G~~~~v~~~~~d-~~~q--~~~i~~li~~~vDgIii~~~d~~~~~~~~~~a~ 80 (313)
T 3m9w_A 4 KIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGN-EETQ--MSQIENMINRGVDVLVIIPYNGQVLSNVVKEAK 80 (313)
T ss_dssp EEEEEESCCSSSTTHHHHHHHHHHHHHTSCEEEEEECTTC-HHHH--HHHHHHHHHTTCSEEEEECSSTTSCHHHHHHHH
T ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCC-HHHH--HHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHH
T ss_conf 9999948899989999999999999973998999959999-9999--999999997699999981762231489999999
Q ss_pred CCCCCEECCCC
Q ss_conf 12441240433
Q gi|255764473|r 119 YATVPVINALT 129 (306)
Q Consensus 119 ~~~vpvINa~~ 129 (306)
...+|||...+
T Consensus 81 ~~gipvV~~d~ 91 (313)
T 3m9w_A 81 QEGIKVLAYDR 91 (313)
T ss_dssp TTTCEEEEESS
T ss_pred HCCCCEEEECC
T ss_conf 86996897035
No 83
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substrate-binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=72.21 E-value=4.8 Score=19.11 Aligned_cols=132 Identities=12% Similarity=0.064 Sum_probs=65.1
Q ss_pred HHHHHCCCCCCEECCCCCCCHHH--HHHHHHHHHHHHC---------C-------------CCCCCCEEEECCCCCCCCC
Q ss_conf 67763012441240433320246--7876557664200---------1-------------3367730461045555431
Q gi|255764473|r 113 LLELTEYATVPVINALTDNTHPC--QIIADIMTFEEHR---------G-------------SVKGKLFSWSGDGNNILHS 168 (306)
Q Consensus 113 ~~~~~~~~~vpvINa~~~~~HPt--QaL~D~~Ti~e~~---------g-------------~l~~~~i~~vGd~~~v~hS 168 (306)
-.+..+...++|.|+-+...-+. .+++=++.+.+.. | .+.++++.++|- +++...
T Consensus 91 d~~~~~~~gi~v~~~~~~~~~~vae~~l~~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Gi~g~-g~ig~~ 169 (330)
T 2gcg_A 91 ALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVGIIGL-GRIGQA 169 (330)
T ss_dssp CHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCCCTTCEEEEECC-SHHHHH
T ss_pred CHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEC-CCHHHH
T ss_conf 7999986798899789842388999999999887632389999997299642343244674212105999801-301134
Q ss_pred HHHCCCCCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCHHHHHHCCCCCCCCH
Q ss_conf 01001233125765200001321000024320133222136646630687332221000000220133310011123368
Q gi|255764473|r 169 LIEGAARFNYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFKAREEHVFQPFQVNL 248 (306)
Q Consensus 169 ~i~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~~~~~~~~~~y~i~~ 248 (306)
....+..+++.+....+..-.+.. .........++++.++.+|+|..-. ...++ ..--+|.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~ll~~sDivv~~l--plt~~---------T~~li~~ 230 (330)
T 2gcg_A 170 IARRLKPFGVQRFLYTGRQPRPEE--------AAEFQAEFVSTPELAAQSDFIVVAC--SLTPA---------TEGLCNK 230 (330)
T ss_dssp HHHHHGGGTCCEEEEESSSCCHHH--------HHTTTCEECCHHHHHHHCSEEEECC--CCCTT---------TTTCBSH
T ss_pred HHHHCCCCCCEEEEEECCCCCHHH--------HHHHHCCCCCHHHHHCCCCEEEECC--CCCCC---------HHHHHHH
T ss_conf 553202346403554114684455--------4432000020466613577899714--68865---------2667409
Q ss_pred HHHHCCCCCCEEECCC
Q ss_conf 8996289872992599
Q gi|255764473|r 249 SLMSMAHPDALFMHCL 264 (306)
Q Consensus 249 ~~l~~a~~~~~vmHpl 264 (306)
+.++.+|+++++--.+
T Consensus 231 ~~l~~mk~ga~lINv~ 246 (330)
T 2gcg_A 231 DFFQKMKETAVFINIS 246 (330)
T ss_dssp HHHHHSCTTCEEEECS
T ss_pred HHHHHCCCCCEEEEEC
T ss_conf 9998568996699947
No 84
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=70.87 E-value=3.9 Score=19.70 Aligned_cols=110 Identities=9% Similarity=0.053 Sum_probs=58.1
Q ss_pred CCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCC---CCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 17844589999999999999999665236665443798799994288---835789999898634754333321000012
Q gi|255764473|r 8 FADLSNISSSNLSCIIEVAKKIKNSSENIFENKPLSGKVLAMIFEKP---STRTRVSFEVAMKHLGGDTIFLSGSEMQLG 84 (306)
Q Consensus 8 ~l~~~dl~~~~i~~ll~~A~~~k~~~~~~~~~~~l~gk~i~~lF~e~---StRTR~SFe~A~~~LG~~~~~~~~~~ss~~ 84 (306)
|+...+|+.+-+..|++ + |..|..++-+| +.+. .....|.+.|..+.....- -.
T Consensus 27 f~G~~~f~~~~l~~L~~------~------------~~~i~~V~T~pdk~~~~~--~v~~~a~~~~ipv~~~~~~---~~ 83 (329)
T 2bw0_A 27 VIGQSLFGQEVYCHLRK------E------------GHEVVGVFTVPDKDGKAD--PLGLEAEKDGVPVFKYSRW---RA 83 (329)
T ss_dssp EECCHHHHHHHHHHHHH------T------------TCEEEEEEECCCCSSCCC--HHHHHHHHHTCCEEECSCC---EE
T ss_pred EECCCHHHHHHHHHHHH------C------------CCCEEEEEECCCCCCCCC--HHHHHHHHHCCCEECCCCC---CC
T ss_conf 99697999999999998------8------------897899990899888989--6999999819988644336---76
Q ss_pred CCCCHHHHHHHHH-HCCCEEEEEECCCCHHHHHHCCCCCCEECCC-C-----CCCHHHH-HHHH
Q ss_conf 3210799999753-0010111210132006776301244124043-3-----3202467-8765
Q gi|255764473|r 85 RAETIGDTAKVLS-RYVDAIVMRTTNHSRLLELTEYATVPVINAL-T-----DNTHPCQ-IIAD 140 (306)
Q Consensus 85 kgEsl~Dt~~~ls-~~~D~iviR~~~~~~~~~~~~~~~vpvINa~-~-----~~~HPtQ-aL~D 140 (306)
+.+...|.+..+. .-.|++|+=....-...++-+.....+||.= + ...+|.| |++.
T Consensus 84 ~~~~~~e~~~~l~~~~~Dl~v~~~~~~iip~~il~~~~~g~iN~HpSlLP~yRG~~pi~waIl~ 147 (329)
T 2bw0_A 84 KGQALPDVVAKYQALGAELNVLPFCSQFIPMEIISAPRHGSIIYHPSLLPRHRGASAINWTLIH 147 (329)
T ss_dssp TTEECHHHHHHHHTTCCSEEEESSCSSCCCHHHHTCSTTCEEEEESSCTTTTBSSCHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHCCCEEEEECCHHHCCHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHC
T ss_conf 1204899999999629699999061243779886347898899947888666785667999975
No 85
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein structure initiative, structural genomics; 1.97A {Lactobacillus brevis atcc 367}
Probab=70.64 E-value=5.2 Score=18.88 Aligned_cols=113 Identities=11% Similarity=0.129 Sum_probs=59.8
Q ss_pred CCEEEEEECCCCC----HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH-HHHHCCCEEEEEECCCCHHHHHHC
Q ss_conf 9879999428883----57899998986347543333210000123210799999-753001011121013200677630
Q gi|255764473|r 44 GKVLAMIFEKPST----RTRVSFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTAK-VLSRYVDAIVMRTTNHSRLLELTE 118 (306)
Q Consensus 44 gk~i~~lF~e~St----RTR~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~~-~ls~~~D~iviR~~~~~~~~~~~~ 118 (306)
-|+|++++.+-|. +..-..+.++.+.|.+++..+... +..+ ....++ .++..+|++++-............
T Consensus 7 S~~Igvivp~~~~~f~~~~i~gi~~~~~~~gy~~~i~~~~~-~~~~---~~~~i~~l~~~~vdgiIl~~~~~~~~~~~~~ 82 (276)
T 3jy6_A 7 SKLIAVIVANIDDYFSTELFKGISSILESRGYIGVLFDANA-DIER---EKTLLRAIGSRGFDGLILQSFSNPQTVQEIL 82 (276)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHHHHHHHTTTCEEEEEECTT-CHHH---HHHHHHHHHTTTCSEEEEESSCCHHHHHHHH
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCC-CHHH---HHHHHHHHHHCCCCEEEEECCCCHHHHHHHH
T ss_conf 99999993999898999999999999998699999994899-9899---9999999996699899995368969999999
Q ss_pred CCCCCEECCCCC---CCHHHHHHHHHHH----HHHHCCCCCCCCEEEECC
Q ss_conf 124412404333---2024678765576----642001336773046104
Q gi|255764473|r 119 YATVPVINALTD---NTHPCQIIADIMT----FEEHRGSVKGKLFSWSGD 161 (306)
Q Consensus 119 ~~~vpvINa~~~---~~HPtQaL~D~~T----i~e~~g~l~~~~i~~vGd 161 (306)
..++|||--+.. ..+|+ ...|-+- +-+++-..-..+|+|++.
T Consensus 83 ~~~iPvV~~~~~~~~~~~~~-V~~d~~~~~~~a~~~L~~~G~~~I~~i~~ 131 (276)
T 3jy6_A 83 HQQMPVVSVDREMDACPWPQ-VVTDNFEAAKAATTAFRQQGYQHVVVLTS 131 (276)
T ss_dssp TTSSCEEEESCCCTTCSSCE-EECCHHHHHHHHHHHHHTTTCCEEEEEEE
T ss_pred HCCCCEEEECCCCCCCCCCE-EEECHHHHHHHHHHHHHHHCCCCCEEECC
T ss_conf 74999999767778889888-99647998777778898735662138705
No 86
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=70.51 E-value=1.3 Score=22.75 Aligned_cols=51 Identities=10% Similarity=0.124 Sum_probs=22.5
Q ss_pred HHCCCCCCCCCCCCCCC----CCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHH
Q ss_conf 63475433332100001----2321079999975300101112101320067763
Q gi|255764473|r 67 KHLGGDTIFLSGSEMQL----GRAETIGDTAKVLSRYVDAIVMRTTNHSRLLELT 117 (306)
Q Consensus 67 ~~LG~~~~~~~~~~ss~----~kgEsl~Dt~~~ls~~~D~iviR~~~~~~~~~~~ 117 (306)
.+-|..|..+|...... ..|-...++..-+..-.|++++=.+....+.+..
T Consensus 50 ~k~G~~V~~~d~~~~k~~~l~~~Ga~~~~s~~e~~~~adiii~~v~~~~a~~~v~ 104 (316)
T 2uyy_A 50 LKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLV 104 (316)
T ss_dssp HHTTCCEEEECSSGGGGHHHHHTTCEECSCHHHHHHHCSEEEECCSSHHHHHHHH
T ss_pred HHCCCEEEEECCCHHHHHHHHHCCCEECCCHHHHHHCCCEEEEECCCCHHHHHHH
T ss_conf 9789969998399999999998599465999999845985999726736679996
No 87
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum 3D7} SCOP: c.2.1.4 c.23.12.3
Probab=69.02 E-value=4 Score=19.69 Aligned_cols=237 Identities=14% Similarity=0.080 Sum_probs=134.2
Q ss_pred CHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE-ECCCCCHHHHHHHHHHHHCCCCCCCCC--C---C----
Q ss_conf 84458999999999999999966523666544379879999-428883578999989863475433332--1---0----
Q gi|255764473|r 10 DLSNISSSNLSCIIEVAKKIKNSSENIFENKPLSGKVLAMI-FEKPSTRTRVSFEVAMKHLGGDTIFLS--G---S---- 79 (306)
Q Consensus 10 ~~~dl~~~~i~~ll~~A~~~k~~~~~~~~~~~l~gk~i~~l-F~e~StRTR~SFe~A~~~LG~~~~~~~--~---~---- 79 (306)
++.++.+.+|+..-..---+.....+....+||+|.+|+.- -.+ .-|-.= -..-+.+|+.|..-+ + +
T Consensus 12 ~LA~~G~~~I~wa~~~MPvL~~lr~~~~~~kPl~G~rI~~~LHlt--~kTAvL-~~tL~~~GAeV~~~~cNp~STQDdvA 88 (479)
T 1v8b_A 12 SLAPFGKMQMEISENEMPGLMRIREEYGKDQPLKNAKITGCLHMT--VECALL-IETLQKLGAQIRWCSCNIYSTADYAA 88 (479)
T ss_dssp GGHHHHHHHHHHHGGGCHHHHHHHHHSTTTCTTTTCEEEEESCCS--HHHHHH-HHHHHHTTCEEEEECSSSSCCCHHHH
T ss_pred HHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCEEEEEEECH--HHHHHH-HHHHHHCCCEEEEEECCCCCCCHHHH
T ss_conf 354766899999997798999999986446999999899998117--989999-99999869869998689764468999
Q ss_pred ---------CCCCCCCCCHHHHHHHHHH----------CCCEEEEE--------E-------------------------
Q ss_conf ---------0001232107999997530----------01011121--------0-------------------------
Q gi|255764473|r 80 ---------EMQLGRAETIGDTAKVLSR----------YVDAIVMR--------T------------------------- 107 (306)
Q Consensus 80 ---------~ss~~kgEsl~Dt~~~ls~----------~~D~iviR--------~------------------------- 107 (306)
..--.||||.++....+.. ..|+|+=- |
T Consensus 89 AAL~~~~Gi~VfA~kget~eey~~~~~~~L~~~~~~d~~P~iiiDDGgDl~~~lh~g~~~e~~~~~~~~l~~~~~~~~~e 168 (479)
T 1v8b_A 89 AAVSTLENVTVFAWKNETLEEYWWCVESALTWGDGDDNGPDMIVDDGGDATLLVHKGVEYEKLYEEKNILPDPEKAKNEE 168 (479)
T ss_dssp HHHTTSTTEEEECCTTCCHHHHHHHHHHHHCCSSSSSCSCSEEEESSSHHHHHHHHHHHHHHHHHHHCCCCCGGGCSSHH
T ss_pred HHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCHH
T ss_conf 99986179369997899989999999998617888778997898055026788760613332210036678876676589
Q ss_pred ----------------------------CCC------CHHHHHHC--CCCCCEECCCCC-------CCHHH-HHHHHHHH
Q ss_conf ----------------------------132------00677630--124412404333-------20246-78765576
Q gi|255764473|r 108 ----------------------------TNH------SRLLELTE--YATVPVINALTD-------NTHPC-QIIADIMT 143 (306)
Q Consensus 108 ----------------------------~~~------~~~~~~~~--~~~vpvINa~~~-------~~HPt-QaL~D~~T 143 (306)
-.+ ..+..+++ ...+|+||--|. +-|=| |.+.|-+
T Consensus 169 ~~~l~~~l~~~~~~~p~~~~~~~~~i~G~sEETTTGV~RL~~m~~~g~L~fP~I~VNDs~tK~~FDN~YGtgqS~~dgi- 247 (479)
T 1v8b_A 169 ERCFLTLLKNSILKNPKKWTNIAKKIIGVSEETTTGVLRLKKMDKQNELLFTAINVNDAVTKQKYDNVYGCRHSLPDGL- 247 (479)
T ss_dssp HHHHHHHHHHHHTTCTTHHHHHHTTCCEEEECSHHHHHHHHHHHHTTCCCSEEEECTTSHHHHTTHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHEECCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHH-
T ss_conf 9999999999987382678888763042026754349999999767987776797266330421024410006589999-
Q ss_pred HHHHCC-CCCCCCEEEECCCCCCCCCHHHCCCCCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCC
Q ss_conf 642001-3367730461045555431010012331257652000013210000243201332221366466306873322
Q gi|255764473|r 144 FEEHRG-SVKGKLFSWSGDGNNILHSLIEGAARFNYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVF 222 (306)
Q Consensus 144 i~e~~g-~l~~~~i~~vGd~~~v~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~ 222 (306)
.+.-+ -+.|++++.+|-+ -+.......+.-+|..|.++-.... ..-.+.-.| +.+ ..++++++.+|+++
T Consensus 248 -~RaTn~llaGK~vVV~GYG-~~GkG~A~~~rg~GA~V~VtEvDPi-----~ALeA~mdG--f~V-~~~~ea~~~~Difv 317 (479)
T 1v8b_A 248 -MRATDFLISGKIVVICGYG-DVGKGCASSMKGLGARVYITEIDPI-----CAIQAVMEG--FNV-VTLDEIVDKGDFFI 317 (479)
T ss_dssp -HHHHCCCCTTSEEEEECCS-HHHHHHHHHHHHHTCEEEEECSCHH-----HHHHHHTTT--CEE-CCHHHHTTTCSEEE
T ss_pred -HHHHCCEECCCEEEEEECC-CCCHHHHHHHHCCCCEEEEEECCCH-----HHHHHHHCC--CEE-EEHHHHHCCCCEEE
T ss_conf -9850605568579998404-1104268776048988999967954-----789988538--763-12678531386999
Q ss_pred CCCEEECCCCCHHHHHHCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCHHHH
Q ss_conf 2100000022013331001112336889962898729925999874873576796
Q gi|255764473|r 223 TDTWISMNQEFKAREEHVFQPFQVNLSLMSMAHPDALFMHCLPAHRGEEVINEVL 277 (306)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~y~i~~~~l~~a~~~~~vmHplP~~rg~EI~~~v~ 277 (306)
|-. .. .=-|+.+-++.+|+++++.--|- -+.||+-+-+
T Consensus 318 TaT-------G~--------~~vI~~eh~~~MKdgAIl~N~GH--fd~EId~~~l 355 (479)
T 1v8b_A 318 TCT-------GN--------VDVIKLEHLLKMKNNAVVGNIGH--FDDEIQVNEL 355 (479)
T ss_dssp ECC-------SS--------SSSBCHHHHTTCCTTCEEEECSS--TTTSBCHHHH
T ss_pred ECC-------CC--------CCCCCHHHHHHHCCCEEEECCCC--CCCEECHHHH
T ss_conf 917-------99--------86236999984138819973577--6410118989
No 88
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=66.69 E-value=2.7 Score=20.73 Aligned_cols=132 Identities=11% Similarity=0.105 Sum_probs=60.4
Q ss_pred CCHHHCCHHHHHHHHHHHHHHHHHHHCCCC-------CCCCCCCEEEEEECCCCCHHH-H-HHHHHHHHCC------CCC
Q ss_conf 784458999999999999999966523666-------544379879999428883578-9-9998986347------543
Q gi|255764473|r 9 ADLSNISSSNLSCIIEVAKKIKNSSENIFE-------NKPLSGKVLAMIFEKPSTRTR-V-SFEVAMKHLG------GDT 73 (306)
Q Consensus 9 l~~~dl~~~~i~~ll~~A~~~k~~~~~~~~-------~~~l~gk~i~~lF~e~StRTR-~-SFe~A~~~LG------~~~ 73 (306)
|.+-|.+.+-+..+-..+..+......... ..-|+|--.+..=........ . -++. -.+.| ++.
T Consensus 35 i~L~Did~~rl~~~~~~~~~~~~~~~~~~~i~~ttd~~~al~~adfVi~t~~vgg~~~~~~~~~i-~ek~gl~~~~~gqe 113 (480)
T 1obb_A 35 VTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFVINTAMVGGHTYLEKVRQI-GEKYGYYRGIDAQE 113 (480)
T ss_dssp EEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEEEECCCTTHHHHHHHHHHH-HHHTTCTTCTTCBT
T ss_pred EEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCCEEEEEEECCCCCCCHHHHHH-HHHCCHHCCCCCCC
T ss_conf 99986987799999999999998729982899968899984799999983432886410355643-33306102768752
Q ss_pred CCC-CCCCC--CCCCCCCHHHHHHHHHHC-CCEEEEEE--CCCCHHHHHHCCCCCCEECCCCCCCHHHHHHHHHH
Q ss_conf 333-21000--012321079999975300-10111210--13200677630124412404333202467876557
Q gi|255764473|r 74 IFL-SGSEM--QLGRAETIGDTAKVLSRY-VDAIVMRT--TNHSRLLELTEYATVPVINALTDNTHPCQIIADIM 142 (306)
Q Consensus 74 ~~~-~~~~s--s~~kgEsl~Dt~~~ls~~-~D~iviR~--~~~~~~~~~~~~~~vpvINa~~~~~HPtQaL~D~~ 142 (306)
... ++..+ .+-.---+.|.++-+..+ .|++++=- |.+-..+.+.+++.+++|+..+.-.. ++-++..+
T Consensus 114 ~~~~G~gg~~~alrtipv~~~i~~~i~~~~P~A~iin~tNP~~ivt~a~~~~~~~~~iGlC~~p~~-~~~la~~L 187 (480)
T 1obb_A 114 FNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAANPIFEGTTLVTRTVPIKAVGFCHGHYG-VMEIVEKL 187 (480)
T ss_dssp TBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECSSCHHHHHHHHHHHSCSEEEEECSGGGH-HHHHHHHT
T ss_pred CCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCEEEEECCCCHH-HHHHHHHH
T ss_conf 578773266631335899999999999869984999956816999999864366528985798315-89999994
No 89
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics, protein structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=65.93 E-value=6.5 Score=18.26 Aligned_cols=114 Identities=7% Similarity=0.050 Sum_probs=63.6
Q ss_pred CCCEEEEEECCCCCH------HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH-HHCCCEEEEEECCC-CHHH
Q ss_conf 798799994288835------789999898634754333321000012321079999975-30010111210132-0067
Q gi|255764473|r 43 SGKVLAMIFEKPSTR------TRVSFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTAKVL-SRYVDAIVMRTTNH-SRLL 114 (306)
Q Consensus 43 ~gk~i~~lF~e~StR------TR~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~~~l-s~~~D~iviR~~~~-~~~~ 114 (306)
+.++|++++..++.+ --.+.+.++++.|.+++...... ..|...+....+ +..+|++++-.... ....
T Consensus 7 rs~~Iglv~~~~~~~~~f~~~~~~gi~~~~~~~g~~l~v~~~~~----~~~~~~~~~~~l~~~~vDgiIi~~~~~~~~~~ 82 (288)
T 3gv0_A 7 KTNVIALVLSVDEELMGFTSQMVFGITEVLSTTQYHLVVTPHIH----AKDSMVPIRYILETGSADGVIISKIEPNDPRV 82 (288)
T ss_dssp CCCEEEEECBCCCCSSCHHHHHHHHHHHHHTTSSCEEEECCBSS----GGGTTHHHHHHHHHTCCSEEEEESCCTTCHHH
T ss_pred CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCC----CHHHHHHHHHHHHHCCCCEEEECCCCCCHHHH
T ss_conf 99969999567766786999999999999998799899996899----96999999999995898689984776764999
Q ss_pred HHHCCCCCCEECCCCC---CCHHH------HHHHHHHHHHHHCCCCCCCCEEEECCCC
Q ss_conf 7630124412404333---20246------7876557664200133677304610455
Q gi|255764473|r 115 ELTEYATVPVINALTD---NTHPC------QIIADIMTFEEHRGSVKGKLFSWSGDGN 163 (306)
Q Consensus 115 ~~~~~~~vpvINa~~~---~~HPt------QaL~D~~Ti~e~~g~l~~~~i~~vGd~~ 163 (306)
...+..++|+|.-+.. ...|+ |+-- .+-+++-.....+|++++...
T Consensus 83 ~~~~~~~iPvV~~~~~~~~~~~~~V~~d~~~~~~---~a~~~L~~~g~~~I~~i~~~~ 137 (288)
T 3gv0_A 83 RFMTERNMPFVTHGRSDMGIEHAFHDFDNEAYAY---EAVERLAQCGRKRIAVIVPPS 137 (288)
T ss_dssp HHHHHTTCCEEEESCCCSSCCCEEEEECHHHHHH---HHHHHHHHTTCCEEEEECCCT
T ss_pred HHHHHCCCCEEEECCCCCCCCCCEEEECHHHHHH---HHHHHHHHCCCCEEEEECCCC
T ss_conf 9999769969991765788998489708999999---999999862996089964875
No 90
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=65.91 E-value=4 Score=19.62 Aligned_cols=33 Identities=9% Similarity=0.030 Sum_probs=18.2
Q ss_pred CCCEEEEEECCCCHH--HHHHCCCCCCEECCCCCC
Q ss_conf 010111210132006--776301244124043332
Q gi|255764473|r 99 YVDAIVMRTTNHSRL--LELTEYATVPVINALTDN 131 (306)
Q Consensus 99 ~~D~iviR~~~~~~~--~~~~~~~~vpvINa~~~~ 131 (306)
-+|++|==+.++... .+++....+|+|-+-+|.
T Consensus 88 ~~DVvIDFS~p~~~~~~~~~~~~~~~plViGTTG~ 122 (288)
T 3ijp_A 88 NTEGILDFSQPQASVLYANYAAQKSLIHIIGTTGF 122 (288)
T ss_dssp SCSEEEECSCHHHHHHHHHHHHHHTCEEEECCCCC
T ss_pred CCCEEEECCCCHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 48889989980676889999987396079830554
No 91
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, structural genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli K12}
Probab=65.83 E-value=6.5 Score=18.25 Aligned_cols=82 Identities=12% Similarity=0.179 Sum_probs=51.7
Q ss_pred CEEEEEECCC----C--CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHH-HHHCCCEEEEEE--CCCCHHHH
Q ss_conf 8799994288----8--3578999989863475433332100001232107999997-530010111210--13200677
Q gi|255764473|r 45 KVLAMIFEKP----S--TRTRVSFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTAKV-LSRYVDAIVMRT--TNHSRLLE 115 (306)
Q Consensus 45 k~i~~lF~e~----S--tRTR~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~~~-ls~~~D~iviR~--~~~~~~~~ 115 (306)
++|++++.+. . .+-..+++.++.+.|.+++......+ .|...+.++. .+..+|++++-. .....+.+
T Consensus 20 ~~Igvi~~~~~~~~~f~~~l~~gi~~~~~~~g~~l~l~~~~~~----~~~~~~~l~~~~~~~~dgiIi~~~~~~~~~~~~ 95 (296)
T 3brq_A 20 QTLGLVVTNTLYHGIYFSELLFHAARMAEEKGRQLLLADGKHS----AEEERQAIQYLLDLRCDAIMIYPRFLSVDEIDD 95 (296)
T ss_dssp CEEEEEECGGGCC--CHHHHHHHHHHHHHHTTCEEEEECCTTS----HHHHHHHHHHHHHTTCSEEEEECSSSCHHHHHH
T ss_pred CEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCC----HHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHH
T ss_conf 9799995886646869999999999999985999999968999----799999999999709873775266677589999
Q ss_pred HHCCCCCCEECCCCC
Q ss_conf 630124412404333
Q gi|255764473|r 116 LTEYATVPVINALTD 130 (306)
Q Consensus 116 ~~~~~~vpvINa~~~ 130 (306)
..+..++||+..+..
T Consensus 96 ~~~~~~ipvV~~~~~ 110 (296)
T 3brq_A 96 IIDAHSQPIMVLNRR 110 (296)
T ss_dssp HHHTCSSCEEEESCC
T ss_pred HHHHCCCCEEEEEEC
T ss_conf 999649988999612
No 92
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=65.80 E-value=3.3 Score=20.21 Aligned_cols=41 Identities=15% Similarity=0.097 Sum_probs=16.9
Q ss_pred HHHHHHHHHC-CCEEEEE--ECCCCHHHHHHCCCCCC---EECCCCC
Q ss_conf 9999975300-1011121--01320067763012441---2404333
Q gi|255764473|r 90 GDTAKVLSRY-VDAIVMR--TTNHSRLLELTEYATVP---VINALTD 130 (306)
Q Consensus 90 ~Dt~~~ls~~-~D~iviR--~~~~~~~~~~~~~~~vp---vINa~~~ 130 (306)
++.+.-+..+ .+++++= .|-+-....+.+++..| +|-+|+.
T Consensus 104 ~~i~~~i~~~~p~~ivivvsNPvd~~~~~~~k~sg~~~~rvig~gt~ 150 (317)
T 3d0o_A 104 KSIVGEVMASKFDGIFLVATNPVDILAYATWKFSGLPKERVIGSGTI 150 (317)
T ss_dssp HHHHHHHHHTTCCSEEEECSSSHHHHHHHHHHHHCCCGGGEEECTTH
T ss_pred HHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEEECCH
T ss_conf 99998864248972899935884179999999709994158984116
No 93
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Porphyromonas gingivalis atcc 33277}
Probab=65.39 E-value=1.7 Score=22.08 Aligned_cols=10 Identities=30% Similarity=0.348 Sum_probs=4.4
Q ss_pred CCCCCCCCCC
Q ss_conf 7543333210
Q gi|255764473|r 70 GGDTIFLSGS 79 (306)
Q Consensus 70 G~~~~~~~~~ 79 (306)
+++++.+.++
T Consensus 76 daDiVVitAG 85 (343)
T 3fi9_A 76 DAKYIVSSGG 85 (343)
T ss_dssp TEEEEEECCC
T ss_pred CCCEEEECCC
T ss_conf 9879998688
No 94
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, sugar binding protein, structural genomics; 2.05A {Burkholderia phymatum STM815}
Probab=64.93 E-value=6.8 Score=18.14 Aligned_cols=83 Identities=11% Similarity=0.117 Sum_probs=50.4
Q ss_pred CCEEEEEECCCC----CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH-HHCCCEEEEEEC--CCCHHHHH
Q ss_conf 987999942888----35789999898634754333321000012321079999975-300101112101--32006776
Q gi|255764473|r 44 GKVLAMIFEKPS----TRTRVSFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTAKVL-SRYVDAIVMRTT--NHSRLLEL 116 (306)
Q Consensus 44 gk~i~~lF~e~S----tRTR~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~~~l-s~~~D~iviR~~--~~~~~~~~ 116 (306)
-++|+++.-.-| .+.--.++.++++.|.+++.+....+.. ..|...+.++.| +..+|++++-.. ++..+..+
T Consensus 8 ~~~Igviip~~~~~~~~~~~~gi~~~~~~~g~~~~i~~~~~~~~-~~e~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~l 86 (290)
T 2rgy_A 8 LGIIGLFVPTFFGSYYGTILKQTDLELRAVHRHVVVATGCGEST-PREQALEAVRFLIGRDCDGVVVISHDLHDEDLDEL 86 (290)
T ss_dssp CCEEEEECSCSCSHHHHHHHHHHHHHHHHTTCEEEEECCCSSSC-HHHHHHHHHHHHHHTTCSEEEECCSSSCHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC-HHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHH
T ss_conf 99899993898788999999999999998699899996889863-09999999999984899889996565897999999
Q ss_pred HCCCCCCEECCC
Q ss_conf 301244124043
Q gi|255764473|r 117 TEYATVPVINAL 128 (306)
Q Consensus 117 ~~~~~vpvINa~ 128 (306)
....+|||--+
T Consensus 87 -~~~~ipvV~i~ 97 (290)
T 2rgy_A 87 -HRMHPKMVFLN 97 (290)
T ss_dssp -HHHCSSEEEES
T ss_pred -HHCCCCEEEEE
T ss_conf -96499789990
No 95
>1yrl_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, knotted protein, oxidoreductase; 2.60A {Escherichia coli}
Probab=64.90 E-value=1.9 Score=21.74 Aligned_cols=32 Identities=19% Similarity=0.143 Sum_probs=18.1
Q ss_pred CCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCC
Q ss_conf 44379879999428883578999989863475433
Q gi|255764473|r 40 KPLSGKVLAMIFEKPSTRTRVSFEVAMKHLGGDTI 74 (306)
Q Consensus 40 ~~l~gk~i~~lF~e~StRTR~SFe~A~~~LG~~~~ 74 (306)
..|+||+|+.+=|-+--| +.....+.-|.+|+
T Consensus 33 ~~lk~k~iaViGyGsQG~---ahAlNLrDSG~~V~ 64 (491)
T 1yrl_A 33 SYLQGKKVVIVGCGAQGL---NQGLNMRDSGLDIS 64 (491)
T ss_dssp GGGTTSCEEEECCSHHHH---HHHHHHHHTTCCEE
T ss_pred HHHCCCEEEEEEECCHHH---HHHHHHHHCCCCEE
T ss_conf 887599799976671349---99867786599779
No 96
>1tjy_A Sugar transport protein; protein-ligand complex, signaling protein; HET: PAV; 1.30A {Salmonella typhimurium LT2} SCOP: c.93.1.1 PDB: 1tm2_A 3ejw_A*
Probab=64.78 E-value=6.8 Score=18.12 Aligned_cols=84 Identities=18% Similarity=0.112 Sum_probs=51.1
Q ss_pred CCCEEEEEECCCC----CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH-HHHHCCCEEEEEECCCCHHHH--
Q ss_conf 7987999942888----357899998986347543333210000123210799999-753001011121013200677--
Q gi|255764473|r 43 SGKVLAMIFEKPS----TRTRVSFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTAK-VLSRYVDAIVMRTTNHSRLLE-- 115 (306)
Q Consensus 43 ~gk~i~~lF~e~S----tRTR~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~~-~ls~~~D~iviR~~~~~~~~~-- 115 (306)
.+|+|+++--..+ ++-+..++.+++.+|.+++.+++.+.+..+- ...++ .++..+|+|++-..+......
T Consensus 2 ~~~~I~~i~~~~~n~f~~~~~~G~~~~a~~~g~~v~~~~~~~~d~~~q---~~~i~~~i~~~vDgiii~~~~~~~~~~~~ 78 (316)
T 1tjy_A 2 SAERIAFIPKLVGVGFFTSGGNGAQEAGKALGIDVTYDGPTEPSVSGQ---VQLVNNFVNQGYDAIIVSAVSPDGLCPAL 78 (316)
T ss_dssp CCCEEEEECSSSSSHHHHHHHHHHHHHHHHHTCEEEECCCSSCCHHHH---HHHHHHHHHTTCSEEEECCSSSSTTHHHH
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHH---HHHHHHHHHCCCCEEEECCCHHHHHHHHH
T ss_conf 777899995889998999999999999998299899997999999999---99999999769998998252011125899
Q ss_pred -HHCCCCCCEECCCC
Q ss_conf -63012441240433
Q gi|255764473|r 116 -LTEYATVPVINALT 129 (306)
Q Consensus 116 -~~~~~~vpvINa~~ 129 (306)
-+....+|||.-..
T Consensus 79 ~~~~~~gipvv~~d~ 93 (316)
T 1tjy_A 79 KRAMQRGVKILTWDS 93 (316)
T ss_dssp HHHHHTTCEEEEESS
T ss_pred HHHHHCCCCEEEECC
T ss_conf 999864995685035
No 97
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A*
Probab=64.41 E-value=3.6 Score=19.93 Aligned_cols=79 Identities=19% Similarity=0.152 Sum_probs=47.6
Q ss_pred CCCCCCCCEEEECC-----CCCCCCCHH----HCCCCCCEEEEEECHHCCCCCCCCH--------HHHHCCCCCCCCCCC
Q ss_conf 01336773046104-----555543101----0012331257652000013210000--------243201332221366
Q gi|255764473|r 148 RGSVKGKLFSWSGD-----GNNILHSLI----EGAARFNYLLNIATPIGSEPRNEYL--------NWARNQGASVALFHD 210 (306)
Q Consensus 148 ~g~l~~~~i~~vGd-----~~~v~hS~i----~~~~~~g~~v~~~~P~~~~~~~~~~--------~~~~~~g~~i~~~~d 210 (306)
.+.+++++|+++|= .+.+.+|-. ..+...|+++.+.-|..-. .+.. .........+.+..+
T Consensus 324 ~~~~~~~~I~ilGlafK~~t~d~R~S~~~~l~~~L~~~g~~v~~~DP~v~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (467)
T 2q3e_A 324 FNTVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPR--EQIVVDLSHPGVSEDDQVSRLVTISKD 401 (467)
T ss_dssp TTCCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSSCH--HHHHHHHCC------CHHHHHEEECSS
T ss_pred CCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCH--HHHHHHHCCCCCCHHHHCCCCEEEECC
T ss_conf 266689989999862068888765685899999999779989998998898--898665145442012321453255089
Q ss_pred HHHHCCCCCCCC-CCCEEE
Q ss_conf 466306873322-210000
Q gi|255764473|r 211 AVQAVKGAHCVF-TDTWIS 228 (306)
Q Consensus 211 ~~eal~~aD~V~-~~~~~~ 228 (306)
+.++++++|+|. ++.|..
T Consensus 402 ~~ea~~~aD~vii~t~h~~ 420 (467)
T 2q3e_A 402 PYEACDGAHAVVICTEWDM 420 (467)
T ss_dssp HHHHHTTCSEEEECSCCGG
T ss_pred HHHHHCCCCEEEEECCCHH
T ss_conf 9999746988999628857
No 98
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=63.79 E-value=7.1 Score=18.00 Aligned_cols=108 Identities=17% Similarity=0.148 Sum_probs=55.6
Q ss_pred CCCCCCEEEECCCCCCCCCHHHCC-CCCC-EEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEE
Q ss_conf 336773046104555543101001-2331-25765200001321000024320133222136646630687332221000
Q gi|255764473|r 150 SVKGKLFSWSGDGNNILHSLIEGA-ARFN-YLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFTDTWI 227 (306)
Q Consensus 150 ~l~~~~i~~vGd~~~v~hS~i~~~-~~~g-~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~~~~~ 227 (306)
.-+..+++++|-+. .++..++++ ..++ -++.+..+.. .....+++..+..+.+..+.+++++++|+|++-.-.
T Consensus 132 ~~~~~~l~iiG~G~-Qa~~~l~a~~~~~~i~~v~v~~r~~----~~~~~f~~~l~~~~~~~~~~~~av~~aDiVitaT~s 206 (312)
T 2i99_A 132 PPSSEVLCILGAGV-QAYSHYEIFTEQFSFKEVRIWNRTK----ENAEKFADTVQGEVRVCSSVQEAVAGADVIITVTLA 206 (312)
T ss_dssp CTTCCEEEEECCSH-HHHHHHHHHHHHCCCSEEEEECSSH----HHHHHHHHHSSSCCEECSSHHHHHTTCSEEEECCCC
T ss_pred CCCCCEEEEECCCH-HHHHHHHHHHHHCCCCEEEEEECCH----HHHHHHHHHHHCCCEECCCHHHHHHCCCEEEEECCC
T ss_conf 77873799966717-7899999999721563699995381----699999998414641338999995159989971477
Q ss_pred ECCCCCHHHHHHCCCCCCCCHHHHHCCCCCCEEECCCCCCCC-CCCCHHHHCC
Q ss_conf 000220133310011123368899628987299259998748-7357679679
Q gi|255764473|r 228 SMNQEFKAREEHVFQPFQVNLSLMSMAHPDALFMHCLPAHRG-EEVINEVLDG 279 (306)
Q Consensus 228 ~~~~~~~~~~~~~~~~y~i~~~~l~~a~~~~~vmHplP~~rg-~EI~~~v~d~ 279 (306)
. + .. ++. +..++++.+...++-..+ .|++++++..
T Consensus 207 ~--~-------P~-----~~~---~~l~~g~~v~~iG~~~~~~~El~~~~~~~ 242 (312)
T 2i99_A 207 T--E-------PI-----LFG---EWVKPGAHINAVGASRPDWRELDDELMKE 242 (312)
T ss_dssp S--S-------CC-----BCG---GGSCTTCEEEECCCCSTTCCSBCHHHHHH
T ss_pred C--C-------CC-----CCH---HHCCCCCEEEECCCCCCCCCCCCHHHHHC
T ss_conf 8--8-------84-----327---54687658974167998603208788836
No 99
>3eph_A TRNA isopentenyltransferase; transferase, alternative initiation, ATP-binding, cytoplasm, mitochondrion, nucleotide-binding, nucleus; 2.95A {Saccharomyces cerevisiae} PDB: 3epj_A 3epk_A* 3epl_A*
Probab=63.15 E-value=5.9 Score=18.55 Aligned_cols=90 Identities=14% Similarity=0.204 Sum_probs=52.8
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH----HHHH----CCCEEEE------EECCC
Q ss_conf 87999942888357899998986347543333210000123210799999----7530----0101112------10132
Q gi|255764473|r 45 KVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTAK----VLSR----YVDAIVM------RTTNH 110 (306)
Q Consensus 45 k~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~~----~ls~----~~D~ivi------R~~~~ 110 (306)
|.|+.+=--.|--|++|.++ |++++|.+|+ ++++|+.||=.+- |++ -... ++|++-. ..+..
T Consensus 3 kli~i~G~TgsGKS~Lai~L-A~~~~geIIs--aDSmQvYkgldI~-TaK~t~~E~~~vpHhli~~~~~~~~~~v~~F~~ 78 (409)
T 3eph_A 3 KVIVIAGTTGVGKSQLSIQL-AQKFNGEVIN--SDSMQVYKDIPII-TNKHPLQEREGIPHHVMNHVDWSEEYYSHRFET 78 (409)
T ss_dssp EEEEEEECSSSSHHHHHHHH-HHHHTEEEEE--CCTTTTBSSCTTT-TTCCCGGGTTTCCEESCSCBCTTSCCCHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHH-HHHCCCEEEC--CCHHHHHCCCCEE-ECCCCHHHHHCCCEEEECCCCCCCCCCHHHHHH
T ss_conf 67999897604499999999-9987998981--0188761999757-789999999189960352448998737999999
Q ss_pred ---CHHHHHHCCCCCCEECCCCCCCHHHHHHHH
Q ss_conf ---006776301244124043332024678765
Q gi|255764473|r 111 ---SRLLELTEYATVPVINALTDNTHPCQIIAD 140 (306)
Q Consensus 111 ---~~~~~~~~~~~vpvINa~~~~~HPtQaL~D 140 (306)
..+.++.....+|||=||++.+ .|+|++
T Consensus 79 ~a~~~i~~i~~rgk~PIiVGGT~~Y--i~aLl~ 109 (409)
T 3eph_A 79 ECMNAIEDIHRRGKIPIVVGGTHYY--LQTLFN 109 (409)
T ss_dssp HHHHHHHHHHTTTCEEEEECSCGGG--GGGGGT
T ss_pred HHHHHHHHHHHCCCCEEEECCCCHH--HHHHHH
T ss_conf 9999999998628965998882179--999974
No 100
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A*
Probab=63.15 E-value=7.3 Score=17.93 Aligned_cols=88 Identities=14% Similarity=0.095 Sum_probs=49.5
Q ss_pred EEEEEECCC---CCHH----HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHC
Q ss_conf 799994288---8357----899998986347543333210000123210799999753001011121013200677630
Q gi|255764473|r 46 VLAMIFEKP---STRT----RVSFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTAKVLSRYVDAIVMRTTNHSRLLELTE 118 (306)
Q Consensus 46 ~i~~lF~e~---StRT----R~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~~~ls~~~D~iviR~~~~~~~~~~~~ 118 (306)
.+..++-.| +-|- -.++..-|.+.|..+...+.. . .+...+..+ +.-.|++++-....-...++-+
T Consensus 28 ~i~~VvT~pd~~~grg~~~~~~~v~~~A~~~~i~~~~~~~~----~-~~~~~~~~~--~~~~dl~i~~~~~~iip~~~l~ 100 (314)
T 1fmt_A 28 NVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVSL----R-PQENQQLVA--ELQADVMVVVAYGLILPKAVLE 100 (314)
T ss_dssp EEEEEECCCCBC------CBCCHHHHHHHHTTCCEECCSCS----C-SHHHHHHHH--HTTCSEEEEESCCSCCCHHHHH
T ss_pred CEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCC----C-CHHHHHHHH--HCCCCEEEEEECCCCCCHHHHH
T ss_conf 77999909998556888488997999999859984035234----6-288999998--5199999997126469999985
Q ss_pred CCCCCEECCC-C-----CCCHHHH-HHHH
Q ss_conf 1244124043-3-----3202467-8765
Q gi|255764473|r 119 YATVPVINAL-T-----DNTHPCQ-IIAD 140 (306)
Q Consensus 119 ~~~vpvINa~-~-----~~~HPtQ-aL~D 140 (306)
.....+||.= + ...+|.| +|+.
T Consensus 101 ~~~~g~iN~H~slLP~yRG~~pi~wail~ 129 (314)
T 1fmt_A 101 MPRLGCINVHGSLLPRWRGAAPIQRSLWA 129 (314)
T ss_dssp SSTTCEEEEESSSTTTTBSSCHHHHHHHH
T ss_pred CCCCCEEECCCCCCCCCCCCCHHHHHHHC
T ss_conf 78977782555547776675889999977
No 101
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=62.63 E-value=4 Score=19.67 Aligned_cols=15 Identities=13% Similarity=0.202 Sum_probs=5.6
Q ss_pred HHHHHHHHHCCCCCC
Q ss_conf 999989863475433
Q gi|255764473|r 60 VSFEVAMKHLGGDTI 74 (306)
Q Consensus 60 ~SFe~A~~~LG~~~~ 74 (306)
...-.++.+-|-+++
T Consensus 80 ~~~~~~al~~gk~Vl 94 (336)
T 2p2s_A 80 AELALRTLDAGKDFF 94 (336)
T ss_dssp HHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHCCCEEE
T ss_conf 999999998599089
No 102
>3crm_A TRNA delta(2)-isopentenylpyrophosphate transferase; ATP-binding, nucleotide-binding, nucleotidyltransferase, tRNA processing; 1.90A {Pseudomonas aeruginosa} PDB: 3crq_A 3crr_A
Probab=62.54 E-value=6.7 Score=18.19 Aligned_cols=92 Identities=12% Similarity=0.093 Sum_probs=55.3
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC-------CCHHHHHHHHHHCCCEEEEEEC-C-------
Q ss_conf 879999428883578999989863475433332100001232-------1079999975300101112101-3-------
Q gi|255764473|r 45 KVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSGSEMQLGRA-------ETIGDTAKVLSRYVDAIVMRTT-N------- 109 (306)
Q Consensus 45 k~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~~ss~~kg-------Esl~Dt~~~ls~~~D~iviR~~-~------- 109 (306)
+.|+.+=--.|--|++|++.| ++++|.+|..| ++|+.|| =|.+|...+--.++|++-.-.. +
T Consensus 6 ~vi~I~GpTasGKt~la~~lA-~~~~~eIIsaD--S~QvYr~l~IgTaKpt~~e~~~i~Hhlid~~~p~~~~sv~~f~~~ 82 (323)
T 3crm_A 6 PAIFLMGPTAAGKTDLAMALA-DALPCELISVD--SALIYRGMDIGTAKPSRELLARYPHRLIDIRDPAESYSAAEFRAD 82 (323)
T ss_dssp EEEEEECCTTSCHHHHHHHHH-HHSCEEEEEEC--TTTTBTTCCTTTTCCCHHHHHHSCEETSSCBCTTSCCCHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHH-HHCCCEEEEEE--HHHHCCCCCEEECCCCHHHHHCCCEEEECCCCCCCCEEHHHHHHH
T ss_conf 689998977116999999999-98799799512--487729996688899999991899734443387767709999999
Q ss_pred -CCHHHHHHCCCCCCEECCCCCCCHHHHHHHHH
Q ss_conf -20067763012441240433320246787655
Q gi|255764473|r 110 -HSRLLELTEYATVPVINALTDNTHPCQIIADI 141 (306)
Q Consensus 110 -~~~~~~~~~~~~vpvINa~~~~~HPtQaL~D~ 141 (306)
...+.++.+...+|||=||+|-+ -|+|++=
T Consensus 83 a~~~i~~i~~~gk~PIiVGGTglY--l~aLl~g 113 (323)
T 3crm_A 83 ALAAMAKATARGRIPLLVGGTMLY--YKALLEG 113 (323)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHH--HHHHHCC
T ss_pred HHHHHHHHHHCCCCEEEECCCHHH--HHHHHCC
T ss_conf 999999998359940897561399--9999839
No 103
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=62.24 E-value=7.6 Score=17.82 Aligned_cols=85 Identities=21% Similarity=0.343 Sum_probs=49.2
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCC--------------------------CCCCCCCCHHHHHHHHHH
Q ss_conf 879999428883578999989863475433332100--------------------------001232107999997530
Q gi|255764473|r 45 KVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSGSE--------------------------MQLGRAETIGDTAKVLSR 98 (306)
Q Consensus 45 k~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~~--------------------------ss~~kgEsl~Dt~~~ls~ 98 (306)
-.|+.+|+-.-.=|--..-. ---.|+++.+.+++ .....+|.+.+.. ....
T Consensus 142 GVIgiIyesrPnvtv~~aal--alksGNavILKgg~ea~~Sn~~l~~ii~eAl~~~Gl~~~~~~~~~~~~v~elL-~~~~ 218 (463)
T 2h5g_A 142 GVLLVIFESRPDCLPQVAAL--AIASGNGLLLKGGKEAAHSNRILHLLTQEALSIHGVKEAVQLVNTREEVEDLC-RLDK 218 (463)
T ss_dssp CEEEEEESSCTTHHHHHHHH--HHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHTTTCGGGEEECCTTCCC--------C
T ss_pred EEEEEECCCCCHHHHHHHHH--HHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHH-HCCC
T ss_conf 99999228884239999999--99719953523737888889999999999887529970389547478899997-3567
Q ss_pred CCCEEEEEECCCCHHHHHHCCCC-CCEECCCCCCCH
Q ss_conf 01011121013200677630124-412404333202
Q gi|255764473|r 99 YVDAIVMRTTNHSRLLELTEYAT-VPVINALTDNTH 133 (306)
Q Consensus 99 ~~D~iviR~~~~~~~~~~~~~~~-vpvINa~~~~~H 133 (306)
|+|+++.|... +......+.++ +||+--|+|..|
T Consensus 219 ~IDliiprGg~-~li~~V~~~A~~vPVi~~g~G~ch 253 (463)
T 2h5g_A 219 MIDLIIPRGSS-QLVRDIQKAAKGIPVMGHSEGICH 253 (463)
T ss_dssp CCSEEEEESCH-HHHHHHHHHCSSSCBCSCSCCCEE
T ss_pred CCCEEEECCCC-HHHHHHHHHCCCCCEEEECCCCCC
T ss_conf 88589977871-577799986468887871687531
No 104
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, MFE-1, fatty acid beta oxidation, oxidoreductase; 1.90A {Rattus norvegicus}
Probab=61.79 E-value=7.7 Score=17.77 Aligned_cols=30 Identities=13% Similarity=0.091 Sum_probs=14.6
Q ss_pred HHHHHHHHC--CCEEEEEECCCCHHHHHHCCC
Q ss_conf 999975300--101112101320067763012
Q gi|255764473|r 91 DTAKVLSRY--VDAIVMRTTNHSRLLELTEYA 120 (306)
Q Consensus 91 Dt~~~ls~~--~D~iviR~~~~~~~~~~~~~~ 120 (306)
+..+-++.+ .++|+.=..+.-.+.++++..
T Consensus 131 ~v~~~le~~~~~~~IlaSNTSsl~i~~la~~~ 162 (463)
T 1zcj_A 131 KVFAELSALCKPGAFLCTNTSALNVDDIASST 162 (463)
T ss_dssp HHHHHHHHHSCTTCEEEECCSSSCHHHHHTTS
T ss_pred HHHHHHHHHHCCCCEEEECCCCCCHHHHHHHC
T ss_conf 99999997727876464036767799998645
No 105
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens AM1} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=60.57 E-value=4.1 Score=19.62 Aligned_cols=81 Identities=22% Similarity=0.065 Sum_probs=51.3
Q ss_pred HHHHH-CCCCCCCCEEEECCCCCCCCCHHHCCCCCCEEEEEECHHCCCCCCCCHHHHHC-CC-----CCCCCCCCHHHHC
Q ss_conf 66420-01336773046104555543101001233125765200001321000024320-13-----3222136646630
Q gi|255764473|r 143 TFEEH-RGSVKGKLFSWSGDGNNILHSLIEGAARFNYLLNIATPIGSEPRNEYLNWARN-QG-----ASVALFHDAVQAV 215 (306)
Q Consensus 143 Ti~e~-~g~l~~~~i~~vGd~~~v~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~-~g-----~~i~~~~d~~eal 215 (306)
...++ .++++|+++.+.|-.+.+.......+.+-|.++.++.-..-.. .+..+.... .+ ..+....+..+++
T Consensus 108 ~~~~~~~~~l~gK~~lVtGatggiG~a~A~~la~~Ga~V~i~~R~~e~~-~~~a~~l~~~~~~~~~~~D~s~~~~~~~~~ 186 (287)
T 1lu9_A 108 LVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKA-QAAADSVNKRFKVNVTAAETADDASRAEAV 186 (287)
T ss_dssp HHHHHTTSCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHHHHHHHHTCCCEEEECCSHHHHHHHT
T ss_pred HHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHHHHCCCEEEEEEECCCHHHHHHHH
T ss_conf 9999649998999899985876999999999998699899995999999-999886540488489998437478999985
Q ss_pred CCCCCCCCC
Q ss_conf 687332221
Q gi|255764473|r 216 KGAHCVFTD 224 (306)
Q Consensus 216 ~~aD~V~~~ 224 (306)
.++|+++..
T Consensus 187 ~~~DIlinn 195 (287)
T 1lu9_A 187 KGAHFVFTA 195 (287)
T ss_dssp TTCSEEEEC
T ss_pred CCCCEEEEC
T ss_conf 899899989
No 106
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenase; HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=59.80 E-value=4.7 Score=19.17 Aligned_cols=71 Identities=10% Similarity=0.069 Sum_probs=30.3
Q ss_pred HHHHHHHHHHC-CCEEEEE--ECCCCHHHHHHCCCCCC---EECCCCC--CCHHHHHHHHHHHHHHHCCCCCCCCEEEEC
Q ss_conf 79999975300-1011121--01320067763012441---2404333--202467876557664200133677304610
Q gi|255764473|r 89 IGDTAKVLSRY-VDAIVMR--TTNHSRLLELTEYATVP---VINALTD--NTHPCQIIADIMTFEEHRGSVKGKLFSWSG 160 (306)
Q Consensus 89 l~Dt~~~ls~~-~D~iviR--~~~~~~~~~~~~~~~vp---vINa~~~--~~HPtQaL~D~~Ti~e~~g~l~~~~i~~vG 160 (306)
+++.+.-+..+ .|++++= -|-+-..+.+.+.+..| ||-.|+- +.-=.+.|++.+-+ .-+......+|
T Consensus 102 ~~~i~~~i~~~~p~~ivivvsNPvd~~t~~~~k~sg~~~~rvig~gt~LDs~R~~~~la~~l~v-----~~~~v~~~ViG 176 (309)
T 1hyh_A 102 VQSVGTNLKESGFHGVLVVISNPVDVITALFQHVTGFPAHKVIGTGTLLDTARMQRAVGEAFDL-----DPRSVSGYNLG 176 (309)
T ss_dssp HHHHHHHHHHTTCCSEEEECSSSHHHHHHHHHHHHCCCGGGEEECTTHHHHHHHHHHHHHHHTC-----CGGGCBCCEEB
T ss_pred HHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCHHHEEEHHHHHHHHHHHHHHHHHCCC-----CCCCEEEEEEC
T ss_conf 8999998750498329998178507888888861699778854100047899999999986189-----85531567872
Q ss_pred CCCC
Q ss_conf 4555
Q gi|255764473|r 161 DGNN 164 (306)
Q Consensus 161 d~~~ 164 (306)
.|+.
T Consensus 177 eHg~ 180 (309)
T 1hyh_A 177 EHGN 180 (309)
T ss_dssp CTTT
T ss_pred CCCC
T ss_conf 7799
No 107
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, structural genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus JCSC1435}
Probab=59.27 E-value=8.6 Score=17.49 Aligned_cols=82 Identities=12% Similarity=0.117 Sum_probs=50.8
Q ss_pred CCEEEEEECCCCC---------HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH-HHCCCEEEEEECC-CCH
Q ss_conf 9879999428883---------5789999898634754333321000012321079999975-3001011121013-200
Q gi|255764473|r 44 GKVLAMIFEKPST---------RTRVSFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTAKVL-SRYVDAIVMRTTN-HSR 112 (306)
Q Consensus 44 gk~i~~lF~e~St---------RTR~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~~~l-s~~~D~iviR~~~-~~~ 112 (306)
.++|++++..... +--.+++.++.+.|.+++.+..... +|..++....+ +..+|++++-... ...
T Consensus 22 s~~Igli~~~~~~~~~~~pf~~~~~~~i~~~~~~~g~~~~l~~~~~~----~~~~~~~~~~l~~~~vdgiIi~~~~~~~~ 97 (305)
T 3huu_A 22 TLTIGLIQKSSAPEIRQNPFNSDVLNGINQACNVRGYSTRMTVSENS----GDLYHEVKTMIQSKSVDGFILLYSLKDDP 97 (305)
T ss_dssp CCEEEEECSCCSHHHHTSHHHHHHHHHHHHHHHHHTCEEEECCCSSH----HHHHHHHHHHHHTTCCSEEEESSCBTTCH
T ss_pred CCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCC----HHHHHHHHHHHHHCCCCEEEECCCCCCHH
T ss_conf 99799996776532237989999999999999975998999957886----68999999999847875498337778768
Q ss_pred HHHHHCCCCCCEECCCC
Q ss_conf 67763012441240433
Q gi|255764473|r 113 LLELTEYATVPVINALT 129 (306)
Q Consensus 113 ~~~~~~~~~vpvINa~~ 129 (306)
..+..+...+|++--+.
T Consensus 98 ~~~~l~~~~ip~v~~~~ 114 (305)
T 3huu_A 98 IEHLLNEFKVPYLIVGK 114 (305)
T ss_dssp HHHHHHHTTCCEEEESC
T ss_pred HHHHHHHCCCCEEEECC
T ss_conf 99999864998899815
No 108
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding protein, alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=58.83 E-value=8.7 Score=17.44 Aligned_cols=79 Identities=14% Similarity=0.200 Sum_probs=44.8
Q ss_pred EEEECCCCCHH-------HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEE-CCCC---HHHHH
Q ss_conf 99942888357-------8999989863475433332100001232107999997530010111210-1320---06776
Q gi|255764473|r 48 AMIFEKPSTRT-------RVSFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTAKVLSRYVDAIVMRT-TNHS---RLLEL 116 (306)
Q Consensus 48 ~~lF~e~StRT-------R~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~~~ls~~~D~iviR~-~~~~---~~~~~ 116 (306)
..+|..|+..| .-.++.|++++|.++..++.....- .-++..-..++...|.+++=. .... .+.+.
T Consensus 5 sVvf~~P~~~~~pf~~~v~~g~~~aA~~~G~~l~v~~~~~d~~---~q~~~i~~~i~~~~~~~~i~~~~~~~~~~~il~~ 81 (350)
T 3h75_A 5 SVVFLNPGNSTETFWVSYSQFMQAAARDLGLDLRILYAERDPQ---NTLQQARELFQGRDKPDYLMLVNEQYVAPQILRL 81 (350)
T ss_dssp EEEEEECSCTTCHHHHHHHHHHHHHHHHHTCEEEEEECTTCHH---HHHHHHHHHHHSSSCCSEEEEECCSSHHHHHHHH
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHH---HHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHH
T ss_conf 9999758988898999999999999997399899995899999---9999999999569986999967832036999999
Q ss_pred HCCCCCCEECCCC
Q ss_conf 3012441240433
Q gi|255764473|r 117 TEYATVPVINALT 129 (306)
Q Consensus 117 ~~~~~vpvINa~~ 129 (306)
++...+|||....
T Consensus 82 a~~~gIpvv~vd~ 94 (350)
T 3h75_A 82 SQGSGIKLFIVNS 94 (350)
T ss_dssp HTTSCCEEEEEES
T ss_pred HHHCCCEEEEECC
T ss_conf 9986994999468
No 109
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain, oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=58.73 E-value=2.5 Score=21.02 Aligned_cols=32 Identities=22% Similarity=0.239 Sum_probs=15.6
Q ss_pred CCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCC
Q ss_conf 44379879999428883578999989863475433
Q gi|255764473|r 40 KPLSGKVLAMIFEKPSTRTRVSFEVAMKHLGGDTI 74 (306)
Q Consensus 40 ~~l~gk~i~~lF~e~StRTR~SFe~A~~~LG~~~~ 74 (306)
.+|+||+|+.+=|=+--| +-....+.-|.+|+
T Consensus 12 ~~l~~k~iaviGyGsQG~---a~AlNlrDsG~~V~ 43 (338)
T 1np3_A 12 SIIQGKKVAIIGYGSQGH---AHACNLKDSGVDVT 43 (338)
T ss_dssp HHHHTSCEEEECCSHHHH---HHHHHHHHTTCCEE
T ss_pred HHHCCCEEEEEEECHHHH---HHHHHHHHCCCCEE
T ss_conf 887899899976672769---98866685499779
No 110
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with cofactor and product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=57.07 E-value=6.7 Score=18.18 Aligned_cols=78 Identities=14% Similarity=0.039 Sum_probs=45.3
Q ss_pred CCCCCCCCEEEECC-----CCCCCCCH----HHCCCCCCEEEEEECHHC--CCCCCCCHHHHH--CCCCCCCCCCCHHHH
Q ss_conf 01336773046104-----55554310----100123312576520000--132100002432--013322213664663
Q gi|255764473|r 148 RGSVKGKLFSWSGD-----GNNILHSL----IEGAARFNYLLNIATPIG--SEPRNEYLNWAR--NQGASVALFHDAVQA 214 (306)
Q Consensus 148 ~g~l~~~~i~~vGd-----~~~v~hS~----i~~~~~~g~~v~~~~P~~--~~~~~~~~~~~~--~~g~~i~~~~d~~ea 214 (306)
...+.+.+|+++|= .+.+..|- ++.+...|+++.+.-|.- .........+.. ..........+++++
T Consensus 308 ~~~~~~~ki~ilGlafK~~t~D~R~Spa~~li~~L~~~g~~V~~~DP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 387 (436)
T 1mv8_A 308 ITSHDTRKVGLLGLSFKAGTDDLRESPLVELAEMLIGKGYELRIFDRNVEYARVHGANKEYIESKIPHVSSLLVSDLDEV 387 (436)
T ss_dssp HTTSSCCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECHHHHHHTTSSSCHHHHHHTSHHHHTTBCSCHHHH
T ss_pred HHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHCCCHHHHCCCCCCCCCCEECCCHHHH
T ss_conf 76305878966447558999854467099999999978898999899988777502012220012444453013889999
Q ss_pred CCCCCCCCCCC
Q ss_conf 06873322210
Q gi|255764473|r 215 VKGAHCVFTDT 225 (306)
Q Consensus 215 l~~aD~V~~~~ 225 (306)
++++|+|..-.
T Consensus 388 ~~~~D~iii~t 398 (436)
T 1mv8_A 388 VASSDVLVLGN 398 (436)
T ss_dssp HHHCSEEEECS
T ss_pred HHCCCEEEEEC
T ss_conf 85599999906
No 111
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 helix bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=56.67 E-value=4.6 Score=19.25 Aligned_cols=73 Identities=12% Similarity=0.067 Sum_probs=39.1
Q ss_pred CCCCCCEEEECCCCCCCCCHHHCC-CCCCE-EEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCC
Q ss_conf 336773046104555543101001-23312-576520000132100002432013322213664663068733222
Q gi|255764473|r 150 SVKGKLFSWSGDGNNILHSLIEGA-ARFNY-LLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFT 223 (306)
Q Consensus 150 ~l~~~~i~~vGd~~~v~hS~i~~~-~~~g~-~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~ 223 (306)
.-+..+++++|-+. .++..++++ ..++. ++.+..+..-.......+..+..|..+....+.+++++++|+|.+
T Consensus 126 ~~da~~l~iiGaG~-QA~~~l~Al~~v~~i~~V~v~~r~~~~~~~~~~~~~~~~g~~v~~~~s~e~av~~ADII~t 200 (350)
T 1x7d_A 126 RPNARKMALIGNGA-QSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITT 200 (350)
T ss_dssp CTTCCEEEEECCST-THHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEE
T ss_pred CCCCCEEEEECCCH-HHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCEECCCHHHHHHCCCEEEE
T ss_conf 67886389973618-7899999998518954999984681589999987654069775655999999731883576
No 112
>2iks_A DNA-binding transcriptional dual regulator; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 1.85A {Escherichia coli K12}
Probab=56.25 E-value=9.6 Score=17.17 Aligned_cols=82 Identities=13% Similarity=0.206 Sum_probs=49.4
Q ss_pred CEEEEEECCCCC----HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH-HHHHCCCEEEEEEC--CCCHHHHHH
Q ss_conf 879999428883----57899998986347543333210000123210799999-75300101112101--320067763
Q gi|255764473|r 45 KVLAMIFEKPST----RTRVSFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTAK-VLSRYVDAIVMRTT--NHSRLLELT 117 (306)
Q Consensus 45 k~i~~lF~e~St----RTR~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~~-~ls~~~D~iviR~~--~~~~~~~~~ 117 (306)
++|++++...+. .-...++.++.+.|-+++.+..... . +...+... .++..+|++++-.. .........
T Consensus 21 ~~Igvi~p~~~~~~~~~l~~~i~~~a~~~g~~~~l~~~~~~-~---~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~ 96 (293)
T 2iks_A 21 RSIGLVIPDLENTSYTRIANYLERQARQRGYQLLIACSEDQ-P---DNEMRCIEHLLQRQVDAIIVSTSLPPEHPFYQRW 96 (293)
T ss_dssp CEEEEEESCSCSHHHHHHHHHHHHHHHHTTCEEEEEECTTC-H---HHHHHHHHHHHHTTCSEEEECCSSCTTCHHHHTT
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCC-H---HHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHH
T ss_conf 98999949998879999999999999986999999968999-8---9999999999966998999953654457999999
Q ss_pred CCCCCCEECCCCC
Q ss_conf 0124412404333
Q gi|255764473|r 118 EYATVPVINALTD 130 (306)
Q Consensus 118 ~~~~vpvINa~~~ 130 (306)
....+||+-....
T Consensus 97 ~~~~~pvv~~~~~ 109 (293)
T 2iks_A 97 ANDPFPIVALDRA 109 (293)
T ss_dssp TTSSSCEEEEESC
T ss_pred HHCCCCEEEEEEC
T ss_conf 8479828999624
No 113
>2qiw_A PEP phosphonomutase; NP_600288.1, structural genomics, joint center for structural genomics, JCSG; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=56.14 E-value=8.9 Score=17.38 Aligned_cols=46 Identities=17% Similarity=0.182 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 99999999966523666544379879999428883578999989863475433332100
Q gi|255764473|r 22 IIEVAKKIKNSSENIFENKPLSGKVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSGSE 80 (306)
Q Consensus 22 ll~~A~~~k~~~~~~~~~~~l~gk~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~~ 80 (306)
.-.++..|++..+++. ++ ++...|.=.|. ..+.+.|.+++..+...
T Consensus 5 ~~~~a~~f~~~~~~g~---~l---~~p~a~D~~sA-------rl~e~aGf~ai~~s~~~ 50 (255)
T 2qiw_A 5 LKSLATKFASDHESGK---LL---VLPTVWDTWSA-------GLVEEAGFSGLTIGSHP 50 (255)
T ss_dssp HHHHHHHHHHHHHTCC---CE---ECCEESSHHHH-------HHHHHTTCSCEEECHHH
T ss_pred HHHHHHHHHHHHHCCC---CE---EEECCCCHHHH-------HHHHHCCCCEEEECHHH
T ss_conf 6999999999864799---18---99668689999-------99998599999977599
No 114
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, protein structure initiative; 1.88A {Caenorhabditis elegans}
Probab=56.01 E-value=5.1 Score=18.96 Aligned_cols=80 Identities=20% Similarity=0.234 Sum_probs=47.6
Q ss_pred CCCCCCCCEEEECC-----CCCCCCCH----HHCCCCCCEEEEEECHHCCCCCCCCHH------HHHCCCCCCCCCCCHH
Q ss_conf 01336773046104-----55554310----100123312576520000132100002------4320133222136646
Q gi|255764473|r 148 RGSVKGKLFSWSGD-----GNNILHSL----IEGAARFNYLLNIATPIGSEPRNEYLN------WARNQGASVALFHDAV 212 (306)
Q Consensus 148 ~g~l~~~~i~~vGd-----~~~v~hS~----i~~~~~~g~~v~~~~P~~~~~~~~~~~------~~~~~g~~i~~~~d~~ 212 (306)
.+.+++.+|+++|= .+.+..|- +..+...|+++.+.-|.- .+.+... ........+....++.
T Consensus 330 ~~~~~~~~I~ilGlafK~~t~d~R~Sps~~li~~L~~~g~~V~~~DP~v--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 407 (481)
T 2o3j_A 330 FNTVTDKKIAIFGFAFKKNTGDTRESSAIHVIKHLMEEHAKLSVYDPKV--QKSQMLNDLASVTSAQDVERLITVESDPY 407 (481)
T ss_dssp TTCCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSS--CHHHHHHHHHHHSCHHHHHHHEEEESSHH
T ss_pred CCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCC--CHHHHHHHHHHHHHHHHHHHHCEECCCHH
T ss_conf 4887776799973125777730103508999999998799899989968--87887666642000344332031038999
Q ss_pred HHCCCCCCCC-CCCEEEC
Q ss_conf 6306873322-2100000
Q gi|255764473|r 213 QAVKGAHCVF-TDTWISM 229 (306)
Q Consensus 213 eal~~aD~V~-~~~~~~~ 229 (306)
++++++|+|. ...|...
T Consensus 408 ~a~~~aD~vIi~t~h~ef 425 (481)
T 2o3j_A 408 AAARGAHAIVVLTEWDEF 425 (481)
T ss_dssp HHHTTCSEEEECSCCGGG
T ss_pred HHHCCCCEEEEECCCHHH
T ss_conf 996579889996498677
No 115
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=55.93 E-value=4.2 Score=19.51 Aligned_cols=22 Identities=18% Similarity=0.228 Sum_probs=10.5
Q ss_pred CCCEEEEEECCC---CHHHHHHCCC
Q ss_conf 010111210132---0067763012
Q gi|255764473|r 99 YVDAIVMRTTNH---SRLLELTEYA 120 (306)
Q Consensus 99 ~~D~iviR~~~~---~~~~~~~~~~ 120 (306)
-.|.+++=.+.. ..+..++.+.
T Consensus 75 ~aD~viv~vks~~~~~~~~~l~p~l 99 (359)
T 1bg6_A 75 DADVILIVVPAIHHASIAANIASYI 99 (359)
T ss_dssp TCSEEEECSCGGGHHHHHHHHGGGC
T ss_pred CCCEEEEEECCHHHHHHHHHHHHHC
T ss_conf 5988999736702799999999866
No 116
>2fn9_A Ribose ABC transporter, periplasmic ribose- binding protein; RBP, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima MSB8} PDB: 2fn8_A*
Probab=55.24 E-value=10 Score=17.06 Aligned_cols=82 Identities=13% Similarity=0.207 Sum_probs=49.5
Q ss_pred CCCCEEEEEECCCC----CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH-HHHHCCCEEEEEECCCCHHH--
Q ss_conf 37987999942888----357899998986347543333210000123210799999-75300101112101320067--
Q gi|255764473|r 42 LSGKVLAMIFEKPS----TRTRVSFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTAK-VLSRYVDAIVMRTTNHSRLL-- 114 (306)
Q Consensus 42 l~gk~i~~lF~e~S----tRTR~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~~-~ls~~~D~iviR~~~~~~~~-- 114 (306)
++| +|+++.-.-+ .+=..+++.+++..|.+++.++...+ -+.....+. .++..+|++++-........
T Consensus 1 ~~g-~Igvvvp~~~~~f~~~~~~gi~~~a~~~g~~~~~~~~~~~----~~~~~~~i~~l~~~~vdgii~~~~~~~~~~~~ 75 (290)
T 2fn9_A 1 MKG-KMAIVISTLNNPWFVVLAETAKQRAEQLGYEATIFDSQND----TAKESAHFDAIIAAGYDAIIFNPTDADGSIAN 75 (290)
T ss_dssp --C-EEEEEESCSSSHHHHHHHHHHHHHHHHTTCEEEEEECTTC----HHHHHHHHHHHHHTTCSEEEECCSCTTTTHHH
T ss_pred CCC-EEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCC----HHHHHHHHHHHHHCCCCEEEECCCCCCCCHHH
T ss_conf 989-8999928898999999999999999986998999969999----89999999999974998553013332110899
Q ss_pred -HHHCCCCCCEECCC
Q ss_conf -76301244124043
Q gi|255764473|r 115 -ELTEYATVPVINAL 128 (306)
Q Consensus 115 -~~~~~~~vpvINa~ 128 (306)
+.+....+|||.-.
T Consensus 76 l~~~~~~gipvV~~~ 90 (290)
T 2fn9_A 76 VKRAKEAGIPVFCVD 90 (290)
T ss_dssp HHHHHHTTCCEEEES
T ss_pred HHHHHHCCCEEEEEC
T ss_conf 999985698399965
No 117
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=55.22 E-value=10 Score=17.06 Aligned_cols=32 Identities=19% Similarity=0.192 Sum_probs=15.0
Q ss_pred CCCCCCEEEECCCCCCCCCHHHCCCCCCEEEEE
Q ss_conf 336773046104555543101001233125765
Q gi|255764473|r 150 SVKGKLFSWSGDGNNILHSLIEGAARFNYLLNI 182 (306)
Q Consensus 150 ~l~~~~i~~vGd~~~v~hS~i~~~~~~g~~v~~ 182 (306)
.+.|+++++.||+.. +.++...+.-+|+++..
T Consensus 357 ~l~GKrvaI~gdp~~-~~~la~fL~ElG~ep~~ 388 (519)
T 1qgu_B 357 WLHGKKFGLYGDPDF-VMGLTRFLLELGCEPTV 388 (519)
T ss_dssp HHTTCEEEEESCHHH-HHHHHHHHHHTTCEEEE
T ss_pred HCCCCEEEEECCCHH-HHHHHHHHHHCCCEEEE
T ss_conf 718967999888345-89999999987994569
No 118
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, PSI-2, protein structure initiative; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=54.40 E-value=2.1 Score=21.45 Aligned_cols=65 Identities=14% Similarity=0.029 Sum_probs=35.9
Q ss_pred CCCEEEECCCCCCCCCHHHCCCCCC-EEEEEECHHCCCCCCCCHHHHHCCCC-----CCCCCCCHHHHCCCCCCCCC
Q ss_conf 7730461045555431010012331-25765200001321000024320133-----22213664663068733222
Q gi|255764473|r 153 GKLFSWSGDGNNILHSLIEGAARFN-YLLNIATPIGSEPRNEYLNWARNQGA-----SVALFHDAVQAVKGAHCVFT 223 (306)
Q Consensus 153 ~~~i~~vGd~~~v~hS~i~~~~~~g-~~v~~~~P~~~~~~~~~~~~~~~~g~-----~i~~~~d~~eal~~aD~V~~ 223 (306)
..||+++|- +++.+..++.+.+.+ .++.++.... +..+.....+. .+.....+.+.+++.|+|+.
T Consensus 5 ~~kI~ViGa-G~vG~~va~~L~~~~~~~v~~~dr~~-----~~~~~~~~~~~~~~~~d~~d~~~l~~~l~~~DvVi~ 75 (118)
T 3ic5_A 5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDL-----AALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVIS 75 (118)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCH-----HHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred CCCEEEECC-CHHHHHHHHHHHHCCCCCEEEECCCH-----HHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEE
T ss_conf 078899867-99999999999878998478612656-----664100012222111244899999999859989998
No 119
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=53.76 E-value=11 Score=16.91 Aligned_cols=13 Identities=8% Similarity=-0.107 Sum_probs=6.8
Q ss_pred CHHHCCCCCCEEE
Q ss_conf 1010012331257
Q gi|255764473|r 168 SLIEGAARFNYLL 180 (306)
Q Consensus 168 S~i~~~~~~g~~v 180 (306)
++-..+.+||+++
T Consensus 199 a~~Yf~~~~gl~~ 211 (312)
T 2o1e_A 199 AFGYLAKEYGLKQ 211 (312)
T ss_dssp TTHHHHHHTTCEE
T ss_pred CCHHHHHHCCCEE
T ss_conf 0010687689658
No 120
>3dcm_X AdoMet, uncharacterized protein TM_1570; trefoil knot, spout mtase, adoMet binding, transferase; HET: SAM; 2.00A {Thermotoga maritima}
Probab=53.05 E-value=5.1 Score=18.95 Aligned_cols=101 Identities=11% Similarity=0.032 Sum_probs=49.9
Q ss_pred CCCHHHCCCCCCE-EEEEECHHCC-----------CCCCCCHHHH---HCCCCCCCCCCCHHHHCCCCCCCCC-------
Q ss_conf 4310100123312-5765200001-----------3210000243---2013322213664663068733222-------
Q gi|255764473|r 166 LHSLIEGAARFNY-LLNIATPIGS-----------EPRNEYLNWA---RNQGASVALFHDAVQAVKGAHCVFT------- 223 (306)
Q Consensus 166 ~hS~i~~~~~~g~-~v~~~~P~~~-----------~~~~~~~~~~---~~~g~~i~~~~d~~eal~~aD~V~~------- 223 (306)
.|+...++.-||+ ++.++.|... ++..+-...+ +.--....+++++++|+++.+.++-
T Consensus 31 ihdIARamkn~Gl~~l~lV~P~~~q~~l~~~~~~~W~~~~a~~~a~~a~dvL~~akV~~sLeeAl~d~~~~~g~s~~vva 110 (192)
T 3dcm_X 31 VHDIARTARTYNLKGYYIVTNLRAQQDMVSKMLKFWREGFGSRYNPSRAESLKLVKLKSYLEDVLEDIESVEGERPLIFF 110 (192)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCHHHHHHHHHHHHHHHTSGGGGTCSSSHHHHTTEEEESSHHHHHHHHHHHHSSCCEEEE
T ss_pred HHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHCEEECCHHHHHHHHHHHCCCCCEEEE
T ss_conf 79999999867997279967626778889888750777045550889899982187868899999878875288626860
Q ss_pred -CCEEEC---CCCCH---H--HHHH----CCCCCCCCHHHHHCCCCCCEEECCCCCCCC
Q ss_conf -100000---02201---3--3310----011123368899628987299259998748
Q gi|255764473|r 224 -DTWISM---NQEFK---A--REEH----VFQPFQVNLSLMSMAHPDALFMHCLPAHRG 269 (306)
Q Consensus 224 -~~~~~~---~~~~~---~--~~~~----~~~~y~i~~~~l~~a~~~~~vmHplP~~rg 269 (306)
..+.+. .-... . .+.. +-..++++.+-|+.|+ .+++|-|.+-+
T Consensus 111 Tsar~r~~~~~~~e~~~~l~~~~~~valvFGE~~GLtneeL~~cd---~iL~~Ip~~~~ 166 (192)
T 3dcm_X 111 TSAKKRENDISFEEGRRIIIETEKPVLILLGTGWGLPDEILEISD---YVLEPIRAQSD 166 (192)
T ss_dssp CCSSCCSSCBCHHHHHHHHHHCCSCEEEEECCTTCCCHHHHTTCS---EEBCCTTTTSS
T ss_pred CCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHCC---EEEEECCCCCC
T ss_conf 456657899899999999873388189993477799999998539---77863579999
No 121
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X- RAY crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=52.95 E-value=4.9 Score=19.05 Aligned_cols=13 Identities=15% Similarity=0.041 Sum_probs=7.2
Q ss_pred CCCEEEEEECCCC
Q ss_conf 0101112101320
Q gi|255764473|r 99 YVDAIVMRTTNHS 111 (306)
Q Consensus 99 ~~D~iviR~~~~~ 111 (306)
-+|++++=.|...
T Consensus 57 ~aD~Iil~vP~~~ 69 (279)
T 2f1k_A 57 TAKIIFLCTPIQL 69 (279)
T ss_dssp TCSEEEECSCHHH
T ss_pred CCCEEEECCCCCH
T ss_conf 5674320586301
No 122
>2q7d_A Inositol-tetrakisphosphate 1-kinase; inositol kinase, ITPK1, inositol 1,3,4- 5/6-kinase, inositol phosphate, inositolphosphate, polyphosphate; HET: ANP; 1.60A {Homo sapiens} PDB: 2qb5_A* 2odt_X
Probab=51.48 E-value=8 Score=17.68 Aligned_cols=43 Identities=16% Similarity=0.126 Sum_probs=33.4
Q ss_pred CCCCCCCEEEEEECC--CCCHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 544379879999428--8835789999898634754333321000
Q gi|255764473|r 39 NKPLSGKVLAMIFEK--PSTRTRVSFEVAMKHLGGDTIFLSGSEM 81 (306)
Q Consensus 39 ~~~l~gk~i~~lF~e--~StRTR~SFe~A~~~LG~~~~~~~~~~s 81 (306)
...++||.|+..+.| -|..+--+|..++++.|..++.+|....
T Consensus 13 ~~~~~~~riG~~~~e~k~s~~~~~~~~~~~~~~G~~~v~iD~~~~ 57 (346)
T 2q7d_A 13 QTFLKGKRVGYWLSEKKIKKLNFQAFAELCRKRGMEVVQLNLSRP 57 (346)
T ss_dssp GGGGTTCEEEEECCHHHHHHHTHHHHHHHHHTTTCEEEECCTTSC
T ss_pred HHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC
T ss_conf 876424779999643157564289999999978977999259999
No 123
>3d02_A Putative LACI-type transcriptional regulator; periplasmic sugar-binding protein, structural genomics; HET: MSE GOL; 1.30A {Klebsiella pneumoniae subsp}
Probab=51.18 E-value=10 Score=16.99 Aligned_cols=70 Identities=16% Similarity=0.136 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCH---HHHHHCCCCCCEECCCC
Q ss_conf 7899998986347543333210000123210799999753001011121013200---67763012441240433
Q gi|255764473|r 58 TRVSFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTAKVLSRYVDAIVMRTTNHSR---LLELTEYATVPVINALT 129 (306)
Q Consensus 58 TR~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~~~ls~~~D~iviR~~~~~~---~~~~~~~~~vpvINa~~ 129 (306)
-.-.++.|++++|.++.++.....+..+-...-+ ..++..+|+|++=..+... ..+.++...+|||.-.+
T Consensus 22 ~~~G~~~aa~~~g~~~~~~~~~~~d~~~q~~~i~--~~i~~~vDgIii~~~d~~~~~~~l~~~~~~gIpVv~~~~ 94 (303)
T 3d02_A 22 MGEGVVQAGKEFNLNASQVGPSSTDAPQQVKIIE--DLIARKVDAITIVPNDANVLEPVFKKARDAGIVVLTNES 94 (303)
T ss_dssp HHHHHHHHHHHTTEEEEEECCSSSCHHHHHHHHH--HHHHTTCSEEEECCSCHHHHHHHHHHHHHTTCEEEEESC
T ss_pred HHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHH--HHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEEE
T ss_conf 9999999999829989999689999999999999--999759999999568837779999999976987999963
No 124
>1l7b_A DNA ligase; BRCT, autostructure, structural genomics, NESG, PSI, protein structure initiative, northeast structural genomics consortium; HET: DNA; NMR {Thermus thermophilus} SCOP: c.15.1.2
Probab=51.07 E-value=11 Score=16.91 Aligned_cols=66 Identities=20% Similarity=0.275 Sum_probs=37.7
Q ss_pred CCCCCCCEEEEE-ECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHH
Q ss_conf 544379879999-4288835789999898634754333321000012321079999975300101112101320067763
Q gi|255764473|r 39 NKPLSGKVLAMI-FEKPSTRTRVSFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTAKVLSRYVDAIVMRTTNHSRLLELT 117 (306)
Q Consensus 39 ~~~l~gk~i~~l-F~e~StRTR~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~~~ls~~~D~iviR~~~~~~~~~~~ 117 (306)
..+|.|+++|.- ++. .+|--.+..+.++||.+..- ++...|++|+-......+....
T Consensus 5 ~~~l~G~~~v~TG~~~---~~R~e~~~~i~~~Gg~v~~~-------------------Vs~~t~~LV~g~~~gsK~~kA~ 62 (92)
T 1l7b_A 5 GEALKGLTFVITGELS---RPREEVKALLRRLGAKVTDS-------------------VSRKTSYLVVGENPGSKLEKAR 62 (92)
T ss_dssp CCSSTTCEEECSTTTT---SCHHHHHHHHHHTTCEEESC-------------------CSSSCCCBEECSSSSTTHHHHH
T ss_pred CCCCCCCEEEEECCCC---CCHHHHHHHHHHCCCEEECE-------------------EECCEEEEEECCCCCHHHHHHH
T ss_conf 9877898999989857---79999999999869999070-------------------3277608998899880999999
Q ss_pred CCCCCCEECC
Q ss_conf 0124412404
Q gi|255764473|r 118 EYATVPVINA 127 (306)
Q Consensus 118 ~~~~vpvINa 127 (306)
+ ..||||+-
T Consensus 63 ~-~gI~Ii~e 71 (92)
T 1l7b_A 63 A-LGVPTLTE 71 (92)
T ss_dssp C-SSSCCEEH
T ss_pred H-HCCCEECH
T ss_conf 9-09949639
No 125
>2vk2_A YTFQ, ABC transporter periplasmic-binding protein YTFQ; transport protein, galactofuranose; HET: GZL; 1.20A {Escherichia coli}
Probab=51.06 E-value=10 Score=16.93 Aligned_cols=80 Identities=15% Similarity=0.099 Sum_probs=47.1
Q ss_pred EEEEEECC--CCCHH--HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH-HHHHCCCEEEEEECCCC---HHHHHH
Q ss_conf 79999428--88357--899998986347543333210000123210799999-75300101112101320---067763
Q gi|255764473|r 46 VLAMIFEK--PSTRT--RVSFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTAK-VLSRYVDAIVMRTTNHS---RLLELT 117 (306)
Q Consensus 46 ~i~~lF~e--~StRT--R~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~~-~ls~~~D~iviR~~~~~---~~~~~~ 117 (306)
+|+.+... ..+++ .-+++.++.++|..++.++...+.-. -...++ .++..+|+|++=..+.. ...+.+
T Consensus 4 ~Ig~~~~~~~~~~~~~~~~~~~~~a~~~G~~~~~~~~~~~~~~----q~~~i~~li~~~vDgIii~~~~~~~~~~~i~~a 79 (306)
T 2vk2_A 4 TVGFSQVGSESGWRAAETNVAKSEAEKRGITLKIADGQQKQEN----QIKAVRSFVAQGVDAIFIAPVVATGWEPVLKEA 79 (306)
T ss_dssp EEEEEECCCCSHHHHHHHHHHHHHHHHHTCEEEEEECTTCHHH----HHHHHHHHHHHTCSEEEECCSSSSSCHHHHHHH
T ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHH----HHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHH
T ss_conf 9999979998899999999999999986998999959999999----999999999769899999078821159999999
Q ss_pred CCCCCCEECCCC
Q ss_conf 012441240433
Q gi|255764473|r 118 EYATVPVINALT 129 (306)
Q Consensus 118 ~~~~vpvINa~~ 129 (306)
....+|||.-.+
T Consensus 80 ~~~gipvv~~d~ 91 (306)
T 2vk2_A 80 KDAEIPVFLLDR 91 (306)
T ss_dssp HHTTCCEEEESS
T ss_pred HHCCCEEEEECC
T ss_conf 976981999814
No 126
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=50.42 E-value=9.2 Score=17.28 Aligned_cols=38 Identities=16% Similarity=0.105 Sum_probs=15.7
Q ss_pred CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 35789999898634754333321000012321079999
Q gi|255764473|r 56 TRTRVSFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTA 93 (306)
Q Consensus 56 tRTR~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~ 93 (306)
+-++...-.++.+-|-+++---|-..++...+.+.+.+
T Consensus 78 ~~~H~~~~~~al~~Gk~V~~EKP~a~~~~ea~~l~~~a 115 (359)
T 3m2t_A 78 PQLHFEMGLLAMSKGVNVFVEKPPCATLEELETLIDAA 115 (359)
T ss_dssp HHHHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHH
T ss_conf 35435899999843980999853303179999988665
No 127
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=50.26 E-value=9 Score=17.33 Aligned_cols=99 Identities=15% Similarity=0.058 Sum_probs=50.2
Q ss_pred CCCCCCEEEECCCCCCCCCHHHCCCCCCEEEEEECHHCCCCCCCCHHHH--HCCCCCCCCCCCHHHHCCCCCCCCCCCEE
Q ss_conf 3367730461045555431010012331257652000013210000243--20133222136646630687332221000
Q gi|255764473|r 150 SVKGKLFSWSGDGNNILHSLIEGAARFNYLLNIATPIGSEPRNEYLNWA--RNQGASVALFHDAVQAVKGAHCVFTDTWI 227 (306)
Q Consensus 150 ~l~~~~i~~vGd~~~v~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~~~--~~~g~~i~~~~d~~eal~~aD~V~~~~~~ 227 (306)
.+...++.++|.+. +...-+..+.++|..+......... .+.++.. ............+.+.+.++|++++..++
T Consensus 164 ~v~p~kv~ilG~G~-~g~~a~~~a~~~Ga~v~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DIvI~~~~~ 240 (361)
T 1pjc_A 164 GVKPGKVVILGGGV-VGTEAAKMAVGLGAQVQIFDINVER--LSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLV 240 (361)
T ss_dssp TBCCCEEEEECCSH-HHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCC
T ss_pred CCCCCEEEEECCCE-ECHHHHHHHHHCCCEEEEECCCHHH--HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEEEC
T ss_conf 98873499965841-0125789998569879996375889--99988750640222024466788874136457754322
Q ss_pred ECCCCCHHHHHHCCCCCCCCHHHHHCCCCCCEEE
Q ss_conf 0002201333100111233688996289872992
Q gi|255764473|r 228 SMNQEFKAREEHVFQPFQVNLSLMSMAHPDALFM 261 (306)
Q Consensus 228 ~~~~~~~~~~~~~~~~y~i~~~~l~~a~~~~~vm 261 (306)
.-. ..+.-++++.++..++..++.
T Consensus 241 ~g~----------~~p~li~~~~~~~mk~gsVIv 264 (361)
T 1pjc_A 241 PGR----------RAPILVPASLVEQMRTGSVIV 264 (361)
T ss_dssp TTS----------SCCCCBCHHHHTTSCTTCEEE
T ss_pred CCC----------CCCCHHHHHHHHCCCCCCEEE
T ss_conf 898----------898100588874679987899
No 128
>1m1n_B Nitrogenase molybdenum-iron protein beta chain; atomic resolution, FEMO cofactor, nitrogen fixation, central nitrogen ligand; HET: HCA CLF CFN; 1.16A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B* 1g20_B* 1fp4_B* 1g21_B*
Probab=50.11 E-value=12 Score=16.54 Aligned_cols=34 Identities=18% Similarity=0.121 Sum_probs=17.6
Q ss_pred CCCCCCCEEEECCCCCCCCCHHHCCCCCCEEEEEE
Q ss_conf 13367730461045555431010012331257652
Q gi|255764473|r 149 GSVKGKLFSWSGDGNNILHSLIEGAARFNYLLNIA 183 (306)
Q Consensus 149 g~l~~~~i~~vGd~~~v~hS~i~~~~~~g~~v~~~ 183 (306)
..+.|+++++.||+.. +.++...+.-+|+++..+
T Consensus 359 ~~l~GKrvaI~gd~~~-~~~l~~fL~ElG~~~~~v 392 (522)
T 1m1n_B 359 TWLHGKRFALWGDPDF-VMGLVKFLLELGCEPVHI 392 (522)
T ss_dssp HHHTTCEEEEECCHHH-HHHHHHHHHHTTCEEEEE
T ss_pred HHHCCCEEEEECCCHH-HHHHHHHHHHCCCCEEEE
T ss_conf 9857987999898488-999999999869961699
No 129
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=50.03 E-value=7.2 Score=17.96 Aligned_cols=15 Identities=33% Similarity=0.399 Sum_probs=6.2
Q ss_pred EECCCCCHHHHHHHH
Q ss_conf 942888357899998
Q gi|255764473|r 50 IFEKPSTRTRVSFEV 64 (306)
Q Consensus 50 lF~e~StRTR~SFe~ 64 (306)
++.=||..+|--++.
T Consensus 90 i~avps~~~~~~l~~ 104 (366)
T 1evy_A 90 LFVIPTQFLRGFFEK 104 (366)
T ss_dssp EECCCHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHH
T ss_conf 023769999999998
No 130
>1xhl_A Short-chain dehydrogenase/reductase family member (5L265), putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=49.19 E-value=4.1 Score=19.55 Aligned_cols=34 Identities=21% Similarity=0.299 Sum_probs=17.8
Q ss_pred CCCCCEEEEEECCCCCHHHHHH--HHHHHHCCCCCCCCCC
Q ss_conf 4379879999428883578999--9898634754333321
Q gi|255764473|r 41 PLSGKVLAMIFEKPSTRTRVSF--EVAMKHLGGDTIFLSG 78 (306)
Q Consensus 41 ~l~gk~i~~lF~e~StRTR~SF--e~A~~~LG~~~~~~~~ 78 (306)
.|+||++ ++ --.+| -+-+ -.+..+-|++|+..+-
T Consensus 23 rL~GKva-lV--TGas~-GIG~aiA~~la~~Ga~V~i~~r 58 (297)
T 1xhl_A 23 RFSGKSV-II--TGSSN-GIGRSAAVIFAKEGAQVTITGR 58 (297)
T ss_dssp CCTTCEE-EE--TTCSS-HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEE-EE--ECCCC-HHHHHHHHHHHHCCCEEEEEEC
T ss_conf 8899889-99--47786-8999999999987998999989
No 131
>3brs_A Periplasmic binding protein/LACI transcriptional regulator; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans isdg}
Probab=48.98 E-value=12 Score=16.42 Aligned_cols=86 Identities=13% Similarity=0.075 Sum_probs=49.9
Q ss_pred CCCCEEEEEEC--CCC----CHHHHHHHHHHHHCCCCCCCCCCCC-CCCCCCCCHHHHHH-HHHHCCCEEEEEECCCCHH
Q ss_conf 37987999942--888----3578999989863475433332100-00123210799999-7530010111210132006
Q gi|255764473|r 42 LSGKVLAMIFE--KPS----TRTRVSFEVAMKHLGGDTIFLSGSE-MQLGRAETIGDTAK-VLSRYVDAIVMRTTNHSRL 113 (306)
Q Consensus 42 l~gk~i~~lF~--e~S----tRTR~SFe~A~~~LG~~~~~~~~~~-ss~~kgEsl~Dt~~-~ls~~~D~iviR~~~~~~~ 113 (306)
++..+++.+-. +.| -.-+-.++.|++++|.++..+.+.. ....+ -.+.++ .++..+|+|++=..+....
T Consensus 3 ~k~~~i~~i~~~~d~s~~f~~~v~~G~~~aa~~~g~~~~~~~~~~~~d~~~---q~~~i~~li~~~~dgIii~~~~~~~~ 79 (289)
T 3brs_A 3 LKQYYMICIPKVLDDSSDFWSVLVEGAQMAAKEYEIKLEFMAPEKEEDYLV---QNELIEEAIKRKPDVILLAAADYEKT 79 (289)
T ss_dssp --CCEEEEECSCCCSSSHHHHHHHHHHHHHHHHHTCEEEECCCSSTTCHHH---HHHHHHHHHHTCCSEEEECCSCTTTT
T ss_pred CCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHH---HHHHHHHHHHCCCCEEEEECCCHHHH
T ss_conf 776499999846999987999999999999998299899996899889999---99999999976999999968841536
Q ss_pred ---HHHHCCCCCCEECCCCC
Q ss_conf ---77630124412404333
Q gi|255764473|r 114 ---LELTEYATVPVINALTD 130 (306)
Q Consensus 114 ---~~~~~~~~vpvINa~~~ 130 (306)
.+.+....+|||.-.++
T Consensus 80 ~~~l~~a~~~gIpvv~~d~~ 99 (289)
T 3brs_A 80 YDAAKEIKDAGIKLIVIDSG 99 (289)
T ss_dssp HHHHTTTGGGTCEEEEESSC
T ss_pred HHHHHHHHHCCCCEEEEECC
T ss_conf 99999999759987999514
No 132
>3g1w_A Sugar ABC transporter; sugar-binding protein, target 11229F, transport protein, structural genomics, PSI-2; 2.02A {Bacillus halodurans c-125}
Probab=48.83 E-value=13 Score=16.41 Aligned_cols=69 Identities=14% Similarity=0.225 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCHH---HHHHCCCCCCEECC
Q ss_conf 578999989863475433332100001232107999997530010111210132006---77630124412404
Q gi|255764473|r 57 RTRVSFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTAKVLSRYVDAIVMRTTNHSRL---LELTEYATVPVINA 127 (306)
Q Consensus 57 RTR~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~~~ls~~~D~iviR~~~~~~~---~~~~~~~~vpvINa 127 (306)
+-+..++.|++++|.++..+.+.+.+..+-.+.-+ ..++..+|+|++=..+...+ ..-+....+||+--
T Consensus 21 ~v~~G~~~aa~~~g~~l~~~~~~~~d~~~q~~~l~--~~i~~~~dgIii~~~d~~~~~~~l~~~~~~gIpvv~~ 92 (305)
T 3g1w_A 21 RCLKGFEDAAQALNVTVEYRGAAQYDIQEQITVLE--QAIAKNPAGIAISAIDPVELTDTINKAVDAGIPIVLF 92 (305)
T ss_dssp HHHHHHHHHHHHHTCEEEEEECSSSCHHHHHHHHH--HHHHHCCSEEEECCSSTTTTHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHH--HHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEE
T ss_conf 99999999999729989999799999999999999--9997698999997885676899999999769956887
No 133
>2h0a_A TTHA0807, transcriptional regulator; repressor, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=48.79 E-value=13 Score=16.40 Aligned_cols=111 Identities=11% Similarity=0.045 Sum_probs=58.2
Q ss_pred EEEEEECCCCC----HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH-HHCCCEEEEEECC-CCHHHHHHCC
Q ss_conf 79999428883----5789999898634754333321000012321079999975-3001011121013-2006776301
Q gi|255764473|r 46 VLAMIFEKPST----RTRVSFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTAKVL-SRYVDAIVMRTTN-HSRLLELTEY 119 (306)
Q Consensus 46 ~i~~lF~e~St----RTR~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~~~l-s~~~D~iviR~~~-~~~~~~~~~~ 119 (306)
||++++-.-|. +--..++.++.+.|.+++.++... ....- +...+.+ +..+|++++-..+ .....+....
T Consensus 1 TIgvi~p~~~~~f~~~li~gi~~~a~~~gy~l~~~~~~~-~~~~~---~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~ 76 (276)
T 2h0a_A 1 TVSVLLPFVATEFYRRLVEGIEGVLLEQRYDLALFPILS-LARLK---RYLENTTLAYLTDGLILASYDLTERFEEGRLP 76 (276)
T ss_dssp CEEEEECCSCCHHHHHHHHHHHHHHGGGTCEEEECCCCS-CCCCC------------CCCSEEEEESCCCC------CCS
T ss_pred CEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCC-CHHHH---HHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH
T ss_conf 989997888788999999999999998699899997899-87999---99999998559998999547799899999864
Q ss_pred CCCCEECCCCC-CCHHHHHHHHHHH----HHHHCCCCCCCCEEEECC
Q ss_conf 24412404333-2024678765576----642001336773046104
Q gi|255764473|r 120 ATVPVINALTD-NTHPCQIIADIMT----FEEHRGSVKGKLFSWSGD 161 (306)
Q Consensus 120 ~~vpvINa~~~-~~HPtQaL~D~~T----i~e~~g~l~~~~i~~vGd 161 (306)
..+|||..+.. ..+|+ +-.|-+- +-++.-.....++.++|.
T Consensus 77 ~~iPvV~~~~~~~~~~~-V~~D~~~a~~~~~~~L~~~g~~~i~~i~~ 122 (276)
T 2h0a_A 77 TERPVVLVDAQNPRYDS-VYLDNRLGGRLAGAYLARFPGPIFAIAVE 122 (276)
T ss_dssp CSSCEEEESSCCTTSEE-EEECSHHHHHHHHHHHTTSSSCEEEEEEC
T ss_pred CCCCEEEEEECCCCCCE-EEECCHHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf 39948999413688898-99565899999999998718962699824
No 134
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=48.01 E-value=4 Score=19.62 Aligned_cols=20 Identities=20% Similarity=0.219 Sum_probs=7.6
Q ss_pred CCHHHHHHCCCCCC---EECCCC
Q ss_conf 20067763012441---240433
Q gi|255764473|r 110 HSRLLELTEYATVP---VINALT 129 (306)
Q Consensus 110 ~~~~~~~~~~~~vp---vINa~~ 129 (306)
+-....+.+.+..| +|-+|+
T Consensus 127 d~~~~~~~k~sg~~~~~vig~gt 149 (316)
T 1ldn_A 127 DILTYATWKFSGLPHERVIGSGT 149 (316)
T ss_dssp HHHHHHHHHHHTCCGGGEEECTT
T ss_pred CHHHHHHHHHHCCCCCCEECCCC
T ss_conf 37889999984989611664655
No 135
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii ME49} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 1sov_A 1sow_A* 3czm_A*
Probab=47.95 E-value=6.7 Score=18.18 Aligned_cols=41 Identities=12% Similarity=0.255 Sum_probs=17.6
Q ss_pred HHHHHHHHHHC-CCEEEEE--ECCCCHHHHHHCCCCCC---EECCCC
Q ss_conf 79999975300-1011121--01320067763012441---240433
Q gi|255764473|r 89 IGDTAKVLSRY-VDAIVMR--TTNHSRLLELTEYATVP---VINALT 129 (306)
Q Consensus 89 l~Dt~~~ls~~-~D~iviR--~~~~~~~~~~~~~~~vp---vINa~~ 129 (306)
+++.+.-+..+ .+++++= .|-+-....+.+.+..| ||-.|+
T Consensus 112 ~~~i~~~i~~~~p~~ivlvvtNPvd~~t~v~~k~sg~p~~rvig~gt 158 (331)
T 1pzg_A 112 IREIGQNIKKYCPKTFIIVVTNPLDCMVKVMCEASGVPTNMICGMAC 158 (331)
T ss_dssp HHHHHHHHHHHCTTCEEEECCSSHHHHHHHHHHHHCCCGGGEEECCH
T ss_pred HHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 99999988605996199994582567999999972998323434121
No 136
>1wcw_A Uroporphyrinogen III synthase; congenital erythropoietic porphyria, structural genomics, riken structural genomics/proteomics initiative; 1.30A {Thermus thermophilus} PDB: 1wd7_A 1wcx_A
Probab=46.97 E-value=13 Score=16.22 Aligned_cols=63 Identities=16% Similarity=0.182 Sum_probs=46.9
Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEC
Q ss_conf 3798799994288835789999898634754333321000012321079999975300101112101
Q gi|255764473|r 42 LSGKVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTAKVLSRYVDAIVMRTT 108 (306)
Q Consensus 42 l~gk~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~~~ls~~~D~iviR~~ 108 (306)
+.|+.|+.. +.|-.-.|.....++|+.++.+..-.......+...|..+.+..-+|.+|.=..
T Consensus 6 ~~~~r~~~~----~~r~~e~~~~lle~~G~~pi~~P~i~i~~~p~~~~~~~~~~~~~~~D~vifTS~ 68 (261)
T 1wcw_A 6 EDAVRVAYA----GLRRKEAFKALAEKLGFTPLLFPVQATEKVPVPEYRDQVRALAQGVDLFLATTG 68 (261)
T ss_dssp --CCEEEEC----CSTTHHHHHHHHHHTTCEEEECCCEEEEECCGGGGHHHHHHHHTCCSEEEECCH
T ss_pred CCCCEEEEC----CHHHHHHHHHHHHHCCCEEEECCHHHEECCCCHHHHHHHHHHCCCCCEEEEECH
T ss_conf 058289861----323289999999977994998054662658921457899973279999999798
No 137
>3foz_A TRNA delta(2)-isopentenylpyrophosphate transferase; nucleoside modification, isopentenyl-tRNA transferase, MIAA, transferase/RNA complex; 2.50A {Escherichia coli k-12} PDB: 2zxu_A* 2zm5_A
Probab=46.47 E-value=14 Score=16.17 Aligned_cols=91 Identities=13% Similarity=0.142 Sum_probs=53.7
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC-------CCHHHHHHHHHHCCCEEEEEEC-C-------
Q ss_conf 879999428883578999989863475433332100001232-------1079999975300101112101-3-------
Q gi|255764473|r 45 KVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSGSEMQLGRA-------ETIGDTAKVLSRYVDAIVMRTT-N------- 109 (306)
Q Consensus 45 k~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~~ss~~kg-------Esl~Dt~~~ls~~~D~iviR~~-~------- 109 (306)
|.|+.+=--.|--|++|.+.| ++++|.++..| ++|+.|| =|.++..++=-.++|++-.-.. +
T Consensus 11 ~vi~I~GpTasGKs~La~~lA-~~~~~eIIs~D--S~QvYk~l~IgTaKp~~~e~~~i~Hhlid~~~p~e~~sv~~f~~~ 87 (316)
T 3foz_A 11 KAIFLMGPTASGKTALAIELR-KILPVELISVD--SALIYKGMDIGTAKPNAEELLAAPHRLLDIRDPSQAYSAADFRRD 87 (316)
T ss_dssp EEEEEECCTTSCHHHHHHHHH-HHSCEEEEECC--TTTTBTTCCTTTTCCCHHHHHHSCEETSSCBCTTSCCCHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHH-HHCCCEEEECC--HHHHHCCCCEEECCCCHHHHHCCCEEEECCCCCCCCEEHHHHHHH
T ss_conf 569998988327999999999-98699799402--687619998777899999992799777456688875529999999
Q ss_pred -CCHHHHHHCCCCCCEECCCCCCCHHHHHHHH
Q ss_conf -2006776301244124043332024678765
Q gi|255764473|r 110 -HSRLLELTEYATVPVINALTDNTHPCQIIAD 140 (306)
Q Consensus 110 -~~~~~~~~~~~~vpvINa~~~~~HPtQaL~D 140 (306)
...+.++.+...+||+=+|+|.+ -|+|++
T Consensus 88 a~~~i~~i~~~~k~pIlVGGTglY--l~all~ 117 (316)
T 3foz_A 88 ALAEMADITAAGRIPLLVGGTMLY--FKALLE 117 (316)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHH--HHHHHS
T ss_pred HHHHHHHHHHCCCCCEEECCCHHH--HHHHHC
T ss_conf 998999999659970897351789--999982
No 138
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=46.36 E-value=8.4 Score=17.53 Aligned_cols=18 Identities=33% Similarity=0.433 Sum_probs=9.2
Q ss_pred CCCEEEECCC-----CCCCCCHH
Q ss_conf 7730461045-----55543101
Q gi|255764473|r 153 GKLFSWSGDG-----NNILHSLI 170 (306)
Q Consensus 153 ~~~i~~vGd~-----~~v~hS~i 170 (306)
|+...+++|. ||+..-++
T Consensus 223 gK~pVvv~d~pGFi~NRi~~~~~ 245 (460)
T 3k6j_A 223 KKLPVLVGNCKSFVFNRLLHVYF 245 (460)
T ss_dssp TCEEEEESSCCHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCEEHHHHHHHHH
T ss_conf 88058834668731888999999
No 139
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium LT2}
Probab=46.21 E-value=6.7 Score=18.19 Aligned_cols=39 Identities=10% Similarity=0.067 Sum_probs=17.4
Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 379879999428883578999989863475433332100
Q gi|255764473|r 42 LSGKVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSGSE 80 (306)
Q Consensus 42 l~gk~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~~ 80 (306)
|+.+-+=.++--..+.++..--.++.+-|-+++---|-.
T Consensus 83 l~~~~iDaV~I~Tp~~~H~~~~~~al~~GkhVl~EKPla 121 (357)
T 3ec7_A 83 INDKDVEVVIITASNEAHADVAVAALNANKYVFCEKPLA 121 (357)
T ss_dssp HHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESSSC
T ss_pred HCCCCCCEEEECCCCCCCHHHHHHHHHCCCEEEECCCCH
T ss_conf 659998889988985000045788985177699758813
No 140
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=46.15 E-value=8.2 Score=17.62 Aligned_cols=11 Identities=9% Similarity=0.407 Sum_probs=6.1
Q ss_pred CCEEEEEECCC
Q ss_conf 10111210132
Q gi|255764473|r 100 VDAIVMRTTNH 110 (306)
Q Consensus 100 ~D~iviR~~~~ 110 (306)
.|++++=.+.+
T Consensus 83 aDvVivavka~ 93 (404)
T 3c7a_A 83 ADVVILTVPAF 93 (404)
T ss_dssp CSEEEECSCGG
T ss_pred CCEEEEECCHH
T ss_conf 96799806689
No 141
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=46.09 E-value=14 Score=16.13 Aligned_cols=69 Identities=16% Similarity=0.226 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH-HHHHCCCEEEEEECCCCHHH---HHHCCCCCCEECCC
Q ss_conf 57899998986347543333210000123210799999-75300101112101320067---76301244124043
Q gi|255764473|r 57 RTRVSFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTAK-VLSRYVDAIVMRTTNHSRLL---ELTEYATVPVINAL 128 (306)
Q Consensus 57 RTR~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~~-~ls~~~D~iviR~~~~~~~~---~~~~~~~vpvINa~ 128 (306)
.-.-.++.|++++|.++..+....-+. +.-...++ .++..+|+|++=......+. +.+....+|||-..
T Consensus 17 ~~~~G~~~aa~~~g~~l~~~~~~~~d~---~~q~~~i~~~i~~~vDgIii~~~~~~~~~~~~~~a~~~gipvv~~d 89 (313)
T 2h3h_A 17 QVEQGVKAAGKALGVDTKFFVPQKEDI---NAQLQMLESFIAEGVNGIAIAPSDPTAVIPTIKKALEMGIPVVTLD 89 (313)
T ss_dssp HHHHHHHHHHHHHTCEEEEECCSSSCH---HHHHHHHHHHHHTTCSEEEECCSSTTTTHHHHHHHHHTTCCEEEES
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCCCH---HHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEEC
T ss_conf 999999999998099799997999999---9999999999975999999977622112599999996699489944
No 142
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=45.99 E-value=9.8 Score=17.11 Aligned_cols=15 Identities=20% Similarity=0.160 Sum_probs=6.3
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 868775599999999
Q gi|255764473|r 285 FDEAENRLHTQKAIL 299 (306)
Q Consensus 285 ~~Qa~Ngl~vr~AiL 299 (306)
++++-+-+-+-.|+.
T Consensus 398 ~eda~~~~~iieAi~ 412 (433)
T 1h6d_A 398 GEEGMQDVRLIQAIY 412 (433)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
T ss_conf 999999999999999
No 143
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=45.77 E-value=5.3 Score=18.86 Aligned_cols=18 Identities=28% Similarity=0.313 Sum_probs=9.6
Q ss_pred HHHCCHHHHHHHHHHHHH
Q ss_conf 445899999999999999
Q gi|255764473|r 11 LSNISSSNLSCIIEVAKK 28 (306)
Q Consensus 11 ~~dl~~~~i~~ll~~A~~ 28 (306)
+-|.+.+.+....+....
T Consensus 33 l~D~~~~~l~~~~~~i~~ 50 (483)
T 3mog_A 33 LYDISAEALTRAIDGIHA 50 (483)
T ss_dssp EECSCHHHHHHHHHHHHH
T ss_pred EEECCHHHHHHHHHHHHH
T ss_conf 997999999999999999
No 144
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=45.52 E-value=6.4 Score=18.32 Aligned_cols=28 Identities=14% Similarity=0.287 Sum_probs=11.2
Q ss_pred HHHHHHHHC--CCEEEEEECCCCHHHHHHC
Q ss_conf 999975300--1011121013200677630
Q gi|255764473|r 91 DTAKVLSRY--VDAIVMRTTNHSRLLELTE 118 (306)
Q Consensus 91 Dt~~~ls~~--~D~iviR~~~~~~~~~~~~ 118 (306)
+..+-++.+ .|+|+.=..+.-.+.++++
T Consensus 117 ~~f~~l~~~~~~~~IiaSnTS~l~i~~la~ 146 (302)
T 1f0y_A 117 ELFKRLDKFAAEHTIFASNTSSLQITSIAN 146 (302)
T ss_dssp HHHHHHTTTSCTTCEEEECCSSSCHHHHHT
T ss_pred HHHHHHHHCCCCCEEEEECCCCCHHHHHHH
T ss_conf 889999851777716877776310466776
No 145
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, PSI-2, protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=45.37 E-value=8.4 Score=17.55 Aligned_cols=37 Identities=11% Similarity=0.208 Sum_probs=16.3
Q ss_pred CCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 544379879999428883578999989863475433332
Q gi|255764473|r 39 NKPLSGKVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLS 77 (306)
Q Consensus 39 ~~~l~gk~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~ 77 (306)
+-.++++.| +++ =.|-..=...-....+-|.+|.-+.
T Consensus 16 ~~~~~~MkI-lI~-GasG~iG~~lv~~Ll~~g~~V~~l~ 52 (236)
T 3e8x_A 16 NLYFQGMRV-LVV-GANGKVARYLLSELKNKGHEPVAMV 52 (236)
T ss_dssp -----CCEE-EEE-TTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCCCEE-EEE-CCCCHHHHHHHHHHHHCCCEEEEEE
T ss_conf 457799908-999-9988899999999997859899998
No 146
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P)binding protein, rossmann fold; HET: NAP; 2.15A {Streptococcus pyogenes m1 gas} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=45.10 E-value=7.8 Score=17.76 Aligned_cols=32 Identities=16% Similarity=0.169 Sum_probs=15.2
Q ss_pred CCCEEEEEECCCCHHHHHHCC-CCCCEECCCCC
Q ss_conf 010111210132006776301-24412404333
Q gi|255764473|r 99 YVDAIVMRTTNHSRLLELTEY-ATVPVINALTD 130 (306)
Q Consensus 99 ~~D~iviR~~~~~~~~~~~~~-~~vpvINa~~~ 130 (306)
-.|++++=.+++..-.-+.+. ....||+-..|
T Consensus 60 ~~Dvi~LavkP~~~~~vl~~~~~~~~vISi~Ag 92 (259)
T 2ahr_A 60 QVDLVILGIKPQLFETVLKPLHFKQPIISMAAG 92 (259)
T ss_dssp TCSEEEECSCGGGHHHHHTTSCCCSCEEECCTT
T ss_pred HCCCEEECCCCHHHHHHHHHHCCCCEEEEECCC
T ss_conf 476356269971578774341256459994054
No 147
>2rfl_A Putative phosphohistidine phosphatase SIXA; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=45.01 E-value=14 Score=16.03 Aligned_cols=49 Identities=8% Similarity=0.120 Sum_probs=37.8
Q ss_pred HCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCC
Q ss_conf 589999999999999999665236665443798799994288835789999898634754
Q gi|255764473|r 13 NISSSNLSCIIEVAKKIKNSSENIFENKPLSGKVLAMIFEKPSTRTRVSFEVAMKHLGGD 72 (306)
Q Consensus 13 dl~~~~i~~ll~~A~~~k~~~~~~~~~~~l~gk~i~~lF~e~StRTR~SFe~A~~~LG~~ 72 (306)
.|++....+.-..+..++...... -.+|.=|+.|||-..+.-+..+|..
T Consensus 32 pLt~~G~~qa~~~~~~l~~~~~~~-----------d~i~~Sp~~Ra~qTa~~i~~~~~~~ 80 (173)
T 2rfl_A 32 GLNEAGFAEAEIIADLAADRRYRP-----------DLILSSTAARCRQTTQAWQRAFNEG 80 (173)
T ss_dssp CBCHHHHHHHHHHHHHHHHHTCCC-----------SEEEECSSHHHHHHHHHHHHHHC--
T ss_pred CCCHHHHHHHHHHHHHHHHCCCCC-----------CEEEECCCHHHHHHHHHHHHHCCCC
T ss_conf 879999999999999999659997-----------8899563457788768888633568
No 148
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=44.89 E-value=14 Score=16.04 Aligned_cols=39 Identities=15% Similarity=0.235 Sum_probs=16.6
Q ss_pred HHHHHHHHC-CCEEEEE--ECCCCHHHHHHCCCCCC---EECCCC
Q ss_conf 999975300-1011121--01320067763012441---240433
Q gi|255764473|r 91 DTAKVLSRY-VDAIVMR--TTNHSRLLELTEYATVP---VINALT 129 (306)
Q Consensus 91 Dt~~~ls~~-~D~iviR--~~~~~~~~~~~~~~~vp---vINa~~ 129 (306)
+.+.-+..+ .|++++= -|-+-....+.+.+..| ||-.|+
T Consensus 103 ~i~~~i~~~~p~~ivivvtNPvd~~t~~~~k~sg~~~~rvig~gt 147 (317)
T 2ewd_A 103 SVAEGVKKYCPNAFVICITNPLDVMVSHFQKVSGLPHNKVCGMAG 147 (317)
T ss_dssp HHHHHHHHHCTTSEEEECCSSHHHHHHHHHHHHCCCGGGEEESCH
T ss_pred HHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCCEECCCC
T ss_conf 999999964999479992487048999999962999312303654
No 149
>3miz_A Putative transcriptional regulator protein, LACI family; LACL family, protein structure initiative II (PSI II), NYSGXRC, structural genomics; 1.91A {Rhizobium etli}
Probab=44.89 E-value=14 Score=16.02 Aligned_cols=82 Identities=11% Similarity=0.081 Sum_probs=49.0
Q ss_pred CCEEEEEECCCC-----CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH-HHCCCEEEEEECCCCHHHHHH
Q ss_conf 987999942888-----35789999898634754333321000012321079999975-300101112101320067763
Q gi|255764473|r 44 GKVLAMIFEKPS-----TRTRVSFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTAKVL-SRYVDAIVMRTTNHSRLLELT 117 (306)
Q Consensus 44 gk~i~~lF~e~S-----tRTR~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~~~l-s~~~D~iviR~~~~~~~~~~~ 117 (306)
-++|+++....+ ++-...++.++++.|.+++...... ..|...+..+.+ +..+|++++=...........
T Consensus 13 s~~Igliv~~~~~~~f~~~~~~gi~~~a~~~gy~l~~~~~~~----~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~ 88 (301)
T 3miz_A 13 SNTFGIITDYVSTTPYSVDIVRGIQDWANANGKTILIANTGG----SSEREVEIWKMFQSHRIDGVLYVTMYRRIVDPES 88 (301)
T ss_dssp CCEEEEEESSTTTCCSCHHHHHHHHHHHHHTTCEEEEEECTT----CHHHHHHHHHHHHHTTCSEEEEEEEEEEECCCCC
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCC----CHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHH
T ss_conf 998999968876797999999999999997799899997999----9699999999987578768996163100101777
Q ss_pred CCCCCCEECCCC
Q ss_conf 012441240433
Q gi|255764473|r 118 EYATVPVINALT 129 (306)
Q Consensus 118 ~~~~vpvINa~~ 129 (306)
....+|++.-++
T Consensus 89 ~~~~ip~V~~~~ 100 (301)
T 3miz_A 89 GDVSIPTVMINC 100 (301)
T ss_dssp TTCCCCEEEEEE
T ss_pred HHCCCCEEEEEE
T ss_conf 844999899961
No 150
>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A
Probab=44.62 E-value=6.6 Score=18.21 Aligned_cols=83 Identities=19% Similarity=0.209 Sum_probs=47.0
Q ss_pred CCCCCCCCCCC-------CCCCCCCCHHHHHHHHHHCCCEEEEEECC---CCHHHHHHCCCCCCEECCCC---CCCHHHH
Q ss_conf 75433332100-------00123210799999753001011121013---20067763012441240433---3202467
Q gi|255764473|r 70 GGDTIFLSGSE-------MQLGRAETIGDTAKVLSRYVDAIVMRTTN---HSRLLELTEYATVPVINALT---DNTHPCQ 136 (306)
Q Consensus 70 G~~~~~~~~~~-------ss~~kgEsl~Dt~~~ls~~~D~iviR~~~---~~~~~~~~~~~~vpvINa~~---~~~HPtQ 136 (306)
+.+++.++.++ +...+|+...|....++ +|+++--|.- ...+.++.+.++.|++.|-- ...-|
T Consensus 122 ~~n~LlldaGD~~qGs~~s~~~~G~~~v~~mN~lG--~Da~~GNHEFd~G~~~L~~~~~~~~fp~L~aNv~~~~~~~~-- 197 (562)
T 2wdc_A 122 GGKALVLDGGDTWTNSGLSLLTRGEAVVRWQNLVG--VDHMVSHWEWTLGRERVEELLGLFRGEFLSYNIVDDLFGDP-- 197 (562)
T ss_dssp TCCEEEEECSCCSSSSHHHHHHTTHHHHHHHHHHT--CCEECCSGGGGGCHHHHHHHHHHCCSEECCSSCEETTTCCB--
T ss_pred CCCEEEEECCCCCCCCHHHHHHCCHHHHHHHHHCC--CCEEECCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCC--
T ss_conf 99879996797787718888748878999997369--75885362134688889999975699777511100345782--
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEECC
Q ss_conf 8765576642001336773046104
Q gi|255764473|r 137 IIADIMTFEEHRGSVKGKLFSWSGD 161 (306)
Q Consensus 137 aL~D~~Ti~e~~g~l~~~~i~~vGd 161 (306)
+..-|++.+ ..|.||+++|-
T Consensus 198 -~~~py~i~~----~~G~kVgvIG~ 217 (562)
T 2wdc_A 198 -LFPAYRIHR----VGPYALAVVGA 217 (562)
T ss_dssp -SSCSEEEEE----ETTEEEEEEEE
T ss_pred -CCCCEEEEE----ECCEEEEEECC
T ss_conf -677659999----89989998423
No 151
>1vi2_A Shikimate 5-dehydrogenase 2; structural genomics, oxidoreductase; HET: MSE NAD; 2.10A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 PDB: 1npd_A* 1o9b_A*
Probab=44.30 E-value=15 Score=15.96 Aligned_cols=164 Identities=12% Similarity=0.021 Sum_probs=87.0
Q ss_pred CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH-HHCCCEEEEEECCCCHHHHHHC----------CCCCC
Q ss_conf 835789999898634754333321000012321079999975-3001011121013200677630----------12441
Q gi|255764473|r 55 STRTRVSFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTAKVL-SRYVDAIVMRTTNHSRLLELTE----------YATVP 123 (306)
Q Consensus 55 StRTR~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~~~l-s~~~D~iviR~~~~~~~~~~~~----------~~~vp 123 (306)
-.+.-.=+..+.+++|.+..|....-. .+.+++..+.+ +..++++-+=.|--..+..+.. ..+.-
T Consensus 21 hS~SP~ihn~~f~~lgl~~~Y~~~~v~----~~~l~~~i~~l~~~~~~G~nVT~P~K~~v~~~ld~ls~~A~~igAvNTi 96 (300)
T 1vi2_A 21 HSLSPEMQNKALEKAGLPFTYMAFEVD----NDSFPGAIEGLKALKMRGTGVSMPNKQLACEYVDELTPAAKLVGAINTI 96 (300)
T ss_dssp TCSHHHHHHHHHHHTTCSEEEEEEECC----TTTHHHHHHHHHHTTCCEEEECTTSTTGGGGGCSEECHHHHHHTCCSEE
T ss_pred CCCCHHHHHHHHHHCCCCCEEEEEECC----HHHHHHHHHHHHHCCCCEEEECHHHHHHHHCCCCCCCHHHHHHCCCCEE
T ss_conf 242399999999986999588988778----8899999999862799889985742999872347451778763441114
Q ss_pred EECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHCCCCCCE-EEEEECHHCCCCCCCCHHHHHC--
Q ss_conf 2404333202467876557664200133677304610455554310100123312-5765200001321000024320--
Q gi|255764473|r 124 VINALTDNTHPCQIIADIMTFEEHRGSVKGKLFSWSGDGNNILHSLIEGAARFNY-LLNIATPIGSEPRNEYLNWARN-- 200 (306)
Q Consensus 124 vINa~~~~~HPtQaL~D~~Ti~e~~g~l~~~~i~~vGd~~~v~hS~i~~~~~~g~-~v~~~~P~~~~~~~~~~~~~~~-- 200 (306)
+..-+.-..+=|-...=+..+.+....++++++.++|-++ .+++.+.++...|+ ++.++....-.. ......++.
T Consensus 97 ~~~~g~~~g~NTD~~G~~~~l~~~~~~~~~k~vlilGaGG-aa~Ai~~~l~~~g~~~i~I~nRt~~~~-~~~~~~~~~~~ 174 (300)
T 1vi2_A 97 VNDDGYLRGYNTDGTGHIRAIKESGFDIKGKTMVLLGAGG-ASTAIGAQGAIEGLKEIKLFNRRDEFF-DKALAFAQRVN 174 (300)
T ss_dssp EEETTEEEEECHHHHHHHHHHHHTTCCCTTCEEEEECCSH-HHHHHHHHHHHTTCSEEEEEECSSTTH-HHHHHHHHHHH
T ss_pred ECCCCEEEEECCCCHHHHHHHHHCCCCCCCCEEEEECCCC-HHHHHHHHHHHCCCCCEEEEECCHHHH-HHHHHHHHHHH
T ss_conf 5129979865674175777688708986787679954761-258999999972987228985788999-99999999865
Q ss_pred --C-----CCCCCCCCCHHHHCCCCCCCCCC
Q ss_conf --1-----33222136646630687332221
Q gi|255764473|r 201 --Q-----GASVALFHDAVQAVKGAHCVFTD 224 (306)
Q Consensus 201 --~-----g~~i~~~~d~~eal~~aD~V~~~ 224 (306)
. ...+....+..+.+.++|+|+-.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~divIna 205 (300)
T 1vi2_A 175 ENTDCVVTVTDLADQQAFAEALASADILTNG 205 (300)
T ss_dssp HHSSCEEEEEETTCHHHHHHHHHTCSEEEEC
T ss_pred HCCCCCCCCCCCHHHHHHHHHCCCCCEEECC
T ss_conf 3124332234400145566641456433024
No 152
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=43.76 E-value=7.8 Score=17.77 Aligned_cols=94 Identities=12% Similarity=0.021 Sum_probs=42.7
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHCCC--CCCCCCCCCCCCCC----C---CCHHHHHHHHHHCCCEEEEEECCCCHHHH
Q ss_conf 879999428883578999989863475--43333210000123----2---10799999753001011121013200677
Q gi|255764473|r 45 KVLAMIFEKPSTRTRVSFEVAMKHLGG--DTIFLSGSEMQLGR----A---ETIGDTAKVLSRYVDAIVMRTTNHSRLLE 115 (306)
Q Consensus 45 k~i~~lF~e~StRTR~SFe~A~~~LG~--~~~~~~~~~ss~~k----g---Esl~Dt~~~ls~~~D~iviR~~~~~~~~~ 115 (306)
|+|+.+ -.-.-=.|+..+.++-|. ++.-+|....+..+ | |...+.......-.|++++=.|.+.....
T Consensus 34 k~I~II---GlG~mG~siA~~L~~~g~~~~V~g~D~~~~~~~~a~~~g~id~~~~~~~~~~~~~~dlIilavP~~~~~~v 110 (314)
T 3ggo_A 34 QNVLIV---GVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRTFREI 110 (314)
T ss_dssp SEEEEE---SCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECSCGGGHHHH
T ss_pred CEEEEE---EECHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCHHHHHCCCCCEEEECCCHHHHHHH
T ss_conf 779998---20889999999998069998899997999999999986997511489888725688889983550432104
Q ss_pred ---HHCCC--CCCEECCCCCCCHHHHHHHHH
Q ss_conf ---63012--441240433320246787655
Q gi|255764473|r 116 ---LTEYA--TVPVINALTDNTHPCQIIADI 141 (306)
Q Consensus 116 ---~~~~~--~vpvINa~~~~~HPtQaL~D~ 141 (306)
+..+. +.-|+-.++-..-+.+.+...
T Consensus 111 l~~l~~~l~~~~iI~Dv~SvK~~i~~~~~~~ 141 (314)
T 3ggo_A 111 AKKLSYILSEDATVTDQGSVKGKLVYDLENI 141 (314)
T ss_dssp HHHHHHHSCTTCEEEECCSCCTHHHHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 5543111034554456455418999999851
No 153
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative; 2.00A {Streptococcus agalactiae serogroup V}
Probab=43.73 E-value=10 Score=16.93 Aligned_cols=17 Identities=12% Similarity=0.065 Sum_probs=6.1
Q ss_pred HHHHHHHHHHHCCCCCC
Q ss_conf 78999989863475433
Q gi|255764473|r 58 TRVSFEVAMKHLGGDTI 74 (306)
Q Consensus 58 TR~SFe~A~~~LG~~~~ 74 (306)
++...-..+.+.|-+++
T Consensus 79 ~H~~~~~~al~~gk~vl 95 (329)
T 3evn_A 79 DHYKVAKAALLAGKHVL 95 (329)
T ss_dssp GHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHCCCEEE
T ss_conf 55577899998799899
No 154
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogenase; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=43.41 E-value=15 Score=15.87 Aligned_cols=70 Identities=9% Similarity=0.088 Sum_probs=45.3
Q ss_pred CCCCCCCCEEEECC-----CCCCCCCHH----HCCCCCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCC
Q ss_conf 01336773046104-----555543101----001233125765200001321000024320133222136646630687
Q gi|255764473|r 148 RGSVKGKLFSWSGD-----GNNILHSLI----EGAARFNYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGA 218 (306)
Q Consensus 148 ~g~l~~~~i~~vGd-----~~~v~hS~i----~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~a 218 (306)
.+.+++.+|+++|= .+.+.+|-. ..+.+-|+++.+.-|.-.. . ..+.+..++.++++++
T Consensus 348 ~~~~~~~~I~ilGlafK~~t~d~R~Sps~~l~~~L~~~g~~V~iyDP~v~~----------~--~~~~~~~~l~~~~~~a 415 (478)
T 3g79_A 348 GKKMDGSKVAMLGWAFIKDSDDARNTPSEPYRDLCLKAGASVMVHDPYVVN----------Y--PGVEISDNLEEVVRNA 415 (478)
T ss_dssp TCCSTTCEEEEECSSSSTTCSCCTTCTHHHHHHHHHHHTCEEEEECSSCCC----------B--TTBCEESCHHHHHTTC
T ss_pred CCCCCCCEEEEEEECCCCCCCCHHCCCHHHHHHHHHHCCCEEEEECCCCCC----------C--CCCEECCCHHHHHHCC
T ss_conf 787578667898631479997410185999999999688989998996567----------7--8975628999998379
Q ss_pred CCCCC-CCEEEC
Q ss_conf 33222-100000
Q gi|255764473|r 219 HCVFT-DTWISM 229 (306)
Q Consensus 219 D~V~~-~~~~~~ 229 (306)
|+|.. ..|...
T Consensus 416 D~ivi~t~h~~f 427 (478)
T 3g79_A 416 DAIVVLAGHSAY 427 (478)
T ss_dssp SEEEECSCCHHH
T ss_pred CEEEEECCCHHH
T ss_conf 889996698677
No 155
>2zxr_A Single-stranded DNA specific exonuclease RECJ; DNA repair, hydrolase; 2.15A {Thermus thermophilus} PDB: 2zxo_A 2zxp_A 1ir6_A
Probab=43.31 E-value=5.1 Score=18.96 Aligned_cols=12 Identities=0% Similarity=0.050 Sum_probs=3.9
Q ss_pred HHHHHHHHHHHH
Q ss_conf 787655766420
Q gi|255764473|r 136 QIIADIMTFEEH 147 (306)
Q Consensus 136 QaL~D~~Ti~e~ 147 (306)
+...+++.-.+.
T Consensus 438 ~i~~~l~~~L~~ 449 (666)
T 2zxr_A 438 GLLPQVFRELAL 449 (666)
T ss_dssp GGHHHHHHHHGG
T ss_pred CCHHHHHHHHHH
T ss_conf 022999999996
No 156
>1vpt_A VP39; RNA CAP, poly(A) polymerase, methyltransferase; HET: SAM; 1.80A {Vaccinia virus WR} SCOP: c.66.1.25 PDB: 1vp3_A*
Probab=42.99 E-value=12 Score=16.47 Aligned_cols=40 Identities=10% Similarity=0.093 Sum_probs=19.0
Q ss_pred CCCCCCCEEEECC-CCCCCCCHHHCCCCCC--EEEEEECHHCC
Q ss_conf 1336773046104-5555431010012331--25765200001
Q gi|255764473|r 149 GSVKGKLFSWSGD-GNNILHSLIEGAARFN--YLLNIATPIGS 188 (306)
Q Consensus 149 g~l~~~~i~~vGd-~~~v~hS~i~~~~~~g--~~v~~~~P~~~ 188 (306)
|.+++.+|.|+|- ++.-...+.....+++ ....+.-|..+
T Consensus 72 ~~~~~~~VVYiGSAPG~HI~fL~~lf~~l~~~ikWvLiDP~~~ 114 (348)
T 1vpt_A 72 GILDGATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRHH 114 (348)
T ss_dssp TCSTTCEEEEESCSSCHHHHHHHHHHHHTTCCCEEEEEESSCC
T ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCC
T ss_conf 6778758999475897467999997486187628999889876
No 157
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcriptional regulator; 2.35A {Chloroflexus aggregans dsm 9485}
Probab=42.81 E-value=15 Score=15.81 Aligned_cols=80 Identities=13% Similarity=0.079 Sum_probs=49.3
Q ss_pred EEEEEECCCC--------CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH-HHCCCEEEEEECC-CCHHHH
Q ss_conf 7999942888--------35789999898634754333321000012321079999975-3001011121013-200677
Q gi|255764473|r 46 VLAMIFEKPS--------TRTRVSFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTAKVL-SRYVDAIVMRTTN-HSRLLE 115 (306)
Q Consensus 46 ~i~~lF~e~S--------tRTR~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~~~l-s~~~D~iviR~~~-~~~~~~ 115 (306)
.|+.++-+++ .+.-.+.+..+.+.|-.++.+...+. ..+ .+...+.+ +.-+|++++-... +....+
T Consensus 6 ~ig~~~~~~~P~~~~~~~~~~~~~i~~~a~~~gy~~~~~~~~~~-~~~---~~~~~~~l~~~~vDGiIv~~~~~~~~~~~ 81 (287)
T 3bbl_A 6 MIGYSWTQTEPGQVNHILDQFLSSMVREAGAVNYFVLPFPFSED-RSQ---IDIYRDLIRSGNVDGFVLSSINYNDPRVQ 81 (287)
T ss_dssp EEEECCCCCCTTCSCCTHHHHHHHHHHHHHHTTCEEEECCCCSS-TTC---CHHHHHHHHTTCCSEEEECSCCTTCHHHH
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCC-HHH---HHHHHHHHHHCCCCEEEEECCCCCHHHHH
T ss_conf 99999589997531388999999999999977999999968999-899---99999999818987899978989989999
Q ss_pred HHCCCCCCEECCCC
Q ss_conf 63012441240433
Q gi|255764473|r 116 LTEYATVPVINALT 129 (306)
Q Consensus 116 ~~~~~~vpvINa~~ 129 (306)
.....++|||--+.
T Consensus 82 ~l~~~~iPvV~i~~ 95 (287)
T 3bbl_A 82 FLLKQKFPFVAFGR 95 (287)
T ss_dssp HHHHTTCCEEEESC
T ss_pred HHHHCCCCEEEECC
T ss_conf 99967997999887
No 158
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=42.71 E-value=9.1 Score=17.33 Aligned_cols=96 Identities=17% Similarity=0.046 Sum_probs=49.3
Q ss_pred CCCCCCEEEECCCCCCCCCHHHCCCCCCEEEEEECHHCCCCCCCCHHHHHCCC-----CCCCCCCCHHHHCCCCCCCCCC
Q ss_conf 33677304610455554310100123312576520000132100002432013-----3222136646630687332221
Q gi|255764473|r 150 SVKGKLFSWSGDGNNILHSLIEGAARFNYLLNIATPIGSEPRNEYLNWARNQG-----ASVALFHDAVQAVKGAHCVFTD 224 (306)
Q Consensus 150 ~l~~~~i~~vGd~~~v~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g-----~~i~~~~d~~eal~~aD~V~~~ 224 (306)
.+...++.++|-+ ++.-.-+..+.++|..+....... ......+..+ ..........+.++.+|+|++.
T Consensus 165 ~v~pakv~VlGaG-~ag~~A~~~a~~lga~v~~~d~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DivI~~ 238 (377)
T 2vhw_A 165 GVEPADVVVIGAG-TAGYNAARIANGMGATVTVLDINI-----DKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGA 238 (377)
T ss_dssp TBCCCEEEEECCS-HHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEEC
T ss_pred CCCCCEEEEECCC-CCCHHHHHHHHHCCCEEEEECCHH-----HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 8677659996786-201357999975698899824126-----7776678763776422132566554200244289971
Q ss_pred CEEECCCCCHHHHHHCCCCCCCCHHHHHCCCCCCEEE
Q ss_conf 0000002201333100111233688996289872992
Q gi|255764473|r 225 TWISMNQEFKAREEHVFQPFQVNLSLMSMAHPDALFM 261 (306)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~y~i~~~~l~~a~~~~~vm 261 (306)
..+.-. ..+.-++++.++..++..++.
T Consensus 239 ~~i~g~----------~~p~li~~~~v~~mk~gsVIv 265 (377)
T 2vhw_A 239 VLVPGA----------KAPKLVSNSLVAHMKPGAVLV 265 (377)
T ss_dssp CCCTTS----------CCCCCBCHHHHTTSCTTCEEE
T ss_pred CCCCCC----------CCCCCCHHHHHHCCCCCCEEE
T ss_conf 245798----------898347198985278998899
No 159
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=42.53 E-value=15 Score=15.94 Aligned_cols=39 Identities=10% Similarity=0.097 Sum_probs=16.3
Q ss_pred CCCCCCCEEEECC-CCCCCCCHHHCCCCCC--EEEEEECHHC
Q ss_conf 1336773046104-5555431010012331--2576520000
Q gi|255764473|r 149 GSVKGKLFSWSGD-GNNILHSLIEGAARFN--YLLNIATPIG 187 (306)
Q Consensus 149 g~l~~~~i~~vGd-~~~v~hS~i~~~~~~g--~~v~~~~P~~ 187 (306)
|.+++..|.|+|- ++.....+.....+++ .+..+.-|..
T Consensus 57 ~~~~~~~VVYiGsApG~Hi~~L~~~f~~l~~~ikw~LiDP~~ 98 (307)
T 3mag_A 57 GILDGATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRH 98 (307)
T ss_dssp TCSTTCEEEEESCCSCHHHHHHHHHHHHTTCCCEEEEEESSC
T ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCC
T ss_conf 777776799946589854799999728748760699988987
No 160
>2eq5_A 228AA long hypothetical hydantoin racemase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.20A {Pyrococcus horikoshii OT3}
Probab=42.29 E-value=16 Score=15.76 Aligned_cols=41 Identities=27% Similarity=0.338 Sum_probs=32.0
Q ss_pred HHHHHHHHH-HCCCEEEEEECCCCHHHHHHCCCCCCEECCCC
Q ss_conf 799999753-00101112101320067763012441240433
Q gi|255764473|r 89 IGDTAKVLS-RYVDAIVMRTTNHSRLLELTEYATVPVINALT 129 (306)
Q Consensus 89 l~Dt~~~ls-~~~D~iviR~~~~~~~~~~~~~~~vpvINa~~ 129 (306)
+.+.++-+. ..+|++|+=+..+..+..+.+..++|||+.+.
T Consensus 64 l~~~~~~le~~g~DaivIaC~t~~~l~~~r~~~~iPVig~~e 105 (228)
T 2eq5_A 64 IIRLAKEFEREGVDAIIISCAADPAVEKVRKLLSIPVIGAGS 105 (228)
T ss_dssp HHHHHHHHHHTTCSEEEECSTTCTTHHHHHHHCSSCEEEHHH
T ss_pred HHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCEECCHH
T ss_conf 999999998779989999068759999999865998556318
No 161
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=42.25 E-value=13 Score=16.38 Aligned_cols=41 Identities=12% Similarity=0.011 Sum_probs=15.8
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 88835789999898634754333321000012321079999
Q gi|255764473|r 53 KPSTRTRVSFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTA 93 (306)
Q Consensus 53 e~StRTR~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~ 93 (306)
-..+.++..+-.++.+-|-+++---|-..+....+.+.+.+
T Consensus 74 ~tp~~~H~~~~~~al~~gk~v~~EKPl~~~~~e~~~l~~~~ 114 (330)
T 3e9m_A 74 PTYNQGHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIA 114 (330)
T ss_dssp CCCGGGHHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHH
T ss_conf 99707689999999985995764032112256778899999
No 162
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase family, NAD-binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum ms-1}
Probab=42.07 E-value=16 Score=15.74 Aligned_cols=59 Identities=14% Similarity=0.077 Sum_probs=27.3
Q ss_pred EEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHC-CCEEEEEE
Q ss_conf 994288835789999898634754333321000012321079999975300-10111210
Q gi|255764473|r 49 MIFEKPSTRTRVSFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTAKVLSRY-VDAIVMRT 107 (306)
Q Consensus 49 ~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~~~ls~~-~D~iviR~ 107 (306)
.+|--...-++...-.++.+-|-+++---|-..++...+.+.+.++--+.. .-....|.
T Consensus 72 ~V~I~tp~~~H~~~~~~al~~gk~V~~EKPl~~~~~e~~~l~~~~~~~~~~~~v~~~~r~ 131 (315)
T 3c1a_A 72 AVIIATPPATHAEITLAAIASGKAVLVEKPLTLDLAEAEAVAAAAKATGVMVWVEHTQLF 131 (315)
T ss_dssp EEEEESCGGGHHHHHHHHHHTTCEEEEESSSCSCHHHHHHHHHHHHHHCCCEEEECGGGG
T ss_pred EEEECCCHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 899928788879999999961322113898211146788888887641433312532234
No 163
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=42.00 E-value=4.7 Score=19.19 Aligned_cols=29 Identities=7% Similarity=-0.086 Sum_probs=12.0
Q ss_pred HHHHHHHHC--CCEEEEEECCCCHHHHHHCC
Q ss_conf 999975300--10111210132006776301
Q gi|255764473|r 91 DTAKVLSRY--VDAIVMRTTNHSRLLELTEY 119 (306)
Q Consensus 91 Dt~~~ls~~--~D~iviR~~~~~~~~~~~~~ 119 (306)
+..+-++.+ .|+|..=..+.-.+.+++..
T Consensus 104 ~lf~~l~~~~~~~~IlaSnTS~l~is~ia~~ 134 (319)
T 2dpo_A 104 KIFAQLDSIVDDRVVLSSSSSCLLPSKLFTG 134 (319)
T ss_dssp HHHHHHHTTCCSSSEEEECCSSCCHHHHHTT
T ss_pred HHHHHHHHHHCCCCEEEECHHHHHHHHHHHH
T ss_conf 9999888876023412100101007888763
No 164
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=41.59 E-value=8.1 Score=17.63 Aligned_cols=40 Identities=15% Similarity=0.095 Sum_probs=21.9
Q ss_pred CCCEEEEEECCCCHHHHHHCCCCCCEECCCCCCCHHHHHHH
Q ss_conf 01011121013200677630124412404333202467876
Q gi|255764473|r 99 YVDAIVMRTTNHSRLLELTEYATVPVINALTDNTHPCQIIA 139 (306)
Q Consensus 99 ~~D~iviR~~~~~~~~~~~~~~~vpvINa~~~~~HPtQaL~ 139 (306)
|+|.-..+. ....+.+.++...+.+++..+-..-|+..++
T Consensus 95 ~vd~~~~~~-~~~~~~~~a~~~g~~~~~~~G~~pg~~~~~a 134 (450)
T 1ff9_A 95 VVTTSYVSP-AMMELDQAAKDAGITVMNEIGLDPGIDHLYA 134 (450)
T ss_dssp EEESSCCCH-HHHHTHHHHHHTTCEEECSCBBTTBHHHHHH
T ss_pred EEECCCCHH-HHHHHHHHHHHCCEEEEECCCCCCCHHHHHH
T ss_conf 895151067-7998778874158379626777873578999
No 165
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=41.28 E-value=8.1 Score=17.63 Aligned_cols=13 Identities=23% Similarity=0.322 Sum_probs=5.5
Q ss_pred HHHHCCCCCCCCC
Q ss_conf 9863475433332
Q gi|255764473|r 65 AMKHLGGDTIFLS 77 (306)
Q Consensus 65 A~~~LG~~~~~~~ 77 (306)
.....|.+++.-|
T Consensus 52 ~l~~~gv~v~~~D 64 (308)
T 1qyc_A 52 SFKASGANIVHGS 64 (308)
T ss_dssp HHHTTTCEEECCC
T ss_pred HHCCCCCEEEEEE
T ss_conf 6503895899964
No 166
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=41.11 E-value=8.8 Score=17.43 Aligned_cols=19 Identities=21% Similarity=-0.080 Sum_probs=10.5
Q ss_pred HHHHHHHHHCCCCCCCCCC
Q ss_conf 9999898634754333321
Q gi|255764473|r 60 VSFEVAMKHLGGDTIFLSG 78 (306)
Q Consensus 60 ~SFe~A~~~LG~~~~~~~~ 78 (306)
-.|..+..+||.++..++-
T Consensus 47 ~~~~~~f~~lG~~v~~ldl 65 (206)
T 3l4e_A 47 EAGKKALESLGLLVEELDI 65 (206)
T ss_dssp HHHHHHHHHTTCEEEECCT
T ss_pred HHHHHHHHHCCCEEEEEEC
T ss_conf 9999999987997899855
No 167
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1*
Probab=40.28 E-value=17 Score=15.56 Aligned_cols=133 Identities=19% Similarity=0.226 Sum_probs=80.4
Q ss_pred EEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH----HHHH----CCCEEEEEECCCCHH--HHHHC
Q ss_conf 9942888357899998986347543333210000123210799999----7530----010111210132006--77630
Q gi|255764473|r 49 MIFEKPSTRTRVSFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTAK----VLSR----YVDAIVMRTTNHSRL--LELTE 118 (306)
Q Consensus 49 ~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~~----~ls~----~~D~iviR~~~~~~~--~~~~~ 118 (306)
.-|.++..+..++||- +||.-.+|.+ -|.++.++=+ .|+. -.| +|+-.|+.+.. .-+++
T Consensus 225 ~~~~~~~~~~~C~FE~---------iYfsrpdS~~-~g~~Vy~~R~~lG~~La~~~~~~~D-vV~~VPds~~~aa~gya~ 293 (459)
T 1ao0_A 225 ERFSMNINRSICSMEY---------IYFSRPDSNI-DGINVHSARKNLGKMLAQESAVEAD-VVTGVPDSSISAAIGYAE 293 (459)
T ss_dssp EESCSSCCCCEEHHHH---------HTTSCTTCEE-TTEEHHHHHHHHHHHHHHHHCCCCS-EEECCTTTTHHHHHHHHH
T ss_pred EECCCCCCCCCCCEEE---------EEECCCCCCC-CCHHHHHHHHHHHHHHHCCCCCCCC-EEEECCCCHHHHHHHHHH
T ss_conf 3036788766661787---------6403675311-5536999999999977333775782-784257763888999998
Q ss_pred CCCCCEECCCC-----C--CCHHHHHHHHHHHHHH---HCCCCCCCCEEEECCC---CCCCCCHHHCCCCCCEE---EEE
Q ss_conf 12441240433-----3--2024678765576642---0013367730461045---55543101001233125---765
Q gi|255764473|r 119 YATVPVINALT-----D--NTHPCQIIADIMTFEE---HRGSVKGKLFSWSGDG---NNILHSLIEGAARFNYL---LNI 182 (306)
Q Consensus 119 ~~~vpvINa~~-----~--~~HPtQaL~D~~Ti~e---~~g~l~~~~i~~vGd~---~~v~hS~i~~~~~~g~~---v~~ 182 (306)
.+.+|.--+.- + ---|+|..-+..-=.+ ....++|++|.+|-|. +++....+..+.+.|++ +.+
T Consensus 294 ~~gip~~~~likn~y~~RtFI~p~~~~r~~~v~~k~~~~~~~i~gk~vvlvDDSIVRGtT~k~iv~~lr~~Gakevh~~~ 373 (459)
T 1ao0_A 294 ATGIPYELGLIKNRYVGRTFIQPSQALREQGVRMKLSAVRGVVEGKRVVMVDDSIVRGTTSRRIVTMLREAGATEVHVKI 373 (459)
T ss_dssp HHCCCBCCCEEECTTCCTTSCCCCHHHHHHTCCSSEEECHHHHTTCEEEEEESCCSSSHHHHHHHHHHHHTTCSEEEEEE
T ss_pred HHCCCHHHCEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECCCHHHHHHHHHHHCCCCEEEEEE
T ss_conf 70997133424212014322697388999988766554487744670699953210130289999999747998899997
Q ss_pred ECHHCCCCCC
Q ss_conf 2000013210
Q gi|255764473|r 183 ATPIGSEPRN 192 (306)
Q Consensus 183 ~~P~~~~~~~ 192 (306)
++|+-..|..
T Consensus 374 ~sPpi~~pc~ 383 (459)
T 1ao0_A 374 SSPPIAHPCF 383 (459)
T ss_dssp SSCCCCSCCC
T ss_pred CCCCCCCCCC
T ss_conf 8897367655
No 168
>3l6u_A ABC-type sugar transport system periplasmic component; structural genomics, nysgrc, target 11006S, PSI-2, protein structure initiative; 1.90A {Exiguobacterium sibiricum}
Probab=39.82 E-value=17 Score=15.51 Aligned_cols=83 Identities=17% Similarity=0.230 Sum_probs=49.3
Q ss_pred CCEEEEEECCCC----CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCHH---HHH
Q ss_conf 987999942888----3578999989863475433332100001232107999997530010111210132006---776
Q gi|255764473|r 44 GKVLAMIFEKPS----TRTRVSFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTAKVLSRYVDAIVMRTTNHSRL---LEL 116 (306)
Q Consensus 44 gk~i~~lF~e~S----tRTR~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~~~ls~~~D~iviR~~~~~~~---~~~ 116 (306)
.++|+.++...+ .+.--.++.++.+.|-.++.++.....-..-|.++. .++..+|+|++-..+.... .+.
T Consensus 8 ~~~Igvi~~~~~~~f~~~~~~~i~~~a~~~Gy~~~~~~~~~~~~~~~~~i~~---li~~~~DgIii~~~~~~~~~~~l~~ 84 (293)
T 3l6u_A 8 RNIVGFTIVNDKHEFAQRLINAFKAEAKANKYEALVATSQNSRISEREQILE---FVHLKVDAIFITTLDDVYIGSAIEE 84 (293)
T ss_dssp -CEEEEEESCSCSHHHHHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHH---HHHTTCSEEEEECSCTTTTHHHHHH
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHH---HHHCCCCEEEEECCCCCCHHHHHHH
T ss_conf 9999999968999899999999999999869989999799998999999999---9976999999943322013899999
Q ss_pred HCCCCCCEECCCC
Q ss_conf 3012441240433
Q gi|255764473|r 117 TEYATVPVINALT 129 (306)
Q Consensus 117 ~~~~~vpvINa~~ 129 (306)
+....+|||.-.+
T Consensus 85 ~~~~giPVV~~~~ 97 (293)
T 3l6u_A 85 AKKAGIPVFAIDR 97 (293)
T ss_dssp HHHTTCCEEEESS
T ss_pred HHHCCCCEEECCC
T ss_conf 9986997997177
No 169
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3itd_A
Probab=39.42 E-value=6.5 Score=18.29 Aligned_cols=82 Identities=18% Similarity=0.267 Sum_probs=36.4
Q ss_pred CCCCCCEEEEEECCCCCHHHHHHHH--HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHC-CCEEEEEEC--CCCHHH
Q ss_conf 4437987999942888357899998--98634754333321000012321079999975300-101112101--320067
Q gi|255764473|r 40 KPLSGKVLAMIFEKPSTRTRVSFEV--AMKHLGGDTIFLSGSEMQLGRAETIGDTAKVLSRY-VDAIVMRTT--NHSRLL 114 (306)
Q Consensus 40 ~~l~gk~i~~lF~e~StRTR~SFe~--A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~~~ls~~-~D~iviR~~--~~~~~~ 114 (306)
..|+||++ ++ --.+| -+-.++ ...+.|++|+..+..+ .|.++.+.+-+..+ .+++.+... +...+.
T Consensus 14 grL~gK~a-lI--TGas~-GIG~aia~~la~~Ga~V~i~~~~~-----~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~ 84 (270)
T 3is3_A 14 GRLDGKVA-LV--TGSGR-GIGAAVAVHLGRLGAKVVVNYANS-----TKDAEKVVSEIKALGSDAIAIKADIRQVPEIV 84 (270)
T ss_dssp TCCTTCEE-EE--SCTTS-HHHHHHHHHHHHTTCEEEEEESSC-----HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHH
T ss_pred CCCCCCEE-EE--ECCCC-HHHHHHHHHHHHCCCEEEEEECCC-----HHHHHHHHHHHHHHCCCEEEEECCCCCHHHHH
T ss_conf 85498889-99--28985-899999999998799899983897-----67999999999960997899984799999999
Q ss_pred HHH-----C--CCCCCEECCCCC
Q ss_conf 763-----0--124412404333
Q gi|255764473|r 115 ELT-----E--YATVPVINALTD 130 (306)
Q Consensus 115 ~~~-----~--~~~vpvINa~~~ 130 (306)
.+. + ..++-|-|||..
T Consensus 85 ~~~~~~~~~~G~iDilVnnAG~~ 107 (270)
T 3is3_A 85 KLFDQAVAHFGHLDIAVSNSGVV 107 (270)
T ss_dssp HHHHHHHHHHSCCCEEECCCCCC
T ss_pred HHHHHHHHHCCCCCEEEECCCCC
T ss_conf 99999999739998999899889
No 170
>3d3q_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2; 2.70A {Staphylococcus epidermidis atcc 12228}
Probab=39.25 E-value=8.8 Score=17.41 Aligned_cols=90 Identities=21% Similarity=0.245 Sum_probs=50.4
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCH-------HHHHHHHHHCCCEEEEEE------C---
Q ss_conf 879999428883578999989863475433332100001232107-------999997530010111210------1---
Q gi|255764473|r 45 KVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSGSEMQLGRAETI-------GDTAKVLSRYVDAIVMRT------T--- 108 (306)
Q Consensus 45 k~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl-------~Dt~~~ls~~~D~iviR~------~--- 108 (306)
+.|+.+=--.|--|.+|+++| ++++|.+|..| ++|+.||=.+ +|...+=-.++|++-.-. +
T Consensus 8 ~li~i~GpTasGKT~la~~LA-~~l~~eIIsaD--S~QvYkgl~IgTaKps~~e~~~ipHhlid~~~p~e~~sv~~f~~~ 84 (340)
T 3d3q_A 8 FLIVIVGPTASGKTELSIEVA-KKFNGEIISGD--SMQVYQGMDIGTAKVTTEEMEGIPHYMIDILPPDASFSAYEFKKR 84 (340)
T ss_dssp EEEEEECSTTSSHHHHHHHHH-HHTTEEEEECC--SSTTBTTCCTTTTCCCTTTTTTCCEESSSCBCTTSCCCHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHH-HHCCCEEEECC--HHHHCCCCCEEECCCCHHHHHCCCEEEEEEECCCCCCCHHHHHHH
T ss_conf 569998977135899999999-98799899402--386549998676999999992799766613778777039887779
Q ss_pred CCCHHHHHHCCCCCCEECCCCCCCHHHHHHH
Q ss_conf 3200677630124412404333202467876
Q gi|255764473|r 109 NHSRLLELTEYATVPVINALTDNTHPCQIIA 139 (306)
Q Consensus 109 ~~~~~~~~~~~~~vpvINa~~~~~HPtQaL~ 139 (306)
-...+.++.+...+||+=||||-+ -|+|+
T Consensus 85 a~~~i~~i~~~~kiPIlVGGTglY--i~all 113 (340)
T 3d3q_A 85 AEKYIKDITRRGKVPIIAGGTGLY--IQSLL 113 (340)
T ss_dssp HHHHHHHHHHTTCEEEEECCCHHH--HHHHH
T ss_pred HHHHHHHHHHCCCCEEEECCCHHH--HHHHH
T ss_conf 999999999759971998170889--99998
No 171
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=39.03 E-value=10 Score=17.04 Aligned_cols=88 Identities=18% Similarity=0.202 Sum_probs=40.0
Q ss_pred CCCCCCCCCCCCCCCCCCC-----------HHHHHHHHHHC-CCEEEEE--ECCCCHHHHHHCCCCC---CEECCCCC--
Q ss_conf 7543333210000123210-----------79999975300-1011121--0132006776301244---12404333--
Q gi|255764473|r 70 GGDTIFLSGSEMQLGRAET-----------IGDTAKVLSRY-VDAIVMR--TTNHSRLLELTEYATV---PVINALTD-- 130 (306)
Q Consensus 70 G~~~~~~~~~~ss~~kgEs-----------l~Dt~~~ls~~-~D~iviR--~~~~~~~~~~~~~~~v---pvINa~~~-- 130 (306)
|++++.+.++.. ...|++ +++.+..+..+ .+++++= .|-+.....+.+.+.. -||-+|+-
T Consensus 67 ~adivvitag~~-~kpg~~R~dll~~Na~I~~~i~~~i~~~~p~~~vlvvsNPvd~~~~~~~k~sg~~~~~vig~gt~LD 145 (319)
T 1a5z_A 67 GSDVVIVAAGVP-QKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVDVLTYFFLKESGMDPRKVFGSGTVLD 145 (319)
T ss_dssp TCSEEEECCCCC-CCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHHHHHHTCCTTTEEECTTHHH
T ss_pred CCCEEEECCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCHHHEEEECCHHH
T ss_conf 999999868998-9999987898762267888899999842998389993486256899999974998345884033188
Q ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCC
Q ss_conf 202467876557664200133677304610455
Q gi|255764473|r 131 NTHPCQIIADIMTFEEHRGSVKGKLFSWSGDGN 163 (306)
Q Consensus 131 ~~HPtQaL~D~~Ti~e~~g~l~~~~i~~vGd~~ 163 (306)
+.--...|++.+-+. -+..+..++|.|+
T Consensus 146 s~R~~~~la~~l~v~-----~~~V~~~ViG~Hg 173 (319)
T 1a5z_A 146 TARLRTLIAQHCGFS-----PRSVHVYVIGEHG 173 (319)
T ss_dssp HHHHHHHHHHHHTCC-----GGGEECCEEBCSS
T ss_pred HHHHHHHHHHHHCCC-----CCEEEEEECCCCC
T ss_conf 999999999983999-----6504511126788
No 172
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=38.77 E-value=7.9 Score=17.71 Aligned_cols=10 Identities=20% Similarity=0.371 Sum_probs=4.4
Q ss_pred CCCCCCCCCC
Q ss_conf 7543333210
Q gi|255764473|r 70 GGDTIFLSGS 79 (306)
Q Consensus 70 G~~~~~~~~~ 79 (306)
|++++.+.++
T Consensus 74 ~advvvitag 83 (318)
T 1y6j_A 74 DCDVIVVTAG 83 (318)
T ss_dssp TCSEEEECCC
T ss_pred CCCEEEECCC
T ss_conf 8888997289
No 173
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=38.57 E-value=13 Score=16.27 Aligned_cols=30 Identities=13% Similarity=0.194 Sum_probs=11.1
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 989863475433332100001232107999
Q gi|255764473|r 63 EVAMKHLGGDTIFLSGSEMQLGRAETIGDT 92 (306)
Q Consensus 63 e~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt 92 (306)
-.++.+-|-||+---|-..++...+.+.+.
T Consensus 88 ~~~al~aGkhVl~EKPla~~~~ea~~l~~~ 117 (362)
T 1ydw_A 88 AIKAAEKGKHILLEKPVAMNVTEFDKIVDA 117 (362)
T ss_dssp HHHHHTTTCEEEECSSCSSSHHHHHHHHHH
T ss_pred HHHHHHCCCEEEEECCCCCHHHHHHHHHHH
T ss_conf 999997698599947810004678999999
No 174
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosynthesis; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=38.31 E-value=6.1 Score=18.47 Aligned_cols=32 Identities=16% Similarity=0.127 Sum_probs=17.4
Q ss_pred CCCEEEEEECCCC---HHHHHHCCC--CCCEECCCCC
Q ss_conf 0101112101320---067763012--4412404333
Q gi|255764473|r 99 YVDAIVMRTTNHS---RLLELTEYA--TVPVINALTD 130 (306)
Q Consensus 99 ~~D~iviR~~~~~---~~~~~~~~~--~vpvINa~~~ 130 (306)
..|++++=.+++. .+.++..+. +..||+-..|
T Consensus 84 ~aDvI~LaVkP~~~~~vl~~i~~~l~~~~lVISvaAG 120 (322)
T 2izz_A 84 HSDVLFLAVKPHIIPFILDEIGADIEDRHIVVSCAAG 120 (322)
T ss_dssp HCSEEEECSCGGGHHHHHHHHGGGCCTTCEEEECCTT
T ss_pred CCCEEEEHHHHHHHHHHHHHHHHCCCCCEEEEECCCC
T ss_conf 2997885337887604545431002565067744678
No 175
>3afn_B A1-R, 4-deoxy-L-erythro-5-hexoseulose-uronic acid reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=38.31 E-value=8.9 Score=17.36 Aligned_cols=18 Identities=17% Similarity=0.178 Sum_probs=10.8
Q ss_pred HHHCCCCCCEEEEEECHH
Q ss_conf 010012331257652000
Q gi|255764473|r 169 LIEGAARFNYLLNIATPI 186 (306)
Q Consensus 169 ~i~~~~~~g~~v~~~~P~ 186 (306)
+...+...|..++.++|-
T Consensus 178 lA~e~~~~gIrVN~I~PG 195 (258)
T 3afn_B 178 WVDFHTKDGVRFNIVSPG 195 (258)
T ss_dssp HHHHHGGGTEEEEEEEEC
T ss_pred HHHHHCCCCEEEEEEECC
T ss_conf 999855258499999628
No 176
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=37.54 E-value=19 Score=15.28 Aligned_cols=47 Identities=4% Similarity=-0.099 Sum_probs=25.3
Q ss_pred EEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 99428883578999989863475433332100001232107999997
Q gi|255764473|r 49 MIFEKPSTRTRVSFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTAKV 95 (306)
Q Consensus 49 ~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~~~ 95 (306)
.+|--..+.++...-.++.+-|-+++---|-..++...+.+.+.++-
T Consensus 70 ~V~i~tp~~~H~~~~~~al~~gk~Vl~EKP~a~~~~ea~~l~~~~~~ 116 (337)
T 3ip3_A 70 ILVINTVFSLNGKILLEALERKIHAFVEKPIATTFEDLEKIRSVYQK 116 (337)
T ss_dssp EEEECSSHHHHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHC
T ss_conf 89995886167999999998799699947854440122234554320
No 177
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2jfg_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=36.75 E-value=12 Score=16.59 Aligned_cols=21 Identities=14% Similarity=-0.056 Sum_probs=8.8
Q ss_pred HHHHHHHHHHHHCCCCCCCCC
Q ss_conf 578999989863475433332
Q gi|255764473|r 57 RTRVSFEVAMKHLGGDTIFLS 77 (306)
Q Consensus 57 RTR~SFe~A~~~LG~~~~~~~ 77 (306)
+|=+|......+.|..|...|
T Consensus 15 ~sG~s~a~~l~~~G~~v~~~D 35 (439)
T 2x5o_A 15 LTGLSCVDFFLARGVTPRVMD 35 (439)
T ss_dssp HHHHHHHHHHHTTTCCCEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEE
T ss_conf 999999999997879499997
No 178
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genomics, protein structure initiative, PSI; HET: NAD; 1.95A {Listeria innocua}
Probab=36.65 E-value=15 Score=15.80 Aligned_cols=44 Identities=14% Similarity=0.109 Sum_probs=18.9
Q ss_pred ECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 42888357899998986347543333210000123210799999
Q gi|255764473|r 51 FEKPSTRTRVSFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTAK 94 (306)
Q Consensus 51 F~e~StRTR~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~~ 94 (306)
+--..+-++.....++.+-|-+++---|-..+....+.+.+.++
T Consensus 70 ~i~tp~~~h~~~~~~al~~gkhv~~EKP~a~~~~e~~~l~~~~~ 113 (359)
T 3e18_A 70 LIATPNDSHKELAISALEAGKHVVCEKPVTMTSEDLLAIMDVAK 113 (359)
T ss_dssp EECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHH
T ss_pred EECCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 98788055235678888539819995786420878878899997
No 179
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=36.30 E-value=4.8 Score=19.15 Aligned_cols=68 Identities=15% Similarity=0.167 Sum_probs=36.5
Q ss_pred CCCCCCCEEEECCCCCCCCCHHHCCCCCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCC-----CCHHH-HCCCCCCCC
Q ss_conf 133677304610455554310100123312576520000132100002432013322213-----66466-306873322
Q gi|255764473|r 149 GSVKGKLFSWSGDGNNILHSLIEGAARFNYLLNIATPIGSEPRNEYLNWARNQGASVALF-----HDAVQ-AVKGAHCVF 222 (306)
Q Consensus 149 g~l~~~~i~~vGd~~~v~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~-----~d~~e-al~~aD~V~ 222 (306)
|+.+++++.+||- +++..+.+..+...|.++.++-.. ++..+.++..|..+.+- ..+.+ .++++|.|+
T Consensus 2 ~~~~~~~~iIiG~-G~~G~~la~~L~~~g~~vvviD~d-----~~~~~~~~~~g~~~v~gD~td~~~L~~a~i~~a~~vi 75 (144)
T 2hmt_A 2 GRIKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDIN-----EEKVNAYASYATHAVIANATEENELLSLGIRNFEYVI 75 (144)
T ss_dssp ----CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESC-----HHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEE
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHCCCEEEEECCCCHHHHHHCCCCCCCEEE
T ss_conf 8765783999887-899999999999889919999796-----7999999853974999317888888630223499999
No 180
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, cytoplasm, oxidoreductase, phospholipid biosynthesis, structural genomics; HET: EPE; 2.10A {Coxiella burnetii rsa 493}
Probab=35.69 E-value=15 Score=15.83 Aligned_cols=43 Identities=5% Similarity=0.109 Sum_probs=23.7
Q ss_pred CCCEEEEEECCCCH---HHHHHCCC--CCCEECCCCCCCHHHHHHHHH
Q ss_conf 01011121013200---67763012--441240433320246787655
Q gi|255764473|r 99 YVDAIVMRTTNHSR---LLELTEYA--TVPVINALTDNTHPCQIIADI 141 (306)
Q Consensus 99 ~~D~iviR~~~~~~---~~~~~~~~--~vpvINa~~~~~HPtQaL~D~ 141 (306)
..|.+++=.|++.. +.++.++. ..+++....+..+++.-+.+.
T Consensus 99 ~ad~Iiiavps~~~~~~l~~i~~~~~~~~~ii~~~kG~~~~~~~~~~~ 146 (356)
T 3k96_A 99 GVTDILIVVPSFAFHEVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEV 146 (356)
T ss_dssp TCCEEEECCCHHHHHHHHHHHGGGCCTTCEEEECCCSCBTTTBCHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCHH
T ss_conf 786389955619999999973231355530111012346777651014
No 181
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=35.62 E-value=17 Score=15.54 Aligned_cols=62 Identities=11% Similarity=0.024 Sum_probs=29.7
Q ss_pred CCCCCCEEEECCCCCCCCCHHHCCC-CCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHH
Q ss_conf 3367730461045555431010012-33125765200001321000024320133222136646
Q gi|255764473|r 150 SVKGKLFSWSGDGNNILHSLIEGAA-RFNYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAV 212 (306)
Q Consensus 150 ~l~~~~i~~vGd~~~v~hS~i~~~~-~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~ 212 (306)
.+.|++++++||... +.++...+. -+|+.+..++...-...+......+..+..+.+..|..
T Consensus 300 ~l~gkrv~I~gd~~~-a~~l~~~L~~elG~~vv~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~ 362 (511)
T 2xdq_B 300 NLTGKKAVVFGDNTH-AAAMTKILSREMGIHVVWAGTYCKYDADWFRAEVAGFCDEVLITDDHT 362 (511)
T ss_dssp TTTTCEEEEEECHHH-HHHHHHHHHHHHCCEEEEEEESCGGGHHHHHHHHTTTSSEEEECCCHH
T ss_pred HHCCCEEEEECCHHH-HHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEECCHH
T ss_conf 636965999788189-999999999827987999945788758999998505798499955779
No 182
>3fr7_A Putative ketol-acid reductoisomerase (OS05G0573700 protein); rossmann fold, NADPH, knotted protein; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=35.61 E-value=13 Score=16.21 Aligned_cols=49 Identities=14% Similarity=0.135 Sum_probs=19.1
Q ss_pred HHHHHHHHHHCCC-C-CCCCCCCCCCCCCCCCHHHHHHHHHHCCCE-EEEEE
Q ss_conf 8999989863475-4-333321000012321079999975300101-11210
Q gi|255764473|r 59 RVSFEVAMKHLGG-D-TIFLSGSEMQLGRAETIGDTAKVLSRYVDA-IVMRT 107 (306)
Q Consensus 59 R~SFe~A~~~LG~-~-~~~~~~~~ss~~kgEsl~Dt~~~ls~~~D~-iviR~ 107 (306)
|--|+.-..-+-| + +..++.++-..+.+--++|...--...+++ +.+|-
T Consensus 41 r~~f~~l~~~~kg~K~IaVIGyGsQG~aqAlNLRDSg~e~~sG~~V~vGlR~ 92 (525)
T 3fr7_A 41 RNLFPLLPEAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRK 92 (525)
T ss_dssp GGGGGGHHHHTTTCSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECT
T ss_pred CCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCEEEEEECC
T ss_conf 0021230788658987999686747689886485767666788449999589
No 183
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=35.34 E-value=13 Score=16.24 Aligned_cols=89 Identities=15% Similarity=0.063 Sum_probs=35.9
Q ss_pred CCCCCCCCCCCCCCCCCCCHHH-----------HHHHHHHC-CCEEEEE--ECCCCHHHHHHCCCCCC---EECCCCC--
Q ss_conf 7543333210000123210799-----------99975300-1011121--01320067763012441---2404333--
Q gi|255764473|r 70 GGDTIFLSGSEMQLGRAETIGD-----------TAKVLSRY-VDAIVMR--TTNHSRLLELTEYATVP---VINALTD-- 130 (306)
Q Consensus 70 G~~~~~~~~~~ss~~kgEsl~D-----------t~~~ls~~-~D~iviR--~~~~~~~~~~~~~~~vp---vINa~~~-- 130 (306)
|++++.+.++.. ...|++-.| .+..+..+ .+++++= .|-+-..+.+.+.+..| ||-.|+-
T Consensus 70 ~aDivvitag~~-rk~g~~r~dll~~Na~I~~~~~~~i~~~~p~~~vivvsNPvd~~~~~~~~~sg~~~~rvig~gt~LD 148 (303)
T 1o6z_A 70 GSDVVVITAGIP-RQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPVDLLNRHLYEAGDRSREQVIGFGGRLD 148 (303)
T ss_dssp TCSEEEECCCCC-CCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSSHHHHHHHHHHHSSSCGGGEEECCHHHH
T ss_pred CCCEEEEECCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCHHHCCCCCCHHH
T ss_conf 898999936778-8999976788776567899999986215885499994583179999999864998033005761799
Q ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCC
Q ss_conf 2024678765576642001336773046104555
Q gi|255764473|r 131 NTHPCQIIADIMTFEEHRGSVKGKLFSWSGDGNN 164 (306)
Q Consensus 131 ~~HPtQaL~D~~Ti~e~~g~l~~~~i~~vGd~~~ 164 (306)
..-=.+.+++.+.+ .-+.....++|.|+.
T Consensus 149 s~R~~~~ia~~l~v-----~~~~V~~~ViG~Hg~ 177 (303)
T 1o6z_A 149 SARFRYVLSEEFDA-----PVQNVEGTILGEHGD 177 (303)
T ss_dssp HHHHHHHHHHHHTC-----CGGGEECCEEECSST
T ss_pred HHHHHHHHHHHCCC-----CCCCEEEEEECCCCC
T ss_conf 99999777987099-----814237788457898
No 184
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=35.09 E-value=20 Score=15.03 Aligned_cols=170 Identities=10% Similarity=0.085 Sum_probs=90.7
Q ss_pred EEECCCC--CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHH-HCCCEEEEEECCCCHHHHHH--------
Q ss_conf 9942888--357899998986347543333210000123210799999753-00101112101320067763--------
Q gi|255764473|r 49 MIFEKPS--TRTRVSFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTAKVLS-RYVDAIVMRTTNHSRLLELT-------- 117 (306)
Q Consensus 49 ~lF~e~S--tRTR~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~~~ls-~~~D~iviR~~~~~~~~~~~-------- 117 (306)
-++=.|= .++-.=+..+.+.+|.+..|....- ..|.+++....+. ..+.++.+=.|--..+..+.
T Consensus 16 gviG~pI~hS~SP~ihn~~f~~~gl~~~Y~~~~v----~~~~l~~~~~~l~~~~~~G~nVT~P~K~~~~~~~d~l~~~A~ 91 (275)
T 2hk9_A 16 GVIGFPVKHSLSPVFQNALIRYAGLNAVYLAFEI----NPEELKKAFEGFKALKVKGINVTVPFKEEIIPLLDYVEDTAK 91 (275)
T ss_dssp EEEESSCTTCSHHHHHHHHHHHHTCSEEEEEEEC----CGGGHHHHHHHHHHHTCCEEEECTTSTTTTGGGCSEECHHHH
T ss_pred EEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEEC----CHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCCHHHH
T ss_conf 9989976303179999999998699928999877----889999999987507988699757061768654155406667
Q ss_pred --CCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHCCCCCCEEEEEECHHCCCCCCCCH
Q ss_conf --012441240433320246787655766420013367730461045555431010012331257652000013210000
Q gi|255764473|r 118 --EYATVPVINALTDNTHPCQIIADIMTFEEHRGSVKGKLFSWSGDGNNILHSLIEGAARFNYLLNIATPIGSEPRNEYL 195 (306)
Q Consensus 118 --~~~~vpvINa~~~~~HPtQaL~D~~Ti~e~~g~l~~~~i~~vGd~~~v~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~ 195 (306)
...+.-+...+.=..+-|-...=+..+++...+++++++.++|-++ ++++.+.++...|.++.++.... +...
T Consensus 92 ~iGAvNTi~~~~g~l~G~NTD~~G~~~~l~~~~~~~~~~~vlilGaGG-aarai~~aL~~~g~~i~~~~r~~----~~~~ 166 (275)
T 2hk9_A 92 EIGAVNTVKFENGKAYGYNTDWIGFLKSLKSLIPEVKEKSILVLGAGG-ASRAVIYALVKEGAKVFLWNRTK----EKAI 166 (275)
T ss_dssp HHTCCCEEEEETTEEEEECCHHHHHHHHHHHHCTTGGGSEEEEECCSH-HHHHHHHHHHHHTCEEEEECSSH----HHHH
T ss_pred HHCCCCEEEECCCCEEEECCCHHHHHHHHHHCCCCCCCCEEEEECCHH-HHHHHHHHHHHCCCEEEEECCCH----HHHH
T ss_conf 625400389439916424575464430222027676777478845507-78999999997599798533758----9999
Q ss_pred HHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEEC
Q ss_conf 2432013322213664663068733222100000
Q gi|255764473|r 196 NWARNQGASVALFHDAVQAVKGAHCVFTDTWISM 229 (306)
Q Consensus 196 ~~~~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~ 229 (306)
..++.. .........+.+.++|+|+-..=..|
T Consensus 167 ~~~~~~--~~~~~~~~~~~~~~~dliINaTp~Gm 198 (275)
T 2hk9_A 167 KLAQKF--PLEVVNSPEEVIDKVQVIVNTTSVGL 198 (275)
T ss_dssp HHTTTS--CEEECSCGGGTGGGCSEEEECSSTTS
T ss_pred HHHHHC--CCCHHHHHHHHCCCCCEEEECCCCCC
T ss_conf 999866--84111234431141126640356777
No 185
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=34.83 E-value=13 Score=16.33 Aligned_cols=31 Identities=13% Similarity=0.096 Sum_probs=11.8
Q ss_pred EEECCCCCCCCCHHHCCCCCCEEEEEECHHC
Q ss_conf 4610455554310100123312576520000
Q gi|255764473|r 157 SWSGDGNNILHSLIEGAARFNYLLNIATPIG 187 (306)
Q Consensus 157 ~~vGd~~~v~hS~i~~~~~~g~~v~~~~P~~ 187 (306)
.++|....+....-..+..++-.+..+++.+
T Consensus 139 i~~gg~~~~~~~~~~~l~~~~~~~~~~G~~G 169 (299)
T 1vpd_A 139 VMVGGDKAIFDKYYDLMKAMAGSVVHTGDIG 169 (299)
T ss_dssp EEEESCHHHHHHHHHHHHTTEEEEEEEESTT
T ss_pred EEEECCHHHHHHHHHHHHHHCCCCEECCCCC
T ss_conf 9993758888999999999728856539955
No 186
>1m1n_A Nitrogenase molybdenum-iron protein alpha chain; atomic resolution, FEMO cofactor, nitrogen fixation, central nitrogen ligand; HET: HCA CLF CFN; 1.16A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 1g20_A* 1g21_A* 3k1a_A* 1fp4_A* 1qgu_A* 1qh1_A* 1qh8_A* 1h1l_A*
Probab=34.17 E-value=21 Score=14.94 Aligned_cols=45 Identities=7% Similarity=0.069 Sum_probs=19.0
Q ss_pred CCCCCHHHHHHHH-HHCC--CEEEEEE-CC--------CCHHHHHHCCCCCCEECCC
Q ss_conf 2321079999975-3001--0111210-13--------2006776301244124043
Q gi|255764473|r 84 GRAETIGDTAKVL-SRYV--DAIVMRT-TN--------HSRLLELTEYATVPVINAL 128 (306)
Q Consensus 84 ~kgEsl~Dt~~~l-s~~~--D~iviR~-~~--------~~~~~~~~~~~~vpvINa~ 128 (306)
+..|-|+++++-+ ..|- .+|.+-. .. +....++.+...+|||-.-
T Consensus 125 GG~~kL~~aI~e~~~~~~~p~~I~V~sTC~~~lIGDDi~av~~~~~~~~g~pVi~v~ 181 (491)
T 1m1n_A 125 GGDKKLAKLIDEVETLFPLNKGISVQSECPIGLIGDDIESVSKVKGAELSKTIVPVR 181 (491)
T ss_dssp CSHHHHHHHHHHHHHHCTTCCCEEEEECTHHHHHTCCHHHHHHHHHHHHTCCEEEEC
T ss_pred CHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHCCCHHHHHHHHHHHHCCEEEEEE
T ss_conf 809999999999998479998899977877988537999999998887398389997
No 187
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; NP_070841.1, 3-hydroxyacyl-COA dehydrogenase (HBD-9), structural genomics; HET: PE8; 2.00A {Archaeoglobus fulgidus dsm 4304}
Probab=33.78 E-value=9.3 Score=17.26 Aligned_cols=21 Identities=19% Similarity=0.237 Sum_probs=7.1
Q ss_pred HCCCEEEEEECCCCHHHHHHC
Q ss_conf 001011121013200677630
Q gi|255764473|r 98 RYVDAIVMRTTNHSRLLELTE 118 (306)
Q Consensus 98 ~~~D~iviR~~~~~~~~~~~~ 118 (306)
...++++.=..+.-.+.++++
T Consensus 97 ~~~~~ilaSNTSsl~i~~la~ 117 (293)
T 1zej_A 97 RLTNAPLCSNTSVISVDDIAE 117 (293)
T ss_dssp TTCCSCEEECCSSSCHHHHHT
T ss_pred HCCCCCCCCCCCCCCHHHHHH
T ss_conf 423785004543013799987
No 188
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus VF5} SCOP: a.100.1.12 c.2.1.6
Probab=33.76 E-value=13 Score=16.32 Aligned_cols=42 Identities=7% Similarity=0.001 Sum_probs=22.3
Q ss_pred CCCEEEEEECCCCH---HHHHHCCC--CCCEECCCCCCCHHHHHHHH
Q ss_conf 01011121013200---67763012--44124043332024678765
Q gi|255764473|r 99 YVDAIVMRTTNHSR---LLELTEYA--TVPVINALTDNTHPCQIIAD 140 (306)
Q Consensus 99 ~~D~iviR~~~~~~---~~~~~~~~--~vpvINa~~~~~HPtQaL~D 140 (306)
-.|++++=.|.... +.++..+. +.-|+-.++-...+.+.+..
T Consensus 62 ~~dlvila~p~~~~~~~~~~l~~~~~~~~ii~Dv~Svk~~~~~~~~~ 108 (281)
T 2g5c_A 62 SPDFVMLSSPVRTFREIAKKLSYILSEDATVTDQGSVKGKLVYDLEN 108 (281)
T ss_dssp CCSEEEECSCHHHHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHH
T ss_pred CCCEEEECCCCHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHH
T ss_conf 78889983680443215655531024662132334407999999986
No 189
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=33.61 E-value=21 Score=14.88 Aligned_cols=39 Identities=15% Similarity=0.039 Sum_probs=29.2
Q ss_pred CCCCCCCCEEEECCCCCCCCCHHHCCCCCCEEEEEECHHC
Q ss_conf 0133677304610455554310100123312576520000
Q gi|255764473|r 148 RGSVKGKLFSWSGDGNNILHSLIEGAARFNYLLNIATPIG 187 (306)
Q Consensus 148 ~g~l~~~~i~~vGd~~~v~hS~i~~~~~~g~~v~~~~P~~ 187 (306)
+..++|+++++.|++. -+++++.++.-+|+++..++...
T Consensus 330 ~~~L~GKrv~i~~~~~-~~~~l~~~l~elGmevv~~g~~~ 368 (533)
T 1mio_A 330 KEKLQGKTACLYVGGS-RSHTYMNMLKSFGVDSLVAGFEF 368 (533)
T ss_dssp HHHHTTCEEEEEESSS-HHHHHHHHHHHHTCEEEEEEESS
T ss_pred HHHHCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEEEEC
T ss_conf 9975797499976726-78999999998699699974322
No 190
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=33.60 E-value=9.9 Score=17.07 Aligned_cols=70 Identities=14% Similarity=0.143 Sum_probs=35.0
Q ss_pred HCCCEEEEEECCCCHH--HHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCC---CCCCCHHHC
Q ss_conf 0010111210132006--77630124412404333202467876557664200133677304610455---554310100
Q gi|255764473|r 98 RYVDAIVMRTTNHSRL--LELTEYATVPVINALTDNTHPCQIIADIMTFEEHRGSVKGKLFSWSGDGN---NILHSLIEG 172 (306)
Q Consensus 98 ~~~D~iviR~~~~~~~--~~~~~~~~vpvINa~~~~~HPtQaL~D~~Ti~e~~g~l~~~~i~~vGd~~---~v~hS~i~~ 172 (306)
.-+|++|==+.++... .+++....+|+|-+=+|..-..... +.+.. ++..+.|.+..+ ++...+++.
T Consensus 71 ~~~DViIDFS~p~~~~~~~~~~~~~~~p~ViGTTG~~~~~~~~-----~~~~~---~~~~vl~apNfSlGv~ll~~l~~~ 142 (273)
T 1dih_A 71 DDFDVFIDFTRPEGTLNHLAFCRQHGKGMVIGTTGFDEAGKQA-----IRDAA---ADIAIVFAANFSVGVNVMLKLLEK 142 (273)
T ss_dssp TSCSEEEECSCHHHHHHHHHHHHHTTCEEEECCCCCCHHHHHH-----HHHHT---TTSCEEECSCCCHHHHHHHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHH-----HHHHH---CCCCEECCCCHHHHHHHHHHHHHH
T ss_conf 3578699798989999999999962876799547986013778-----87763---377256377065889999999999
Q ss_pred CCC
Q ss_conf 123
Q gi|255764473|r 173 AAR 175 (306)
Q Consensus 173 ~~~ 175 (306)
+++
T Consensus 143 aa~ 145 (273)
T 1dih_A 143 AAK 145 (273)
T ss_dssp HHH
T ss_pred HHH
T ss_conf 999
No 191
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=32.25 E-value=23 Score=14.74 Aligned_cols=79 Identities=15% Similarity=0.113 Sum_probs=48.1
Q ss_pred CEEEEEECCCCCH----HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH-HHHHCCCEEEEEECCCCH---HHHH
Q ss_conf 8799994288835----7899998986347543333210000123210799999-753001011121013200---6776
Q gi|255764473|r 45 KVLAMIFEKPSTR----TRVSFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTAK-VLSRYVDAIVMRTTNHSR---LLEL 116 (306)
Q Consensus 45 k~i~~lF~e~StR----TR~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~~-~ls~~~D~iviR~~~~~~---~~~~ 116 (306)
.+|+.++...+.= -.-..+.|++++|.+++..+..+. +.-...++ .++..+|++++-..+... +.+.
T Consensus 3 ~kIg~i~~~~~~p~~~~~~~g~~~~a~~~g~~~i~~~~~d~-----~~~~~~i~~~i~~~vdgiIi~~~~~~~~~~~~~~ 77 (306)
T 8abp_A 3 LKLGFLVKQPEEPWFQTEWKFADKAGKDLGFEVIKIAVPDG-----EKTLNAIDSLAASGAKGFVICTPDPKLGSAIVAK 77 (306)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHHHHHHTEEEEEEECCSH-----HHHHHHHHHHHHTTCCEEEEECSCGGGHHHHHHH
T ss_pred EEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCH-----HHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHH
T ss_conf 49999969998889999999999999973999999759999-----9999999999976999899946884224999999
Q ss_pred HCCCCCCEECCC
Q ss_conf 301244124043
Q gi|255764473|r 117 TEYATVPVINAL 128 (306)
Q Consensus 117 ~~~~~vpvINa~ 128 (306)
++...+|||.-.
T Consensus 78 a~~~giPvV~~d 89 (306)
T 8abp_A 78 ARGYDMKVIAVD 89 (306)
T ss_dssp HHHTTCEEEEES
T ss_pred HHHCCCCEEEEE
T ss_conf 997599789997
No 192
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A*
Probab=32.17 E-value=21 Score=14.91 Aligned_cols=13 Identities=15% Similarity=-0.018 Sum_probs=4.7
Q ss_pred CCCCEEEEEECHH
Q ss_conf 2331257652000
Q gi|255764473|r 174 ARFNYLLNIATPI 186 (306)
Q Consensus 174 ~~~g~~v~~~~P~ 186 (306)
..++..+..++|.
T Consensus 154 ~~~~~~v~~~G~~ 166 (302)
T 2h78_A 154 EAMGRNIFHAGPD 166 (302)
T ss_dssp HHHEEEEEEEEST
T ss_pred HHHCCEEEEECCC
T ss_conf 9847918996895
No 193
>3ksm_A ABC-type sugar transport system, periplasmic component; PSI- II, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis kctc 2396}
Probab=31.97 E-value=23 Score=14.71 Aligned_cols=70 Identities=16% Similarity=0.139 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCC-CCCCCCCCHHHHHHHHHH-CCCEEEEEECCCCHHH---HHHCCCCCCEECCCC
Q ss_conf 78999989863475433332100-001232107999997530-0101112101320067---763012441240433
Q gi|255764473|r 58 TRVSFEVAMKHLGGDTIFLSGSE-MQLGRAETIGDTAKVLSR-YVDAIVMRTTNHSRLL---ELTEYATVPVINALT 129 (306)
Q Consensus 58 TR~SFe~A~~~LG~~~~~~~~~~-ss~~kgEsl~Dt~~~ls~-~~D~iviR~~~~~~~~---~~~~~~~vpvINa~~ 129 (306)
=.-.++.++.++|.+++.++... .+..+ -.+..-..++. .+|+|++=..+..... +-+...++|||.-..
T Consensus 18 ~~~g~~~~a~~~g~~~~~~~~~~~~d~~~--q~~~i~~~l~~~~~Dgiii~~~~~~~~~~~i~~~~~~~Ipvv~~d~ 92 (276)
T 3ksm_A 18 VYLGAQKAADEAGVTLLHRSTKDDGDIAG--QIQILSYHLSQAPPDALILAPNSAEDLTPSVAQYRARNIPVLVVDS 92 (276)
T ss_dssp HHHHHHHHHHHHTCEEEECCCSSTTCHHH--HHHHHHHHHHHSCCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESS
T ss_pred HHHHHHHHHHHCCCEEEEEECCCCCCHHH--HHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECC
T ss_conf 99999999998299999995899868999--9999999998279989999279857779999999977994999725
No 194
>2ze6_A Isopentenyl transferase; crown GALL tumor, cytokinin biosynthesis, plasmid; HET: DST AMP; 2.10A {Agrobacterium tumefaciens} PDB: 2ze5_A* 2ze7_A* 2ze8_A
Probab=31.95 E-value=21 Score=14.88 Aligned_cols=81 Identities=11% Similarity=0.074 Sum_probs=43.9
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC-------CHHHHHHHHHHCCCEEEEEECCC------------CHH
Q ss_conf 88835789999898634754333321000012321-------07999997530010111210132------------006
Q gi|255764473|r 53 KPSTRTRVSFEVAMKHLGGDTIFLSGSEMQLGRAE-------TIGDTAKVLSRYVDAIVMRTTNH------------SRL 113 (306)
Q Consensus 53 e~StRTR~SFe~A~~~LG~~~~~~~~~~ss~~kgE-------sl~Dt~~~ls~~~D~iviR~~~~------------~~~ 113 (306)
-.|--|.+|.++ |+++|+.+|+.| ++|+.||= |.++...+--.++| ++.+.+ ..+
T Consensus 10 TasGKS~lAi~L-A~~~~~eIIs~D--S~QvY~~l~IgTakp~~~e~~~v~H~li~---~~~~~~~~s~~~~~~~~~~~i 83 (253)
T 2ze6_A 10 TCSGKTDMAIQI-AQETGWPVVALD--RVQCCPQIATGSGRPLESELQSTRRIYLD---SRPLTEGILDAESAHRRLIFE 83 (253)
T ss_dssp TTSSHHHHHHHH-HHHHCCCEEECC--SGGGCGGGTTTTTCCCGGGGTTCCEECSC---CCCGGGCSCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHH-HHHCCCEEEECC--HHHHCCCCCEEECCCCHHHHCHHCEEEEC---CCCCCCCCCHHHHHHHHHHHH
T ss_conf 752789999999-998699499613--47425999867789997896300201013---558663566999999999999
Q ss_pred HHHHCCCCCCEECCCCCCCHHHHHHHHH
Q ss_conf 7763012441240433320246787655
Q gi|255764473|r 114 LELTEYATVPVINALTDNTHPCQIIADI 141 (306)
Q Consensus 114 ~~~~~~~~vpvINa~~~~~HPtQaL~D~ 141 (306)
.++.+...+||+=+||+.+ .|+|++-
T Consensus 84 ~~~~~~~~~pIlvGGTglY--~~al~~g 109 (253)
T 2ze6_A 84 VDWRKSEEGLILEGGSISL--LNCMAKS 109 (253)
T ss_dssp HHTTTTSSEEEEEECCHHH--HHHHHHC
T ss_pred HHHHHCCCCEEEECCHHHH--HHHHHCC
T ss_conf 9999669988998885999--9999849
No 195
>3ijr_A Oxidoreductase, short chain dehydrogenase/reductase family; structural genomics, infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=31.52 E-value=12 Score=16.58 Aligned_cols=38 Identities=16% Similarity=0.191 Sum_probs=18.5
Q ss_pred CCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 5443798799994288835789999898634754333321
Q gi|255764473|r 39 NKPLSGKVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSG 78 (306)
Q Consensus 39 ~~~l~gk~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~ 78 (306)
+..|+||++ ++. =.|.-==.+.-.+..+-|++|+..+-
T Consensus 42 s~rL~gKva-lIT-Gas~GIG~aiA~~la~~Ga~V~l~~r 79 (291)
T 3ijr_A 42 SEKLKGKNV-LIT-GGDSGIGRAVSIAFAKEGANIAIAYL 79 (291)
T ss_dssp CSTTTTCEE-EEE-TTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCCCEE-EEE-CCCCHHHHHHHHHHHHCCCEEEEEEC
T ss_conf 878898989-993-88878999999999987998999979
No 196
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A*
Probab=31.19 E-value=11 Score=16.89 Aligned_cols=22 Identities=18% Similarity=-0.032 Sum_probs=13.7
Q ss_pred CCHHHCCCCCCEEEEEECHHCC
Q ss_conf 3101001233125765200001
Q gi|255764473|r 167 HSLIEGAARFNYLLNIATPIGS 188 (306)
Q Consensus 167 hS~i~~~~~~g~~v~~~~P~~~ 188 (306)
+|+..-+...|..++.++|-..
T Consensus 170 r~lA~e~~~~gIrVN~V~PG~i 191 (261)
T 1gee_A 170 ETLALEYAPKGIRVNNIGPGAI 191 (261)
T ss_dssp HHHHHHHGGGTCEEEEEEECSB
T ss_pred HHHHHHHHHHCCEEEEEEECCC
T ss_conf 9999996354919999960979
No 197
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=31.11 E-value=13 Score=16.25 Aligned_cols=19 Identities=37% Similarity=0.476 Sum_probs=9.0
Q ss_pred CCCCCCHHHHCCCCCCCCC
Q ss_conf 2213664663068733222
Q gi|255764473|r 205 VALFHDAVQAVKGAHCVFT 223 (306)
Q Consensus 205 i~~~~d~~eal~~aD~V~~ 223 (306)
+.+++|..|++++||+|+.
T Consensus 129 v~vt~D~~EAV~~ADiVIl 147 (358)
T 2b0j_A 129 LKVTSDDREAVEGADIVIT 147 (358)
T ss_dssp CEEESCHHHHHTTCSEEEE
T ss_pred CEEECCHHHHHHCCCEEEE
T ss_conf 8887689999833999999
No 198
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=30.80 E-value=19 Score=15.22 Aligned_cols=14 Identities=21% Similarity=0.306 Sum_probs=7.4
Q ss_pred CHHHHHHHHHHHHH
Q ss_conf 02467876557664
Q gi|255764473|r 132 THPCQIIADIMTFE 145 (306)
Q Consensus 132 ~HPtQaL~D~~Ti~ 145 (306)
.-|.|++....-+.
T Consensus 109 ~s~~~a~~~A~r~~ 122 (281)
T 1oy0_A 109 AGPTAALAAATRFL 122 (281)
T ss_dssp TCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
T ss_conf 89999999999999
No 199
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=30.74 E-value=17 Score=15.48 Aligned_cols=87 Identities=11% Similarity=0.108 Sum_probs=38.7
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHH--HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHH-HCCCEEEEEE--CCCCHHHH
Q ss_conf 4379879999428883578999989--86347543333210000123210799999753-0010111210--13200677
Q gi|255764473|r 41 PLSGKVLAMIFEKPSTRTRVSFEVA--MKHLGGDTIFLSGSEMQLGRAETIGDTAKVLS-RYVDAIVMRT--TNHSRLLE 115 (306)
Q Consensus 41 ~l~gk~i~~lF~e~StRTR~SFe~A--~~~LG~~~~~~~~~~ss~~kgEsl~Dt~~~ls-~~~D~iviR~--~~~~~~~~ 115 (306)
-|+||++ ++-= .|. .+-+++| ..+-|++++..+...- ..|.++.+..-+. ...++..+.. .+...+..
T Consensus 8 ~L~gKva-lITG-as~--GIG~aiA~~la~~Ga~Vvi~~~~~~---~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~ 80 (262)
T 3ksu_A 8 DLKNKVI-VIAG-GIK--NLGALTAKTFALESVNLVLHYHQAK---DSDTANKLKDELEDQGAKVALYQSDLSNEEEVAK 80 (262)
T ss_dssp CCTTCEE-EEET-CSS--HHHHHHHHHHTTSSCEEEEEESCGG---GHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHH
T ss_pred CCCCCEE-EEEC-CCC--HHHHHHHHHHHHCCCEEEEECCCCC---CHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH
T ss_conf 9999989-9938-987--8999999999986998999808867---9899999999999639839999767999999999
Q ss_pred HHC-------CCCCCEECCCCCCCHH
Q ss_conf 630-------1244124043332024
Q gi|255764473|r 116 LTE-------YATVPVINALTDNTHP 134 (306)
Q Consensus 116 ~~~-------~~~vpvINa~~~~~HP 134 (306)
+.+ ..++-|.|||.....|
T Consensus 81 ~~~~~~~~~g~idilvnnaG~~~~~~ 106 (262)
T 3ksu_A 81 LFDFAEKEFGKVDIAINTVGKVLKKP 106 (262)
T ss_dssp HHHHHHHHHCSEEEEEECCCCCCSSC
T ss_pred HHHHHHHHCCCCCEEEECCCCCCCCC
T ss_conf 99999997599989998998889988
No 200
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=30.16 E-value=22 Score=14.79 Aligned_cols=11 Identities=18% Similarity=0.308 Sum_probs=4.2
Q ss_pred CCEEEEEECCC
Q ss_conf 10111210132
Q gi|255764473|r 100 VDAIVMRTTNH 110 (306)
Q Consensus 100 ~D~iviR~~~~ 110 (306)
.|++++=++.+
T Consensus 59 ~Dvvii~tp~~ 69 (320)
T 1f06_A 59 VDVLFLCMGSA 69 (320)
T ss_dssp CSEEEECSCTT
T ss_pred CCEEEECCCCC
T ss_conf 99999878971
No 201
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=30.07 E-value=14 Score=16.17 Aligned_cols=21 Identities=19% Similarity=0.134 Sum_probs=13.2
Q ss_pred CCHHHCCCCCCEEEEEECHHC
Q ss_conf 310100123312576520000
Q gi|255764473|r 167 HSLIEGAARFNYLLNIATPIG 187 (306)
Q Consensus 167 hS~i~~~~~~g~~v~~~~P~~ 187 (306)
+|+..-+...|..++.++|-.
T Consensus 187 r~lA~e~~~~gIrVN~V~PG~ 207 (269)
T 3gk3_A 187 KTLALETAKRGITVNTVSPGY 207 (269)
T ss_dssp HHHHHHHGGGTEEEEEEEECS
T ss_pred HHHHHHHHHCCCEEEEECCCC
T ss_conf 999998865195898763485
No 202
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, structural genomics; HET: NAP; 2.25A {Homo sapiens}
Probab=29.84 E-value=16 Score=15.68 Aligned_cols=92 Identities=14% Similarity=0.070 Sum_probs=46.4
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC-CCCHHHHHHHHH-HCCCEEEEEE--CCCCHHHHH
Q ss_conf 437987999942888357899998986347543333210000123-210799999753-0010111210--132006776
Q gi|255764473|r 41 PLSGKVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSGSEMQLGR-AETIGDTAKVLS-RYVDAIVMRT--TNHSRLLEL 116 (306)
Q Consensus 41 ~l~gk~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~~ss~~k-gEsl~Dt~~~ls-~~~D~iviR~--~~~~~~~~~ 116 (306)
.|+||++. + -=.|.-==...-.+..+.|++|+..+-......+ .+++.++..-+. ....++.+.. .+...+..+
T Consensus 42 rL~GKval-V-TGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~ei~~~G~~~~~~~~Dv~d~~~v~~~ 119 (346)
T 3kvo_A 42 RLAGCTVF-I-TGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAA 119 (346)
T ss_dssp TTTTCEEE-E-ETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred CCCCCEEE-E-ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHH
T ss_conf 56998799-9-385768999999999987998999978777778999999999999997098389996566899999999
Q ss_pred HC-------CCCCCEECCCCCCCHH
Q ss_conf 30-------1244124043332024
Q gi|255764473|r 117 TE-------YATVPVINALTDNTHP 134 (306)
Q Consensus 117 ~~-------~~~vpvINa~~~~~HP 134 (306)
.+ ..++-|-|||.....|
T Consensus 120 v~~~~~~~G~iDiLVNNAG~~~~~~ 144 (346)
T 3kvo_A 120 VEKAIKKFGGIDILVNNASAISLTN 144 (346)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred HHHHHHHHCCCCEEEECCCCCCCCC
T ss_conf 9999998299778997675589989
No 203
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=29.71 E-value=11 Score=16.77 Aligned_cols=10 Identities=10% Similarity=0.082 Sum_probs=4.0
Q ss_pred CCEEEEEECC
Q ss_conf 1011121013
Q gi|255764473|r 100 VDAIVMRTTN 109 (306)
Q Consensus 100 ~D~iviR~~~ 109 (306)
.|++++=.++
T Consensus 66 ~d~Vi~~v~~ 75 (306)
T 3l6d_A 66 SPATIFVLLD 75 (306)
T ss_dssp SSEEEECCSS
T ss_pred CCEEEECCCC
T ss_conf 9978960688
No 204
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A
Probab=29.64 E-value=16 Score=15.67 Aligned_cols=71 Identities=14% Similarity=0.098 Sum_probs=38.0
Q ss_pred CCCCCCCCHHHHHHHHHHC-CCEEEEEEC----CCCHHHHHHCCCCCCEECCCC-C--CCHHHHHHHHHHHHHHHCCCCC
Q ss_conf 0012321079999975300-101112101----320067763012441240433-3--2024678765576642001336
Q gi|255764473|r 81 MQLGRAETIGDTAKVLSRY-VDAIVMRTT----NHSRLLELTEYATVPVINALT-D--NTHPCQIIADIMTFEEHRGSVK 152 (306)
Q Consensus 81 ss~~kgEsl~Dt~~~ls~~-~D~iviR~~----~~~~~~~~~~~~~vpvINa~~-~--~~HPtQaL~D~~Ti~e~~g~l~ 152 (306)
++..+|+... ++++.+ +|++++=.- ....+..+.+.++.|+++|-- . ...| +..=|+|.+ ..
T Consensus 67 s~~~~g~~~~---~~mn~~g~Da~~~GNHEFD~G~~~l~~~~~~~~fp~l~aNi~~~~~~~~---~~~py~I~~----~~ 136 (516)
T 1hp1_A 67 SDLQDAEPDF---RGMNLVGYDAMAIGNHEFDNPLTVLRQQEKWAKFPLLSANIYQKSTGER---LFKPWALFK----RQ 136 (516)
T ss_dssp HHTTTTHHHH---HHHHHHTCCEEECCGGGGSSCHHHHHHHHHHCSSCEECSSEEETTTTEE---SSBSEEEEE----ET
T ss_pred HHHHCCHHHH---HHHHCCCCCEEEECCHHCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCC---CCCCEEEEE----EC
T ss_conf 7774988999---9986579869998804224688999999964799888635530003644---557569997----66
Q ss_pred CCCEEEECC
Q ss_conf 773046104
Q gi|255764473|r 153 GKLFSWSGD 161 (306)
Q Consensus 153 ~~~i~~vGd 161 (306)
|++|+++|-
T Consensus 137 g~kIgiIG~ 145 (516)
T 1hp1_A 137 DLKIAVIGL 145 (516)
T ss_dssp TEEEEEEEE
T ss_pred CEEEEEECC
T ss_conf 827543133
No 205
>1byk_A Protein (trehalose operon repressor); LACI family, phosphate binding, protein structure, trehalose repressor, gene regulation; HET: T6P; 2.50A {Escherichia coli} SCOP: c.93.1.1
Probab=29.57 E-value=25 Score=14.45 Aligned_cols=112 Identities=16% Similarity=0.127 Sum_probs=60.2
Q ss_pred CCEEEEEECCCCC----HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH-HHCCCEEEEEECCCCHHHHHHC
Q ss_conf 9879999428883----5789999898634754333321000012321079999975-3001011121013200677630
Q gi|255764473|r 44 GKVLAMIFEKPST----RTRVSFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTAKVL-SRYVDAIVMRTTNHSRLLELTE 118 (306)
Q Consensus 44 gk~i~~lF~e~St----RTR~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~~~l-s~~~D~iviR~~~~~~~~~~~~ 118 (306)
.|+|+++-..-+. ...-+++.++++.|.+++.++.... .|...+.+..+ +..+|++++-...... .++.+
T Consensus 2 ~k~Igvi~p~~~~~~~~~~~~~i~~~~~~~gy~~~i~~~~~~----~~~~~~~l~~l~~~~vdgiI~~~~~~~~-~~~~~ 76 (255)
T 1byk_A 2 DKVVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMESQFS----PQLVAEHLGVLKRRNIDGVVLFGFTGIT-EEMLA 76 (255)
T ss_dssp CCEEEEEESCTTCHHHHHHHHHHHHHHHHHTCEEEEEECTTC----HHHHHHHHHHHHTTTCCEEEEECCTTCC-TTTSG
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCC----HHHHHHHHHHHHHCCCCEEEECCCCCCH-HHHHH
T ss_conf 989999969988989999999999999985998999948999----8999999999995699899985899656-99999
Q ss_pred CCCCCEECCCCC-CCHHHHHHHHHHHHH----HHCCCCCCCCEEEECC
Q ss_conf 124412404333-202467876557664----2001336773046104
Q gi|255764473|r 119 YATVPVINALTD-NTHPCQIIADIMTFE----EHRGSVKGKLFSWSGD 161 (306)
Q Consensus 119 ~~~vpvINa~~~-~~HPtQaL~D~~Ti~----e~~g~l~~~~i~~vGd 161 (306)
...+|+|--+.. ...|+ +-.|-+..- ++.-..-..+|+++|.
T Consensus 77 ~~~~p~v~i~~~~~~~~~-V~~d~~~~~~~~~~~l~~~G~~~I~~i~~ 123 (255)
T 1byk_A 77 HWQSSLVLLARDAKGFAS-VCYDDEGAIKILMQRLYDQGHRNISYLGV 123 (255)
T ss_dssp GGSSSEEEESSCCSSCEE-EEECHHHHHHHHHHHHHHTTCCCEEEECC
T ss_pred HCCCCEEEEECCCCCCCE-EEECHHHHHHHHHHHHHHCCCCEEEECCC
T ss_conf 779998999347899988-99877999999999998649956997777
No 206
>1hr8_O COX4, cytochrome C oxidase polypeptide IV; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.70A {Saccharomyces cerevisiae}
Probab=29.56 E-value=9.9 Score=17.06 Aligned_cols=12 Identities=58% Similarity=0.620 Sum_probs=10.2
Q ss_pred EECCCCCHHHHH
Q ss_conf 942888357899
Q gi|255764473|r 50 IFEKPSTRTRVS 61 (306)
Q Consensus 50 lF~e~StRTR~S 61 (306)
-||+|-|||-+|
T Consensus 8 rffkpatrtlcs 19 (26)
T 1hr8_O 8 RFFKPATRTLCS 19 (26)
T ss_pred HHCCCHHHHHHC
T ss_conf 203814552310
No 207
>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}
Probab=29.53 E-value=21 Score=14.90 Aligned_cols=94 Identities=13% Similarity=0.121 Sum_probs=50.5
Q ss_pred HHHCCCCCCCCCCCC-------------------CCCCCCCCHHHHHHHHHHCCCEEEEEEC----CCCHHHHHHCCCCC
Q ss_conf 863475433332100-------------------0012321079999975300101112101----32006776301244
Q gi|255764473|r 66 MKHLGGDTIFLSGSE-------------------MQLGRAETIGDTAKVLSRYVDAIVMRTT----NHSRLLELTEYATV 122 (306)
Q Consensus 66 ~~~LG~~~~~~~~~~-------------------ss~~kgEsl~Dt~~~ls~~~D~iviR~~----~~~~~~~~~~~~~v 122 (306)
.+.-+-+++.++.++ ++..+|+..-+.... +.+|++++=.- ....+..+.+.++.
T Consensus 50 ~r~~~~~~l~ldaGD~~~Gs~~~~~~~~~~~~~~~~~~~g~~~~~~~n~--~g~Da~~~GNHEfd~G~~~l~~~~~~~~~ 127 (341)
T 3gve_A 50 HREQNPNTLLVDNGDLIQGNPLGEYAVKYQKDDIISGTKTHPIISVMNA--LKYDAGTLGNHEFNYGLDFLDGTIKGADF 127 (341)
T ss_dssp HHHHCSSEEEEECSCCSCSSHHHHHHHHHHHHHHHHTSSCCHHHHHHHH--TTCCBEECCGGGGTTCHHHHHHHHHTCSS
T ss_pred HHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHH--CCCCEEECCHHHCCCCHHHHHHHHHCCCC
T ss_conf 9965998799977865678602555432034433224467089999870--48876722515302578999999834789
Q ss_pred CEECCC-CC-CCHHH--HHHHHHHHHHHHCCCCCCCCEEEECC
Q ss_conf 124043-33-20246--78765576642001336773046104
Q gi|255764473|r 123 PVINAL-TD-NTHPC--QIIADIMTFEEHRGSVKGKLFSWSGD 161 (306)
Q Consensus 123 pvINa~-~~-~~HPt--QaL~D~~Ti~e~~g~l~~~~i~~vGd 161 (306)
|+++|= .. ...|. .....-+++....|...++||+++|=
T Consensus 128 p~l~aNv~~~~~~~~~~p~~~~~~~~~~~~g~~~g~kIgviG~ 170 (341)
T 3gve_A 128 PIVNANVKTTSGENRYTPYVINEKTLIDENGNEQKVKVGYIGF 170 (341)
T ss_dssp CEECSSEECTTSCBSSCCEEEEEEEEECTTSCEEEEEEEEEEE
T ss_pred CEEEEEEECCCCCCCCCCCCCCCEEEEEECCCEEEEEEEEECC
T ss_conf 7687764637887366775334069998538510389999555
No 208
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=29.48 E-value=11 Score=16.82 Aligned_cols=20 Identities=20% Similarity=0.179 Sum_probs=7.9
Q ss_pred CCHHHHHHCCCCCC---EECCCC
Q ss_conf 20067763012441---240433
Q gi|255764473|r 110 HSRLLELTEYATVP---VINALT 129 (306)
Q Consensus 110 ~~~~~~~~~~~~vp---vINa~~ 129 (306)
+.....+.+.+..| ||-.|+
T Consensus 123 d~~~~i~~~~sg~~~~rvig~gt 145 (309)
T 1ur5_A 123 DAMTYLAAEVSGFPKERVIGQAG 145 (309)
T ss_dssp HHHHHHHHHHHCCCGGGEEECCH
T ss_pred CHHHHHHHHHCCCCHHHEEECCC
T ss_conf 08999999975997577885130
No 209
>2g04_A Probable fatty-acid-COA racemase FAR; isomerase; 2.70A {Mycobacterium tuberculosis H37RV}
Probab=29.10 E-value=25 Score=14.40 Aligned_cols=11 Identities=0% Similarity=-0.260 Sum_probs=6.1
Q ss_pred HHHHHHHHHHH
Q ss_conf 67876557664
Q gi|255764473|r 135 CQIIADIMTFE 145 (306)
Q Consensus 135 tQaL~D~~Ti~ 145 (306)
.||++-++.+.
T Consensus 132 ~~A~sG~~~~~ 142 (359)
T 2g04_A 132 YLSQTGALAAF 142 (359)
T ss_dssp HHHHHTSGGGC
T ss_pred CCCCCCHHHHC
T ss_conf 43541004332
No 210
>2ldx_A APO-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); 2.96A {Mus musculus} SCOP: c.2.1.5 d.162.1.1
Probab=28.73 E-value=17 Score=15.57 Aligned_cols=19 Identities=11% Similarity=0.312 Sum_probs=9.2
Q ss_pred HHHHHHHHHHCCCCCCCCC
Q ss_conf 8999989863475433332
Q gi|255764473|r 59 RVSFEVAMKHLGGDTIFLS 77 (306)
Q Consensus 59 R~SFe~A~~~LG~~~~~~~ 77 (306)
-++|.++.+.++.+..-+|
T Consensus 33 ~~a~~l~~~~~~~el~L~D 51 (331)
T 2ldx_A 33 ACAISILLKGLADELALVD 51 (331)
T ss_dssp HHHHHHHTTTSCSEEEEEC
T ss_pred HHHHHHHHCCCCCEEEEEC
T ss_conf 9999998469988799974
No 211
>2v7p_A L-lactate dehydrogenase; oxidoreductase, phosphorylation, NAD, cytoplasm, glycolysis, thermophIle; HET: NAD; 2.10A {Thermus thermophilus} PDB: 2e37_A* 2v6m_A*
Probab=28.73 E-value=26 Score=14.35 Aligned_cols=71 Identities=8% Similarity=0.070 Sum_probs=30.9
Q ss_pred HHHHHHHHHHC-CCEEEEE--ECCCCHHHHHHCCCCCC---EECCCCC--CCHHHHHHHHHHHHHHHCCCCCCCCEEEEC
Q ss_conf 79999975300-1011121--01320067763012441---2404333--202467876557664200133677304610
Q gi|255764473|r 89 IGDTAKVLSRY-VDAIVMR--TTNHSRLLELTEYATVP---VINALTD--NTHPCQIIADIMTFEEHRGSVKGKLFSWSG 160 (306)
Q Consensus 89 l~Dt~~~ls~~-~D~iviR--~~~~~~~~~~~~~~~vp---vINa~~~--~~HPtQaL~D~~Ti~e~~g~l~~~~i~~vG 160 (306)
+++.+.-+..+ .+++++= .|-+-....+.+.+..| ||-.|+- ..-=...+++.+-+ .-+....-.+|
T Consensus 96 ~~~i~~~i~~~~p~~ivivvsNPvd~~~~~~~k~sg~~~~rvig~gt~LDs~R~~~~ia~~l~v-----~~~~v~~~ViG 170 (310)
T 2v7p_A 96 FAQVVPRVLEAAPEAVLLVATNPVDVMTQVAYRLSGLPPGRVVGSGTILDTARFRALLAEYLRV-----APQSVHAYVLG 170 (310)
T ss_dssp HHHHHHHHHHHCTTCEEEECSSSHHHHHHHHHHHHCCCGGGEEECTTHHHHHHHHHHHHHHHTS-----CGGGEECCEEB
T ss_pred HHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHCC-----CCCCCCCEEEE
T ss_conf 9999998732599739999268743899999997098904411555089999999999998596-----93326334750
Q ss_pred CCCC
Q ss_conf 4555
Q gi|255764473|r 161 DGNN 164 (306)
Q Consensus 161 d~~~ 164 (306)
.|+.
T Consensus 171 eHg~ 174 (310)
T 2v7p_A 171 EHGD 174 (310)
T ss_dssp CSST
T ss_pred CCCC
T ss_conf 5788
No 212
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=28.50 E-value=26 Score=14.33 Aligned_cols=139 Identities=19% Similarity=0.198 Sum_probs=75.6
Q ss_pred HHHHHHHHHH--HHHHHHCCCCCCCCCCCEEEEEECC------CCCHHHH--HHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999999999--9966523666544379879999428------8835789--9998986347543333210000123210
Q gi|255764473|r 19 LSCIIEVAKK--IKNSSENIFENKPLSGKVLAMIFEK------PSTRTRV--SFEVAMKHLGGDTIFLSGSEMQLGRAET 88 (306)
Q Consensus 19 i~~ll~~A~~--~k~~~~~~~~~~~l~gk~i~~lF~e------~StRTR~--SFe~A~~~LG~~~~~~~~~~ss~~kgEs 88 (306)
+..++.+|.. +|..-. .-|+-|-.-+..+.. |+.|.|+ .|-.+...|+|.. +...++...
T Consensus 53 l~ev~~LA~~MT~K~Al~----~lp~GGgKggI~~~p~~~~~~~~e~e~l~R~~~~~l~~l~G~~--i~apDvgt~---- 122 (355)
T 1c1d_A 53 LTDAGKLAGAMTLKMAVS----NLPMGGGKSVIALPAPRHSIDPSTWARILRIHAENIDKLSGNY--WTGPDVNTN---- 122 (355)
T ss_dssp HHHHHHHHHHHHHHHHHT----TCSCEEEEEEEECSSCGGGCCHHHHHHHHHHHHHHHHHTTTSE--EEEECTTCC----
T ss_pred HHHHHHHHHHHHHHHHHH----CCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC--CCCCCCCCC----
T ss_conf 999999999999999981----8998871548832874355787899999999999988751766--334567988----
Q ss_pred HHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHH---HC--CCCCCCCEEEECCCC
Q ss_conf 7999997530010111210132006776301244124043332024678765576642---00--133677304610455
Q gi|255764473|r 89 IGDTAKVLSRYVDAIVMRTTNHSRLLELTEYATVPVINALTDNTHPCQIIADIMTFEE---HR--GSVKGKLFSWSGDGN 163 (306)
Q Consensus 89 l~Dt~~~ls~~~D~iviR~~~~~~~~~~~~~~~vpvINa~~~~~HPtQaL~D~~Ti~e---~~--g~l~~~~i~~vGd~~ 163 (306)
.+|...+...|. .....|+-.+|+...-+.-+..=++++++ ++ +++++++|++-|-+|
T Consensus 123 ~~~m~~i~d~~~-----------------~vtgkp~~~gg~~~~~~aTg~Gv~~~~~~~~~~~g~~~l~g~~VaIQGfGn 185 (355)
T 1c1d_A 123 SADMDTLNDTTE-----------------FVFGRSLERGGAGSSAFTTAVGVFEAMKATVAHRGLGSLDGLTVLVQGLGA 185 (355)
T ss_dssp HHHHHHHHHHCS-----------------CBCCCCGGGTSCCCCHHHHHHHHHHHHHHHHHHTTCCCSTTCEEEEECCSH
T ss_pred HHHHHHHHHHCC-----------------EEEECCCCCCCCCCCCCCEEEEEEEEHHHHHHHCCCCCCCCCEEEEECCCH
T ss_conf 899999853314-----------------323025235898887761357788722789987289986687799981343
Q ss_pred CCCCCHHHCCCCCCEEEEEECH
Q ss_conf 5543101001233125765200
Q gi|255764473|r 164 NILHSLIEGAARFNYLLNIATP 185 (306)
Q Consensus 164 ~v~hS~i~~~~~~g~~v~~~~P 185 (306)
|..+....+...|.++..+..
T Consensus 186 -VG~~~a~~L~~~Ga~vv~~d~ 206 (355)
T 1c1d_A 186 -VGGSLASLAAEAGAQLLVADT 206 (355)
T ss_dssp -HHHHHHHHHHHTTCEEEEECS
T ss_pred -HHHHHHHHHHHHCCEEEECCC
T ss_conf -678999889972989874157
No 213
>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A*
Probab=28.42 E-value=12 Score=16.65 Aligned_cols=71 Identities=14% Similarity=0.164 Sum_probs=32.6
Q ss_pred CCCCCCCHHHHHHHHHHC-CCEEEEEECC----CCHHHHHHCCCCCCEECCCC-C--CCHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 012321079999975300-1011121013----20067763012441240433-3--20246787655766420013367
Q gi|255764473|r 82 QLGRAETIGDTAKVLSRY-VDAIVMRTTN----HSRLLELTEYATVPVINALT-D--NTHPCQIIADIMTFEEHRGSVKG 153 (306)
Q Consensus 82 s~~kgEsl~Dt~~~ls~~-~D~iviR~~~----~~~~~~~~~~~~vpvINa~~-~--~~HPtQaL~D~~Ti~e~~g~l~~ 153 (306)
+..+|+... ..++.+ +|++++=.-+ ...+.++.+.++.|++.|=- . ..-|- ..--+++. ...|
T Consensus 70 ~~~~g~~~~---~~mn~~g~Da~~lGNHEFD~G~~~l~~~~~~~~fp~l~aNv~~~~~~~~~--~~~~~~i~----~~~G 140 (509)
T 3ive_A 70 SLTKGKAII---DIMNTMPFDAVTIGNHEFDHGWDNTLLQLSQAKFPIVQGNIFYQNSSKSF--WDKPYTII----EKDG 140 (509)
T ss_dssp HTTTTHHHH---HHHTTSCCSEECCCGGGGTTCHHHHHHHHTTCSSCBCCCSEEETTSCCBS--SSCSEEEE----EETT
T ss_pred HHHCCHHHH---HHHHCCCCCEEEECHHHCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCC--CCCCEEEE----EECC
T ss_conf 775998999---99874599899984451365889999999758997784454323454646--78886999----9899
Q ss_pred CCEEEECC
Q ss_conf 73046104
Q gi|255764473|r 154 KLFSWSGD 161 (306)
Q Consensus 154 ~~i~~vGd 161 (306)
+||+++|=
T Consensus 141 ~kIgviGl 148 (509)
T 3ive_A 141 VKIGVIGL 148 (509)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
T ss_conf 89999987
No 214
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=27.74 E-value=16 Score=15.65 Aligned_cols=13 Identities=8% Similarity=0.263 Sum_probs=6.1
Q ss_pred HHHHCCCCCCCCC
Q ss_conf 9863475433332
Q gi|255764473|r 65 AMKHLGGDTIFLS 77 (306)
Q Consensus 65 A~~~LG~~~~~~~ 77 (306)
+..+.|++++..+
T Consensus 27 ~la~~Ga~Vvi~~ 39 (259)
T 3edm_A 27 RFAQEGANVVLTY 39 (259)
T ss_dssp HHHHTTCEEEEEE
T ss_pred HHHHCCCEEEEEE
T ss_conf 9998799999984
No 215
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber dsm 13855}
Probab=27.61 E-value=23 Score=14.62 Aligned_cols=71 Identities=13% Similarity=0.112 Sum_probs=29.3
Q ss_pred HHHHHHHHHHC-CCEEEE--EECCCCHHHHHHCCCCCC---EECCCCC--CCHHHHHHHHHHHHHHHCCCCCCCCEEEEC
Q ss_conf 79999975300-101112--101320067763012441---2404333--202467876557664200133677304610
Q gi|255764473|r 89 IGDTAKVLSRY-VDAIVM--RTTNHSRLLELTEYATVP---VINALTD--NTHPCQIIADIMTFEEHRGSVKGKLFSWSG 160 (306)
Q Consensus 89 l~Dt~~~ls~~-~D~ivi--R~~~~~~~~~~~~~~~vp---vINa~~~--~~HPtQaL~D~~Ti~e~~g~l~~~~i~~vG 160 (306)
+++.+..+..+ .+.+++ =.|-+.....+.+.+..| ||-.|+. +.-=-..|++.+-+. -+..+..++|
T Consensus 98 ~~~i~~~i~~~~p~~i~ivvsNPvd~~~~~~~k~sg~~~~rv~G~gt~LDs~R~~~~lA~~l~v~-----~~~V~~~ViG 172 (314)
T 3nep_X 98 VGGVTEQFVEGSPDSTIIVVANPLDVMTYVAYEASGFPTNRVMGMAGVLDTGRFRSFIAEELDVS-----VRDVQALLMG 172 (314)
T ss_dssp HHHHHHHHHTTCTTCEEEECCSSHHHHHHHHHHHHTCCGGGEEECCHHHHHHHHHHHHHHHHTCC-----GGGEEEEEEE
T ss_pred HHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHCCC-----HHHEEEEEEE
T ss_conf 78999877404998469963786138999999956999525787323378899999999996929-----7891678970
Q ss_pred CCCC
Q ss_conf 4555
Q gi|255764473|r 161 DGNN 164 (306)
Q Consensus 161 d~~~ 164 (306)
.|+.
T Consensus 173 ~Hg~ 176 (314)
T 3nep_X 173 GHGD 176 (314)
T ss_dssp SSGG
T ss_pred CCCC
T ss_conf 7799
No 216
>1oao_A CODH, carbon monoxide dehydrogenase beta subunit; electron transfer, oxidoreductase, acetyl-COA formation, WOOD/ljungdahl pathway; 1.90A {Moorella thermoacetica} SCOP: e.26.1.2 PDB: 1mjg_A 2z8y_A 3i01_A 3i04_A
Probab=27.40 E-value=13 Score=16.28 Aligned_cols=94 Identities=13% Similarity=0.065 Sum_probs=40.5
Q ss_pred CC-CEECCCC--CCCHHHHHHHHHHHHHHHCC-CCCCCCEEEECC--CCCCCCCHHHCCCCCCEEEEEECHHCCCCCCCC
Q ss_conf 44-1240433--32024678765576642001-336773046104--555543101001233125765200001321000
Q gi|255764473|r 121 TV-PVINALT--DNTHPCQIIADIMTFEEHRG-SVKGKLFSWSGD--GNNILHSLIEGAARFNYLLNIATPIGSEPRNEY 194 (306)
Q Consensus 121 ~v-pvINa~~--~~~HPtQaL~D~~Ti~e~~g-~l~~~~i~~vGd--~~~v~hS~i~~~~~~g~~v~~~~P~~~~~~~~~ 194 (306)
.+ ||+|.|+ +.+|-.++.+-+. +.+| ++..+.++.+-. .+-=+-+-...+..+|..+++..++...-.+..
T Consensus 540 gIPpVL~~GsCvDn~r~~~~a~aLA---~~lg~din~LP~~~~apew~eqKAvaI~~~~lalGI~~~lGp~ppv~gS~~V 616 (674)
T 1oao_A 540 GLPPVFHMGSCVDNSRAVDLLMAMA---NDLGVDTPKVPFVASAPEAMSGKAAAIGTWWVSLGVPTHVGTMPPVEGSDLI 616 (674)
T ss_dssp CCCSEEEEESGGGHHHHHHHHHHHH---HHHTSCGGGSCEEEEETTCCSHHHHHHHHHHHHTTCEEEESSCCSCTTCHHH
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHH---HHHCCCCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHH
T ss_conf 9998612235671799999999999---9868994348835665157779999999999981992788999876668899
Q ss_pred HHHHH-----CCCCCCCCCCCHHHHCCC
Q ss_conf 02432-----013322213664663068
Q gi|255764473|r 195 LNWAR-----NQGASVALFHDAVQAVKG 217 (306)
Q Consensus 195 ~~~~~-----~~g~~i~~~~d~~eal~~ 217 (306)
.+... ..|..+.+..|+.++.+.
T Consensus 617 ~~~L~e~~~~~~Gg~~~ve~Dp~~~a~~ 644 (674)
T 1oao_A 617 YSILTQIASDVYGGYFIFEMDPQVAARK 644 (674)
T ss_dssp HHHHHTHHHHHTSCEEEECSSHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEECCCHHHHHHH
T ss_conf 9999976675327479956899999999
No 217
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=27.39 E-value=17 Score=15.48 Aligned_cols=58 Identities=10% Similarity=0.188 Sum_probs=32.8
Q ss_pred CCEEEEEECCCCCH-HHHHHHHHHHHCCCCCCCCCCCCC---CCCC-CCC----H--HHHHHHHHHCCCEEEE
Q ss_conf 98799994288835-789999898634754333321000---0123-210----7--9999975300101112
Q gi|255764473|r 44 GKVLAMIFEKPSTR-TRVSFEVAMKHLGGDTIFLSGSEM---QLGR-AET----I--GDTAKVLSRYVDAIVM 105 (306)
Q Consensus 44 gk~i~~lF~e~StR-TR~SFe~A~~~LG~~~~~~~~~~s---s~~k-gEs----l--~Dt~~~ls~~~D~ivi 105 (306)
.|+|+.|=- -. =|. +-.||++||.+|+.+++.++ ++.. .+. . .|++.-++.-+|++..
T Consensus 24 ~k~IgIlG~---GQLg~m-l~~aA~~LGi~v~vld~~~~pa~~va~ad~~i~~~~~D~~al~~~a~~~DvIT~ 92 (403)
T 3k5i_A 24 SRKVGVLGG---GQLGRM-LVESANRLNIQVNVLDADNSPAKQISAHDGHVTGSFKEREAVRQLAKTCDVVTA 92 (403)
T ss_dssp CCEEEEECC---SHHHHH-HHHHHHHHTCEEEEEESTTCTTGGGCCSSCCEESCTTCHHHHHHHHTTCSEEEE
T ss_pred CCEEEEECC---CHHHHH-HHHHHHHCCCEEEEEECCCCCHHHCCCCCEEEECCCCCHHHHHHHHHCCCEEEE
T ss_conf 988999868---799999-999999789989999689998665100520697788999999999861999998
No 218
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=27.35 E-value=25 Score=14.42 Aligned_cols=15 Identities=7% Similarity=-0.070 Sum_probs=5.7
Q ss_pred CCCCCEEEEEECHHC
Q ss_conf 123312576520000
Q gi|255764473|r 173 AARFNYLLNIATPIG 187 (306)
Q Consensus 173 ~~~~g~~v~~~~P~~ 187 (306)
+..++-.+..+++.+
T Consensus 154 l~~~~~~i~~~G~~G 168 (301)
T 3cky_A 154 LSVIGKDIYHVGDTG 168 (301)
T ss_dssp HHHHEEEEEEEESTT
T ss_pred HHHHCCCEEEECCCC
T ss_conf 998489779958975
No 219
>2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, structural genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A
Probab=27.32 E-value=22 Score=14.86 Aligned_cols=29 Identities=7% Similarity=-0.001 Sum_probs=23.6
Q ss_pred EEECCCCCHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 99428883578999989863475433332100
Q gi|255764473|r 49 MIFEKPSTRTRVSFEVAMKHLGGDTIFLSGSE 80 (306)
Q Consensus 49 ~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~~ 80 (306)
..|.|+| ..||+.|+.++|++.+++|..-
T Consensus 34 ~~~pENT---l~af~~A~~~~Gad~iE~DV~~ 62 (287)
T 2oog_A 34 GYAPEHT---FQAYDKSHNELKASYIEIDLQR 62 (287)
T ss_dssp TTSCSSS---HHHHHHHHHTSCCSEEEEEEEE
T ss_pred CCCCCCH---HHHHHHHHHHCCCCEEEEEEEE
T ss_conf 9997206---9999999997599989987899
No 220
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=27.25 E-value=27 Score=14.19 Aligned_cols=83 Identities=11% Similarity=0.174 Sum_probs=51.1
Q ss_pred CCEEEEEECCCCC---------HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH-HHCCCEEEEEECCC-CH
Q ss_conf 9879999428883---------5789999898634754333321000012321079999975-30010111210132-00
Q gi|255764473|r 44 GKVLAMIFEKPST---------RTRVSFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTAKVL-SRYVDAIVMRTTNH-SR 112 (306)
Q Consensus 44 gk~i~~lF~e~St---------RTR~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~~~l-s~~~D~iviR~~~~-~~ 112 (306)
.++|+++....+. .--.+++.++.+.|.+++.+.... ..|..++..+.+ +..+|++++-.... ..
T Consensus 7 t~~Igvi~~~~~~~~~~npf~~~~~~gi~~~a~~~Gy~l~~~~~~~----~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~ 82 (295)
T 3hcw_A 7 TYKIGLVLKGSEEPIRLNPFYINVLLGISETCNQHGYGTQTTVSNN----MNDLMDEVYKMIKQRMVDAFILLYSKENDP 82 (295)
T ss_dssp SCEEEEECSCCCHHHHSCHHHHHHHHHHHHHHHTTTCEEEECCCCS----HHHHHHHHHHHHHTTCCSEEEESCCCTTCH
T ss_pred CCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCC----CHHHHHHHHHHHHHCCCCEEEEECCCCCCH
T ss_conf 7979999816876665697999999999999998699899997899----979999999999958998899976656609
Q ss_pred HHHHHCCCCCCEECCCCC
Q ss_conf 677630124412404333
Q gi|255764473|r 113 LLELTEYATVPVINALTD 130 (306)
Q Consensus 113 ~~~~~~~~~vpvINa~~~ 130 (306)
..+......+|+|.-+..
T Consensus 83 ~~~~l~~~~iPvV~~~~~ 100 (295)
T 3hcw_A 83 IKQMLIDESMPFIVIGKP 100 (295)
T ss_dssp HHHHHHHTTCCEEEESCC
T ss_pred HHHHHHHCCCCEEEEECC
T ss_conf 999999759988998314
No 221
>1q7e_A Hypothetical protein YFDW; structural genomics, intertwined dimer, PSI, protein structure initiative; HET: MSE; 1.60A {Escherichia coli} SCOP: c.123.1.1 PDB: 1pqy_A* 1q6y_A* 1pt7_A 1pt5_A 1pt8_A*
Probab=26.58 E-value=28 Score=14.11 Aligned_cols=10 Identities=30% Similarity=0.537 Sum_probs=5.0
Q ss_pred HHCCCCCCCC
Q ss_conf 6347543333
Q gi|255764473|r 67 KHLGGDTIFL 76 (306)
Q Consensus 67 ~~LG~~~~~~ 76 (306)
..||+.||-+
T Consensus 29 ad~GAeVIkv 38 (428)
T 1q7e_A 29 AWFGADVIKI 38 (428)
T ss_dssp HHTTCEEEEE
T ss_pred HHHCCEEEEE
T ss_conf 9809919998
No 222
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=26.26 E-value=17 Score=15.49 Aligned_cols=38 Identities=5% Similarity=-0.110 Sum_probs=18.3
Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 37987999942888357899998986347543333210
Q gi|255764473|r 42 LSGKVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSGS 79 (306)
Q Consensus 42 l~gk~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~ 79 (306)
|..+.+=.++--..+.++...-.++.+-|-+++---|-
T Consensus 62 l~~~~~D~V~i~tp~~~H~~~~~~al~~gkhv~~EKP~ 99 (344)
T 3mz0_A 62 LADENVDAVLVTSWGPAHESSVLKAIKAQKYVFCEKPL 99 (344)
T ss_dssp HHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSCS
T ss_pred HCCCCCCEEEECCCCCCHHHHHHHHHHCCCCEEECCCC
T ss_conf 55999888996265211599999998549972646874
No 223
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum atcc 13032}
Probab=26.23 E-value=28 Score=14.09 Aligned_cols=17 Identities=18% Similarity=0.126 Sum_probs=6.7
Q ss_pred HHHHHHHHHHHCCCCCC
Q ss_conf 78999989863475433
Q gi|255764473|r 58 TRVSFEVAMKHLGGDTI 74 (306)
Q Consensus 58 TR~SFe~A~~~LG~~~~ 74 (306)
++...-..+-+-|-+++
T Consensus 77 ~h~~~~~~al~~gk~Vl 93 (344)
T 3euw_A 77 THVDLITRAVERGIPAL 93 (344)
T ss_dssp GHHHHHHHHHHTTCCEE
T ss_pred CHHHHHHHHHHHCCCEE
T ss_conf 10356799885137511
No 224
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=26.14 E-value=16 Score=15.69 Aligned_cols=84 Identities=12% Similarity=0.154 Sum_probs=40.5
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH-CCCEEEEEEC--CCCHHHHHH
Q ss_conf 4379879999428883578999989863475433332100001232107999997530-0101112101--320067763
Q gi|255764473|r 41 PLSGKVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTAKVLSR-YVDAIVMRTT--NHSRLLELT 117 (306)
Q Consensus 41 ~l~gk~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~~~ls~-~~D~iviR~~--~~~~~~~~~ 117 (306)
.|+||++ ++ -=.|---=.+.-.+..+-|++|+..+.. ..|.++++..-+.. ..++..+... +...+..+.
T Consensus 26 sL~GKva-lV-TGas~GIG~aiA~~la~~Ga~Vvi~~~~-----~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~ 98 (283)
T 1g0o_A 26 SLEGKVA-LV-TGAGRGIGREMAMELGRRGCKVIVNYAN-----STESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMF 98 (283)
T ss_dssp CCTTCEE-EE-TTTTSHHHHHHHHHHHHTTCEEEEEESS-----CHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred CCCCCEE-EE-ECCCCHHHHHHHHHHHHCCCEEEEECCC-----CHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHH
T ss_conf 8899989-99-3878689999999999879989997189-----778999999999972996899987789999999999
Q ss_pred -----C--CCCCCEECCCCCC
Q ss_conf -----0--1244124043332
Q gi|255764473|r 118 -----E--YATVPVINALTDN 131 (306)
Q Consensus 118 -----~--~~~vpvINa~~~~ 131 (306)
+ ..++-|-|||...
T Consensus 99 ~~~~~~~G~iDilVnnAg~~~ 119 (283)
T 1g0o_A 99 EEAVKIFGKLDIVCSNSGVVS 119 (283)
T ss_dssp HHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHCCCCEEEECCCCCC
T ss_conf 999998499869997860167
No 225
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=25.89 E-value=23 Score=14.63 Aligned_cols=12 Identities=8% Similarity=-0.208 Sum_probs=5.3
Q ss_pred CCCCCCEEEEEE
Q ss_conf 012331257652
Q gi|255764473|r 172 GAARFNYLLNIA 183 (306)
Q Consensus 172 ~~~~~g~~v~~~ 183 (306)
-+...|..+.-+
T Consensus 172 e~~~~gi~V~~~ 183 (252)
T 3h7a_A 172 ELMPKNIHVAHL 183 (252)
T ss_dssp HHGGGTEEEEEE
T ss_pred HHHHHCCEEEEE
T ss_conf 860658879999
No 226
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.00A {Bacillus cereus atcc 14579}
Probab=25.84 E-value=13 Score=16.36 Aligned_cols=32 Identities=9% Similarity=0.152 Sum_probs=16.1
Q ss_pred CCCEEEEEECCCCHHH---HHHCCC--CCCEECCCCC
Q ss_conf 0101112101320067---763012--4412404333
Q gi|255764473|r 99 YVDAIVMRTTNHSRLL---ELTEYA--TVPVINALTD 130 (306)
Q Consensus 99 ~~D~iviR~~~~~~~~---~~~~~~--~vpvINa~~~ 130 (306)
-.|++++=.+++.... ++..+. +.-||+-..+
T Consensus 63 ~~dviilavkP~~~~~vl~~~~~~~~~~~~iiSi~ag 99 (247)
T 3gt0_A 63 NADILILSIKPDLYASIINEIKEIIKNDAIIVTIAAG 99 (247)
T ss_dssp HCSEEEECSCTTTHHHHC---CCSSCTTCEEEECSCC
T ss_pred CCCCEEEECCCCHHHHHHHHHHCCCCCCCEEEEECCC
T ss_conf 3884588448714544457663013577425651357
No 227
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=25.69 E-value=29 Score=14.00 Aligned_cols=88 Identities=13% Similarity=0.050 Sum_probs=46.8
Q ss_pred CEEEEEECCCCCHHHH----HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCC
Q ss_conf 8799994288835789----999898634754333321000012321079999975300101112101320067763012
Q gi|255764473|r 45 KVLAMIFEKPSTRTRV----SFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTAKVLSRYVDAIVMRTTNHSRLLELTEYA 120 (306)
Q Consensus 45 k~i~~lF~e~StRTR~----SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~~~ls~~~D~iviR~~~~~~~~~~~~~~ 120 (306)
-.|..+|-.|..|.+- ++..-|.+.|..+...+. ++ .+.+.+.++ +.-+|++++=....-...++-+..
T Consensus 24 ~~i~~V~t~~~~~~~~~~~~~v~~~a~~~~ip~~~~~~----~~-~~~~~~~l~--~~~~dl~i~~~~~~ii~~~il~~~ 96 (305)
T 2bln_A 24 YEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDN----VN-HPLWVERIA--QLSPDVIFSFYYRHLIYDEILQLA 96 (305)
T ss_dssp CEEEEEECCCC------CCCCHHHHHHHHTCCEECCSC----CC-SHHHHHHHH--HTCCSEEEEESCCSCCCHHHHTTC
T ss_pred CCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCEECCCC----CC-CHHHHHHHH--HCCCCEEEEEHHHHHCCHHHHHHC
T ss_conf 98899990899998878989899999986998984598----99-899999998--329999998632124049999732
Q ss_pred CCCEECCC-C--C---CCHHHH-HHH
Q ss_conf 44124043-3--3---202467-876
Q gi|255764473|r 121 TVPVINAL-T--D---NTHPCQ-IIA 139 (306)
Q Consensus 121 ~vpvINa~-~--~---~~HPtQ-aL~ 139 (306)
...++|.- + . ..+|.| ++.
T Consensus 97 ~~~~lN~HpslLP~yRG~~p~~wai~ 122 (305)
T 2bln_A 97 PAGAFNLHGSLLPKYRGRAPLNWVLV 122 (305)
T ss_dssp TTCEEEEESSCTTTTEESCHHHHHHH
T ss_pred CCCCEEECCCCCCCCCCHHHHHHHHH
T ss_conf 10320322343774678528999997
No 228
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=25.65 E-value=16 Score=15.77 Aligned_cols=69 Identities=13% Similarity=0.096 Sum_probs=37.2
Q ss_pred HHHHHHHC-CCEEEEEECC----CCHHHHHHCCCCCCEECCC-CCCCHHHHHHHHHHHHH-----HHCCCCCCCCEEEEC
Q ss_conf 99975300-1011121013----2006776301244124043-33202467876557664-----200133677304610
Q gi|255764473|r 92 TAKVLSRY-VDAIVMRTTN----HSRLLELTEYATVPVINAL-TDNTHPCQIIADIMTFE-----EHRGSVKGKLFSWSG 160 (306)
Q Consensus 92 t~~~ls~~-~D~iviR~~~----~~~~~~~~~~~~vpvINa~-~~~~HPtQaL~D~~Ti~-----e~~g~l~~~~i~~vG 160 (306)
+++.++.+ +|+.++=.-+ ...+..+.+.++.|+++|= -+... -+-+..-|.+. +.-|...|+||+++|
T Consensus 85 ~~~~~n~~g~Da~~~GNHEFD~G~~~l~~~~~~~~~p~l~aNv~~~~~-~~~~~~py~i~~~~v~~~~g~~~g~kIgviG 163 (339)
T 3jyf_A 85 VYKAMNTLNYAVGNLGNHEFNYGLDFLHKALAGAKFPYVNANIIDAKT-GKPMFTPYLIQDTRVVDSDGQIHTLRIGYIG 163 (339)
T ss_dssp HHHHHTTSCCSEEECCGGGGTTCHHHHHHHHHTCSSCEECSSEEETTT-SSBSSCCEEEEEEEEECTTSCEEEEEEEEEE
T ss_pred HHHHHHHCCCCEEECCHHHHHCCHHHHHHHHHCCCCCEEEEEECCCCC-CCCCCCCCCCCEEEEEECCCCCCCEEEEEEC
T ss_conf 999997559881611247665279999999740679877664033667-8727788601206887515513336998860
Q ss_pred C
Q ss_conf 4
Q gi|255764473|r 161 D 161 (306)
Q Consensus 161 d 161 (306)
-
T Consensus 164 ~ 164 (339)
T 3jyf_A 164 F 164 (339)
T ss_dssp E
T ss_pred C
T ss_conf 5
No 229
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=25.50 E-value=13 Score=16.36 Aligned_cols=80 Identities=10% Similarity=-0.017 Sum_probs=36.0
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCC----CC----CCHHHHHHHHHHCCCEEEEEECCCCH---HHHHHCCC-CCCEECC
Q ss_conf 9999898634754333321000012----32----10799999753001011121013200---67763012-4412404
Q gi|255764473|r 60 VSFEVAMKHLGGDTIFLSGSEMQLG----RA----ETIGDTAKVLSRYVDAIVMRTTNHSR---LLELTEYA-TVPVINA 127 (306)
Q Consensus 60 ~SFe~A~~~LG~~~~~~~~~~ss~~----kg----Esl~Dt~~~ls~~~D~iviR~~~~~~---~~~~~~~~-~vpvINa 127 (306)
.|+-.+.++-|.++.-++...+... .| -.++++..-.....|++|+=.|.... +.++..+. +.-|+--
T Consensus 21 ~Sla~aL~~~g~~V~g~D~~~~~~~~A~~~g~~~~~~~~~~l~~a~~~~DLIIlavPv~~i~~vl~~l~~~~~~~ivTDV 100 (341)
T 3ktd_A 21 GSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVSADLEATLQRAAAEDALIVLAVPMTAIDSLLDAVHTHAPNNGFTDV 100 (341)
T ss_dssp HHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEESCHHHHHHHHHHTTCEEEECSCHHHHHHHHHHHHHHCTTCCEEEC
T ss_pred HHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCCCCEEECH
T ss_conf 99999998787989999899999999998599854510056877404686899669736666656765124664334113
Q ss_pred CCCCCHHHHHHH
Q ss_conf 333202467876
Q gi|255764473|r 128 LTDNTHPCQIIA 139 (306)
Q Consensus 128 ~~~~~HPtQaL~ 139 (306)
++-...+++++.
T Consensus 101 gSvK~~i~~~~~ 112 (341)
T 3ktd_A 101 VSVKTAVYDAVK 112 (341)
T ss_dssp CSCSHHHHHHHH
T ss_pred HHHHHHHHHHHH
T ss_conf 455289999988
No 230
>3a8t_A Adenylate isopentenyltransferase; rossmann fold protein; HET: ATP; 2.37A {Humulus lupulus}
Probab=25.12 E-value=30 Score=13.94 Aligned_cols=92 Identities=18% Similarity=0.248 Sum_probs=53.3
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCH-------HHHHHHHHHCCCEEE-EE-ECCC---
Q ss_conf 79879999428883578999989863475433332100001232107-------999997530010111-21-0132---
Q gi|255764473|r 43 SGKVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSGSEMQLGRAETI-------GDTAKVLSRYVDAIV-MR-TTNH--- 110 (306)
Q Consensus 43 ~gk~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl-------~Dt~~~ls~~~D~iv-iR-~~~~--- 110 (306)
+.|.|+.+=--.|--|++|.++| +++||.+|..| ++|+.||=.+ ++...+-=.++|++- .. ..+-
T Consensus 39 k~kvI~I~GpTasGKT~lAi~LA-~~l~~eIIsaD--S~QvYk~ldIgTaKpt~~e~~~vpHhLid~v~p~~~~ysv~~f 115 (339)
T 3a8t_A 39 KEKLLVLMGATGTGKSRLSIDLA-AHFPLEVINSD--KMQVYKGLDITTNKISVPDRGGVPHHLLGEVDPARGELTPADF 115 (339)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHH-TTSCEEEEECC--SSTTBSSCTTTTTCCCSGGGTTCCEESSSCBCGGGCCCCHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHH-HHCCCEEEECC--CHHHCCCCCEEECCCCHHHHCCCCEEEEEEEECCCCEEEHHHH
T ss_conf 88679998988428999999999-98799799523--0642699974889999999838997999899737663559999
Q ss_pred -----CHHHHHHCCCCCCEECCCCCCCHHHHHHH
Q ss_conf -----00677630124412404333202467876
Q gi|255764473|r 111 -----SRLLELTEYATVPVINALTDNTHPCQIIA 139 (306)
Q Consensus 111 -----~~~~~~~~~~~vpvINa~~~~~HPtQaL~ 139 (306)
..+.++.+...+||+=||+|.+ -++|+
T Consensus 116 ~~~A~~~I~~i~~rgkiPIlVGGTglY--l~ALL 147 (339)
T 3a8t_A 116 RSLAGKAVSEITGRRKLPVLVGGSNSF--IHALL 147 (339)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCCHHH--HHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCHHH--HHHHH
T ss_conf 999999999998489964997572078--89886
No 231
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=25.04 E-value=18 Score=15.38 Aligned_cols=22 Identities=9% Similarity=-0.016 Sum_probs=9.1
Q ss_pred CCCCHHHHHHCCCCCC---EECCCC
Q ss_conf 1320067763012441---240433
Q gi|255764473|r 108 TNHSRLLELTEYATVP---VINALT 129 (306)
Q Consensus 108 ~~~~~~~~~~~~~~vp---vINa~~ 129 (306)
|-+-....+.+.+..| +|-+|+
T Consensus 135 Pvd~~t~~~~k~sg~~~~rvig~gt 159 (329)
T 1b8p_A 135 PANTNAYIAMKSAPSLPAKNFTAML 159 (329)
T ss_dssp SHHHHHHHHHHTCTTSCGGGEEECC
T ss_pred CHHHHHHHHHHHCCCCCCCEEEEEC
T ss_conf 0788999999975999856686401
No 232
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=24.88 E-value=30 Score=13.91 Aligned_cols=25 Identities=20% Similarity=-0.003 Sum_probs=11.5
Q ss_pred CCCEEEECCCCCCCCCHHHCCCCCC
Q ss_conf 7730461045555431010012331
Q gi|255764473|r 153 GKLFSWSGDGNNILHSLIEGAARFN 177 (306)
Q Consensus 153 ~~~i~~vGd~~~v~hS~i~~~~~~g 177 (306)
+.||.+.|-.+-+...+++.+..-|
T Consensus 315 kkkILVTGatGfIGs~Lv~~Ll~~g 339 (660)
T 1z7e_A 315 RTRVLILGVNGFIGNHLTERLLRED 339 (660)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHSS
T ss_pred CCEEEEECCCCEEHHHHHHHHHHCC
T ss_conf 8889990787383999999999679
No 233
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=24.84 E-value=30 Score=13.90 Aligned_cols=13 Identities=23% Similarity=0.120 Sum_probs=6.4
Q ss_pred CHHHCCCCCCEEE
Q ss_conf 1010012331257
Q gi|255764473|r 168 SLIEGAARFNYLL 180 (306)
Q Consensus 168 S~i~~~~~~g~~v 180 (306)
++-..+..||++.
T Consensus 188 a~~Y~~~~~gl~~ 200 (286)
T 3gi1_A 188 AFSYLAKRFGLKQ 200 (286)
T ss_dssp CCHHHHHHTTCEE
T ss_pred CHHHHHHHCCCCE
T ss_conf 4689999839851
No 234
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=24.66 E-value=30 Score=13.88 Aligned_cols=138 Identities=10% Similarity=0.037 Sum_probs=68.1
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCC------------CCCCCCCCHHHHHHHHHHCCCEEEEEECCCCH
Q ss_conf 879999428883578999989863475433332100------------00123210799999753001011121013200
Q gi|255764473|r 45 KVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSGSE------------MQLGRAETIGDTAKVLSRYVDAIVMRTTNHSR 112 (306)
Q Consensus 45 k~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~~------------ss~~kgEsl~Dt~~~ls~~~D~iviR~~~~~~ 112 (306)
+.|.++..-.+.----....=...+|.+++.+...+ +....|-+++|..++-+.-..+.+-+......
T Consensus 170 ~~vNiig~~~~~~d~~el~~lL~~~Gi~~~~~~~~s~~~~~~~~~~~~~~~~gg~~le~i~~~~~A~lniv~~~~~~~~~ 249 (458)
T 1mio_B 170 GKINVIPGFVGPADMREIKRLFEAMDIPYIMFPDTSGVLDGPTTGEYKMYPEGGTKIEDLKDTGNSDLTLSLGSYASDLG 249 (458)
T ss_dssp SCEEEECCSCCHHHHHHHHHHHHHHTCCEEESSCCTTTSSCCCCSSCCSSCSCSBCHHHHHTTSSCSEEEEESHHHHHHH
T ss_pred CEEEEECCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHCCCEEEEECHHHHHHH
T ss_conf 74899899887014999999999829956752562002346656751043279997999997641889999885565789
Q ss_pred HHHHHCCCCCCEECCCCC-C----CHHHHHHHHHHHH-----------------HHHCCCCCCCCEEEECCCCCCCCCHH
Q ss_conf 677630124412404333-2----0246787655766-----------------42001336773046104555543101
Q gi|255764473|r 113 LLELTEYATVPVINALTD-N----THPCQIIADIMTF-----------------EEHRGSVKGKLFSWSGDGNNILHSLI 170 (306)
Q Consensus 113 ~~~~~~~~~vpvINa~~~-~----~HPtQaL~D~~Ti-----------------~e~~g~l~~~~i~~vGd~~~v~hS~i 170 (306)
...+.+...+|.+..... . ..=-+.|++.+=. .+.+..+.|+++++.|+..+ +.++.
T Consensus 250 A~~L~~~~GiPyi~~~~p~G~~~t~~~l~~l~~~~G~~~~~~i~~er~~~~~~~~~~~~~l~gkrv~I~~~~~~-~~~l~ 328 (458)
T 1mio_B 250 AKTLEKKCKVPFKTLRTPIGVSATDEFIMALSEATGKEVPASIEEERGQLIDLMIDAQQYLQGKKVALLGDPDE-IIALS 328 (458)
T ss_dssp HHHHHHHSCCCEEEECCCBHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHTHHHHTTCEEEEEECHHH-HHHHH
T ss_pred HHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHH
T ss_conf 99999986998785588768789999999999996898178788769999999999999728988999898288-99999
Q ss_pred HCCCCCCEEEEEE
Q ss_conf 0012331257652
Q gi|255764473|r 171 EGAARFNYLLNIA 183 (306)
Q Consensus 171 ~~~~~~g~~v~~~ 183 (306)
..+..+|+.+..+
T Consensus 329 ~~L~elG~~~~~~ 341 (458)
T 1mio_B 329 KFIIELGAIPKYV 341 (458)
T ss_dssp HHHHTTTCEEEEE
T ss_pred HHHHHCCCEEEEE
T ss_conf 9999839900389
No 235
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionine MAD, decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=24.65 E-value=29 Score=14.05 Aligned_cols=31 Identities=19% Similarity=0.184 Sum_probs=12.8
Q ss_pred CCCEEEEEECCCCHHHHHHCCCCCCEECCCC
Q ss_conf 0101112101320067763012441240433
Q gi|255764473|r 99 YVDAIVMRTTNHSRLLELTEYATVPVINALT 129 (306)
Q Consensus 99 ~~D~iviR~~~~~~~~~~~~~~~vpvINa~~ 129 (306)
.+.++|+-+-+.....++.+..++|+|.-|.
T Consensus 174 Gaf~ivlE~Vp~~la~~It~~l~IPtIGIGA 204 (264)
T 1m3u_A 174 GAQLLVLECVPVELAKRITEALAIPVIGIGA 204 (264)
T ss_dssp TCCEEEEESCCHHHHHHHHHHCSSCEEEESS
T ss_pred HHHEEEEECCCHHHHHHHHCCCCCEEEEECC
T ss_conf 3046775317588999986267741897258
No 236
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=24.52 E-value=16 Score=15.63 Aligned_cols=29 Identities=17% Similarity=0.083 Sum_probs=14.1
Q ss_pred CHHHHHHCCCCCCEECCCCCCCHHHHHHH
Q ss_conf 00677630124412404333202467876
Q gi|255764473|r 111 SRLLELTEYATVPVINALTDNTHPCQIIA 139 (306)
Q Consensus 111 ~~~~~~~~~~~vpvINa~~~~~HPtQaL~ 139 (306)
..+.+.++...+++|++.+-.-=++..|+
T Consensus 115 ~~l~~~a~~~g~~~i~~~G~~PGls~~la 143 (365)
T 2z2v_A 115 LELRDEAEKAQVTIVFDAGFAPGLSNILM 143 (365)
T ss_dssp GGGHHHHHHTTCEEECSCBTTTBHHHHHH
T ss_pred ECCCCHHCCCCCEEEECCCCCCCHHHHHH
T ss_conf 11210011578237861478866477999
No 237
>1qo0_D AMIR; binding protein, gene regulator, receptor; 2.25A {Pseudomonas aeruginosa} SCOP: c.23.1.3
Probab=24.30 E-value=17 Score=15.61 Aligned_cols=25 Identities=8% Similarity=0.098 Sum_probs=13.0
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 8883578999989863475433332
Q gi|255764473|r 53 KPSTRTRVSFEVAMKHLGGDTIFLS 77 (306)
Q Consensus 53 e~StRTR~SFe~A~~~LG~~~~~~~ 77 (306)
++.---|......-.++|.+|....
T Consensus 19 dd~~~~~~~l~~~L~~~G~~v~~~~ 43 (196)
T 1qo0_D 19 NPPGEVSDALVLQLIRIGCSVRQCW 43 (196)
T ss_dssp SCTTHHHHHHHHHHHHHTCEEEEEC
T ss_pred ECCHHHHHHHHHHHHHCCCEEECCC
T ss_conf 5799999999999998699887169
No 238
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=24.30 E-value=31 Score=13.84 Aligned_cols=82 Identities=13% Similarity=0.217 Sum_probs=48.4
Q ss_pred CEEEEEECCCC----CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH-HHHHCCCEEEEEECCCC---HHHHH
Q ss_conf 87999942888----357899998986347543333210000123210799999-75300101112101320---06776
Q gi|255764473|r 45 KVLAMIFEKPS----TRTRVSFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTAK-VLSRYVDAIVMRTTNHS---RLLEL 116 (306)
Q Consensus 45 k~i~~lF~e~S----tRTR~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~~-~ls~~~D~iviR~~~~~---~~~~~ 116 (306)
|||+++--.-+ .+-.-.++.+++++|.+++....... .+.-.+.+. +++...|++++-..... .....
T Consensus 2 rTIgvvvp~~~~~f~~~~~~gi~~~a~~~g~~~~~~~~~~d----~~~~~~~i~~~~~~~~~~ii~~~~~~~~~~~~~~~ 77 (283)
T 2ioy_A 2 KTIGLVISTLNNPFFVTLKNGAEEKAKELGYKIIVEDSQND----SSKELSNVEDLIQQKVDVLLINPVDSDAVVTAIKE 77 (283)
T ss_dssp CEEEEEESCSSSHHHHHHHHHHHHHHHHHTCEEEEEECTTC----HHHHHHHHHHHHHTTCSEEEECCSSTTTTHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCC----HHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHH
T ss_conf 29999847898989999999999999986999999938999----89999999999960877033101122222067788
Q ss_pred HCCCCCCEECCCCC
Q ss_conf 30124412404333
Q gi|255764473|r 117 TEYATVPVINALTD 130 (306)
Q Consensus 117 ~~~~~vpvINa~~~ 130 (306)
.....+|+|-.++.
T Consensus 78 ~~~~~~p~V~~~~~ 91 (283)
T 2ioy_A 78 ANSKNIPVITIDRS 91 (283)
T ss_dssp HHHTTCCEEEESSC
T ss_pred HHHCCCCEEEECCC
T ss_conf 87458967998257
No 239
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=24.25 E-value=30 Score=13.94 Aligned_cols=17 Identities=24% Similarity=0.454 Sum_probs=8.6
Q ss_pred HHHHHHHHHCCCCCCCC
Q ss_conf 99998986347543333
Q gi|255764473|r 60 VSFEVAMKHLGGDTIFL 76 (306)
Q Consensus 60 ~SFe~A~~~LG~~~~~~ 76 (306)
.+|..++.+.|.+.+..
T Consensus 27 ~~~A~~~d~agiDiilV 43 (275)
T 1o66_A 27 SSFAALMDDAGVEMLLV 43 (275)
T ss_dssp HHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHCCCCEEEE
T ss_conf 99999999869988998
No 240
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=23.73 E-value=30 Score=13.89 Aligned_cols=41 Identities=15% Similarity=0.090 Sum_probs=17.6
Q ss_pred HHHHHHHHHCC--CEEEEEECCCCHHHHHHCCCCCC---EECCCCC
Q ss_conf 99999753001--01112101320067763012441---2404333
Q gi|255764473|r 90 GDTAKVLSRYV--DAIVMRTTNHSRLLELTEYATVP---VINALTD 130 (306)
Q Consensus 90 ~Dt~~~ls~~~--D~iviR~~~~~~~~~~~~~~~vp---vINa~~~ 130 (306)
++.+..+..+. .++|+-.|-+.....+.+.+..| ||-+|+.
T Consensus 104 ~~~~~~i~~~~~~~I~vvsnPvd~~~~~~~~~~g~~~~rvig~gt~ 149 (313)
T 1hye_A 104 GKYAKKIAEICDTKIFVITNPVDVMTYKALVDSKFERNQVFGLGTH 149 (313)
T ss_dssp HHHHHHHHHHCCCEEEECSSSHHHHHHHHHHHHCCCTTSEEECTTH
T ss_pred HHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCEEEEEEH
T ss_conf 9999999754557289833763589999998669995478986108
No 241
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=23.72 E-value=32 Score=13.76 Aligned_cols=37 Identities=11% Similarity=0.013 Sum_probs=18.6
Q ss_pred HHHHHHHH-CCCEEEEEECCCCHHHHHHCCCCCCEECC
Q ss_conf 99997530-01011121013200677630124412404
Q gi|255764473|r 91 DTAKVLSR-YVDAIVMRTTNHSRLLELTEYATVPVINA 127 (306)
Q Consensus 91 Dt~~~ls~-~~D~iviR~~~~~~~~~~~~~~~vpvINa 127 (306)
+....+.. -+|.++.=....-...++-+.....+||.
T Consensus 70 ~l~~~l~~~~~Dliv~~g~~~ii~~~il~~~~~~~iN~ 107 (209)
T 1meo_A 70 AIDLVLEEFSIDIVCLAGFMRILSGPFVQKWNGKMLNI 107 (209)
T ss_dssp HHHHHHHHTTCCEEEEESCCSCCCHHHHHHTTTSEEEE
T ss_pred HHHHHHHHHCCCEEEEECCCHHCCHHHHHHHHCCCEEC
T ss_conf 99999986199999995600107789998760795875
No 242
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 1llc_A*
Probab=23.43 E-value=14 Score=16.02 Aligned_cols=52 Identities=13% Similarity=0.116 Sum_probs=21.7
Q ss_pred ECCCCHHHHHHCCCCCC---EECCCCC--CCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCC
Q ss_conf 01320067763012441---2404333--202467876557664200133677304610455
Q gi|255764473|r 107 TTNHSRLLELTEYATVP---VINALTD--NTHPCQIIADIMTFEEHRGSVKGKLFSWSGDGN 163 (306)
Q Consensus 107 ~~~~~~~~~~~~~~~vp---vINa~~~--~~HPtQaL~D~~Ti~e~~g~l~~~~i~~vGd~~ 163 (306)
.|-+.....+.+++..| +|-+|+- ..--.+.|++.+-+.. +.....++|.|+
T Consensus 126 NPvd~~~~~~~~~sg~~~~rvig~gt~LDs~R~~~~la~~l~v~~-----~~V~~~ViG~Hg 182 (326)
T 2zqz_A 126 NPVDILTYATWKLSGFPKNRVVGSGTSLDTARFRQSIAEMVNVDA-----RSVHAYIMGEHG 182 (326)
T ss_dssp SSHHHHHHHHHHHHCCCGGGEEECTTHHHHHHHHHHHHHHHTCCG-----GGEECCEEBSSS
T ss_pred CCCHHHHHHHHHHHCCCHHHEEECCCHHHHHHHHHHHHHHHCCCH-----HHEEEEEECCCC
T ss_conf 861489999999709982657705732658999999999857882-----314535735899
No 243
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=23.21 E-value=32 Score=13.70 Aligned_cols=19 Identities=16% Similarity=0.072 Sum_probs=10.1
Q ss_pred HHHHH-HHHHCCCEEEEEEC
Q ss_conf 99999-75300101112101
Q gi|255764473|r 90 GDTAK-VLSRYVDAIVMRTT 108 (306)
Q Consensus 90 ~Dt~~-~ls~~~D~iviR~~ 108 (306)
.++++ .....+|++-+-..
T Consensus 161 ~~AA~~a~~AGfDgVEiH~a 180 (363)
T 3l5l_A 161 VDAARRARDAGFEWIELHFA 180 (363)
T ss_dssp HHHHHHHHHHTCSEEEEEEC
T ss_pred HHHHHHHHHCCCCEEECCCC
T ss_conf 99999999629675321345
No 244
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase family, NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=23.21 E-value=32 Score=13.70 Aligned_cols=43 Identities=7% Similarity=0.090 Sum_probs=16.8
Q ss_pred ECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 4288835789999898634754333321000012321079999
Q gi|255764473|r 51 FEKPSTRTRVSFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTA 93 (306)
Q Consensus 51 F~e~StRTR~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~ 93 (306)
|--..+-++...-..+.+-|-+++.--|-..+....+.+.+.+
T Consensus 76 ~I~tp~~~h~~~~~~al~~Gk~V~~EKP~a~~~~e~~~l~~~a 118 (346)
T 3cea_A 76 FIVAPTPFHPEMTIYAMNAGLNVFCEKPLGLDFNEVDEMAKVI 118 (346)
T ss_dssp EECSCGGGHHHHHHHHHHTTCEEEECSCCCSCHHHHHHHHHHH
T ss_pred EEECHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHH
T ss_conf 9957176589999999864985988557422212211567888
No 245
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=23.17 E-value=32 Score=13.70 Aligned_cols=86 Identities=19% Similarity=0.168 Sum_probs=39.9
Q ss_pred CCCCCCCCCCCCCCCCCCC-----------HHHHHHHHHHC-CCEEEEEE--CCCCHHHHHHCCC-CCCEECCCCCCCHH
Q ss_conf 7543333210000123210-----------79999975300-10111210--1320067763012-44124043332024
Q gi|255764473|r 70 GGDTIFLSGSEMQLGRAET-----------IGDTAKVLSRY-VDAIVMRT--TNHSRLLELTEYA-TVPVINALTDNTHP 134 (306)
Q Consensus 70 G~~~~~~~~~~ss~~kgEs-----------l~Dt~~~ls~~-~D~iviR~--~~~~~~~~~~~~~-~vpvINa~~~~~HP 134 (306)
+++++.+.++.. ...||+ +++.+.-+..+ .+++++=. |-+.....+.+.+ .-+||..|+
T Consensus 67 ~aDivvitaG~~-~k~g~tR~dll~~Na~I~~~i~~~i~~~~p~~ivivvsNPvd~~t~v~~~~sp~~~v~g~gt----- 140 (304)
T 2v6b_A 67 DAQVVILTAGAN-QKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPVDLLTDLATQLAPGQPVIGSGT----- 140 (304)
T ss_dssp TCSEEEECC-------------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSSHHHHHHHHHHHSCSSCEEECTT-----
T ss_pred CCCEEEEECCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCC-----
T ss_conf 888899806888-89999888988746799999999987429973999955840489999998479877778686-----
Q ss_pred HHHHHHHHHHHHH----CC-CCCCCCEEEECCCCC
Q ss_conf 6787655766420----01-336773046104555
Q gi|255764473|r 135 CQIIADIMTFEEH----RG-SVKGKLFSWSGDGNN 164 (306)
Q Consensus 135 tQaL~D~~Ti~e~----~g-~l~~~~i~~vGd~~~ 164 (306)
.+|-.-++.. ++ .-...+..++|.|+.
T Consensus 141 ---~LDs~R~~~~ia~~l~v~~~~V~~~ViGeHgd 172 (304)
T 2v6b_A 141 ---VLDSARFRHLMAQHAGVDGTHAHGYVLGEHGD 172 (304)
T ss_dssp ---HHHHHHHHHHHHHHHTSCGGGEECCEEESSST
T ss_pred ---EEEHHHHHHHHHHHHCCCCCCCCCEEECCCCC
T ss_conf ---64098899999998356834564515417898
No 246
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=22.63 E-value=21 Score=15.00 Aligned_cols=39 Identities=18% Similarity=0.172 Sum_probs=16.5
Q ss_pred HHHHHHHHC-CCEEEEE--ECCCCHHHHHHCCCCCC---EECCCC
Q ss_conf 999975300-1011121--01320067763012441---240433
Q gi|255764473|r 91 DTAKVLSRY-VDAIVMR--TTNHSRLLELTEYATVP---VINALT 129 (306)
Q Consensus 91 Dt~~~ls~~-~D~iviR--~~~~~~~~~~~~~~~vp---vINa~~ 129 (306)
+.+..+..+ .+++++= .|-+-....+.+.+..| +|-+|+
T Consensus 103 ~~~~~i~~~~p~~ivivvsNPvd~~t~~~~k~sg~~~~rvig~gT 147 (318)
T 1ez4_A 103 SIVKPVVDSGFDGIFLVAANPVDILTYATWKFSGFPKERVIGSGT 147 (318)
T ss_dssp HHHHHHHHTTCCSEEEECSSSHHHHHHHHHHHHCCCGGGEEECTT
T ss_pred HHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCHHEEECCC
T ss_conf 999999962578389996588517899999971988120877365
No 247
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=22.47 E-value=33 Score=13.61 Aligned_cols=13 Identities=15% Similarity=0.095 Sum_probs=4.4
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 6877559999999
Q gi|255764473|r 286 DEAENRLHTQKAI 298 (306)
Q Consensus 286 ~Qa~Ngl~vr~Ai 298 (306)
+++-+-+-+-.|+
T Consensus 307 ~~a~~~~~i~~a~ 319 (344)
T 3ezy_A 307 EDGKMALLLGYAA 319 (344)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999999
No 248
>3ez4_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; cytoplasm, magnesium, metal-binding, pantothenate biosynthesis; 2.10A {Burkholderia pseudomallei}
Probab=22.40 E-value=33 Score=13.61 Aligned_cols=18 Identities=17% Similarity=0.298 Sum_probs=9.4
Q ss_pred HHHHHHHHHCCCCCCCCC
Q ss_conf 999989863475433332
Q gi|255764473|r 60 VSFEVAMKHLGGDTIFLS 77 (306)
Q Consensus 60 ~SFe~A~~~LG~~~~~~~ 77 (306)
.+|..++.+-|.+.+-.+
T Consensus 33 ~~~A~~~~~agiDiiLVG 50 (269)
T 3ez4_A 33 ASFAALLDRANVDVQLIG 50 (269)
T ss_dssp HHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHCCCCEEEEE
T ss_conf 999999987799899994
No 249
>1uc8_A LYSX, lysine biosynthesis enzyme; alpha-aminoadipate pathway, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.00A {Thermus thermophilus} SCOP: c.30.1.6 d.142.1.7 PDB: 1uc9_A*
Probab=22.40 E-value=34 Score=13.60 Aligned_cols=75 Identities=19% Similarity=0.191 Sum_probs=37.0
Q ss_pred EEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCH---HHHHHCCCCCC
Q ss_conf 999942888357899998986347543333210000123210799999753001011121013200---67763012441
Q gi|255764473|r 47 LAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTAKVLSRYVDAIVMRTTNHSR---LLELTEYATVP 123 (306)
Q Consensus 47 i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~~~ls~~~D~iviR~~~~~~---~~~~~~~~~vp 123 (306)
+++++...=.=+|.=+ .|++++|..+..++..+....-.+... -...+|.++.|...... +....+...+|
T Consensus 2 ~~~~~~~~r~~e~~l~-~a~~~~G~~v~~v~~~~~~~~~~~~~~-----~~~~~d~~~~~~~~~~~~~~~~~~~e~~g~~ 75 (280)
T 1uc8_A 2 LAILYDRIRPDERMLF-ERAEALGLPYKKVYVPALPMVLGERPK-----ELEGVTVALERCVSQSRGLAAARYLTALGIP 75 (280)
T ss_dssp EEEEESSCCHHHHHHH-HHHHHHTCCEEEEEGGGCCEETTBCCG-----GGTTCCEEEECCSSHHHHHHHHHHHHHTTCC
T ss_pred EEEEECCCCHHHHHHH-HHHHHCCCEEEEEECCCCCEECCCCCC-----CCCCCEEEEEEECCCCCHHHHHHHHHHCCCC
T ss_conf 9999658888999999-999977998999978976234477644-----3103508999803566089999999988995
Q ss_pred EECC
Q ss_conf 2404
Q gi|255764473|r 124 VINA 127 (306)
Q Consensus 124 vINa 127 (306)
++|-
T Consensus 76 ~~n~ 79 (280)
T 1uc8_A 76 VVNR 79 (280)
T ss_dssp EESC
T ss_pred EECC
T ss_conf 8799
No 250
>1xk7_A Crotonobetainyl-COA:carnitine COA-transferase; CAIB, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics; 1.60A {Escherichia coli} SCOP: c.123.1.1 PDB: 1xk6_A 1xvt_A* 1xvu_A* 1xvv_A* 1xa3_A* 1xa4_A*
Probab=22.27 E-value=34 Score=13.58 Aligned_cols=10 Identities=20% Similarity=0.650 Sum_probs=4.4
Q ss_pred HHCCCCCCCC
Q ss_conf 6347543333
Q gi|255764473|r 67 KHLGGDTIFL 76 (306)
Q Consensus 67 ~~LG~~~~~~ 76 (306)
..||++||-+
T Consensus 37 adlGA~VIkv 46 (408)
T 1xk7_A 37 AEWGAEVIWI 46 (408)
T ss_dssp HHTTCEEEEE
T ss_pred HHHCCEEEEE
T ss_conf 9809959998
No 251
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=22.08 E-value=34 Score=13.56 Aligned_cols=22 Identities=9% Similarity=0.141 Sum_probs=10.1
Q ss_pred CCCHHHHHHH-HHHHHHHHHHHH
Q ss_conf 9710686877-559999999999
Q gi|255764473|r 280 PQSVVFDEAE-NRLHTQKAILLW 301 (306)
Q Consensus 280 ~~s~~~~Qa~-Ngl~vr~AiL~~ 301 (306)
|.---++|++ .|.-..+.+++.
T Consensus 384 P~~~~l~~~~~~G~~la~~~~~~ 406 (414)
T 2q9u_A 384 YTEELLEQAYNAGVDLGKRAIAY 406 (414)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99899999999999999999985
No 252
>1jf8_A Arsenate reductase; ptpase I fold, P-loop, sulfinic acid, oxidoreductase; 1.12A {Staphylococcus aureus} SCOP: c.44.1.1 PDB: 1jfv_A 2fxi_A 1lju_A* 1rxi_A 1rxe_A 1ljl_A 2cd7_A 1lk0_A
Probab=21.88 E-value=34 Score=13.53 Aligned_cols=71 Identities=13% Similarity=0.045 Sum_probs=34.5
Q ss_pred CCCEEEECCCCCCCCCHHH-CC-CCC---CEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCC--CH-HHHCCCCCCCCCC
Q ss_conf 7730461045555431010-01-233---125765200001321000024320133222136--64-6630687332221
Q gi|255764473|r 153 GKLFSWSGDGNNILHSLIE-GA-ARF---NYLLNIATPIGSEPRNEYLNWARNQGASVALFH--DA-VQAVKGAHCVFTD 224 (306)
Q Consensus 153 ~~~i~~vGd~~~v~hS~i~-~~-~~~---g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~--d~-~eal~~aD~V~~~ 224 (306)
.++|.+|.-+ |+++|-+. ++ ..+ ++.+.-++-.+....+..+...+..|..+.... .+ .+.++.+|+|++.
T Consensus 3 k~~IlFVC~g-N~cRS~mAEa~~~~~~~~~~~v~SAG~~~~~~~p~a~~~l~~~gid~~~~~sk~l~~~~~~~~D~Ii~m 81 (131)
T 1jf8_A 3 KKTIYFISTG-NSARSQMAEGWGKEILGEGWNVYSAGIETHGVNPKAIEAMKEVDIDISNHTSDLIDNDILKQSDLVVTL 81 (131)
T ss_dssp CEEEEEEESS-SSSHHHHHHHHHHHHSTTTEEEEEEESSCCCCCHHHHHHHHHTTCCCTTCCCCBCCHHHHHHCSEEEEC
T ss_pred CCEEEEEECC-CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCEEEEC
T ss_conf 8879999399-847999999999974889689953664466888289999986298745564750663327776199936
No 253
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidoreductase; HET: FMN; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2ohi_A* 2ohj_A*
Probab=21.86 E-value=34 Score=13.53 Aligned_cols=10 Identities=0% Similarity=-0.011 Sum_probs=4.6
Q ss_pred HCCCCCCCCC
Q ss_conf 3068733222
Q gi|255764473|r 214 AVKGAHCVFT 223 (306)
Q Consensus 214 al~~aD~V~~ 223 (306)
.+.++|.++.
T Consensus 304 ~~~~~d~ii~ 313 (404)
T 2ohh_A 304 DILESGAIAL 313 (404)
T ss_dssp HHHTCSEEEE
T ss_pred HHHHCCCEEE
T ss_conf 9985795599
No 254
>2gci_A Probable alpha-methylacyl-COA racemase MCR; COA transferase, proton transfer, coenzyme A, isomerase; HET: MRR; 1.60A {Mycobacterium tuberculosis} SCOP: c.123.1.1 PDB: 2gce_A* 1x74_A* 2gd0_A* 2gd2_A* 2gd6_A*
Probab=21.68 E-value=35 Score=13.51 Aligned_cols=14 Identities=21% Similarity=0.247 Sum_probs=6.6
Q ss_pred HHHHHHHHCCCEEE
Q ss_conf 99997530010111
Q gi|255764473|r 91 DTAKVLSRYVDAIV 104 (306)
Q Consensus 91 Dt~~~ls~~~D~iv 104 (306)
+.++-|-.-+|+++
T Consensus 68 ~~l~~L~~~aDv~i 81 (360)
T 2gci_A 68 ELALKLIAKADVLI 81 (360)
T ss_dssp HHHHHHHTTCSEEE
T ss_pred HHHHHHHHHCCEEE
T ss_conf 99999885389999
No 255
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=21.67 E-value=26 Score=14.38 Aligned_cols=38 Identities=18% Similarity=0.211 Sum_probs=19.5
Q ss_pred CCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 5443798799994288835789999898634754333321
Q gi|255764473|r 39 NKPLSGKVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSG 78 (306)
Q Consensus 39 ~~~l~gk~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~ 78 (306)
+-.|+||++. +- =.|.-==...-.+..+.|++|+..+-
T Consensus 13 ~g~L~gKval-IT-Ggs~GIG~aiA~~la~~Ga~V~i~~r 50 (303)
T 1yxm_A 13 PGLLQGQVAI-VT-GGATGIGKAIVKELLELGSNVVIASR 50 (303)
T ss_dssp TTTTTTCEEE-EE-TTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCCCEEE-EE-CCCCHHHHHHHHHHHHCCCEEEEEEC
T ss_conf 9877979899-93-89868999999999987998999979
No 256
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=21.37 E-value=25 Score=14.45 Aligned_cols=20 Identities=20% Similarity=0.109 Sum_probs=11.6
Q ss_pred CCHHHCCCCCCEEEEEECHH
Q ss_conf 31010012331257652000
Q gi|255764473|r 167 HSLIEGAARFNYLLNIATPI 186 (306)
Q Consensus 167 hS~i~~~~~~g~~v~~~~P~ 186 (306)
+++..-+...|..++.++|-
T Consensus 167 ~~lA~el~~~gIrVN~I~PG 186 (247)
T 2hq1_A 167 KSIAKEFAAKGIYCNAVAPG 186 (247)
T ss_dssp HHHHHHHGGGTEEEEEEEEC
T ss_pred HHHHHHHHCCCEEEEEEECC
T ss_conf 99999972149699998549
No 257
>2z04_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; purine nucleotide biosynthetic pathway, structural genomics, NPPSFA; 2.35A {Aquifex aeolicus}
Probab=21.36 E-value=22 Score=14.79 Aligned_cols=44 Identities=14% Similarity=0.007 Sum_probs=21.8
Q ss_pred HHHHHHHCCCCCCCCCCCCCC----CCCCCCHHHHHHHHHHCCCEEEE
Q ss_conf 998986347543333210000----12321079999975300101112
Q gi|255764473|r 62 FEVAMKHLGGDTIFLSGSEMQ----LGRAETIGDTAKVLSRYVDAIVM 105 (306)
Q Consensus 62 Fe~A~~~LG~~~~~~~~~~ss----~~kgEsl~Dt~~~ls~~~D~ivi 105 (306)
+-.||++||.+|+.+++..-+ +...---.|++.-++..+|++..
T Consensus 16 l~~aAk~lGi~v~v~d~~~~~pa~~vAd~~~d~~~l~~~a~~~DvIt~ 63 (365)
T 2z04_A 16 TILEGRKLGFKFHVLEDKENAPACRVADRCFRTGQISEFVDSCDIITY 63 (365)
T ss_dssp HHHHHGGGTCEEEEECSSSSCHHHHHSSEEECGGGHHHHHHHCSEEEE
T ss_pred HHHHHHHCCCEEEEEECCCCCCHHHHCCHHCCHHHHHHHHHCCCEEEE
T ss_conf 999999789989999569989766726154279999999844999998
No 258
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=21.13 E-value=23 Score=14.68 Aligned_cols=19 Identities=21% Similarity=0.167 Sum_probs=10.8
Q ss_pred CHHHHHHCCCCCCEECCCC
Q ss_conf 0067763012441240433
Q gi|255764473|r 111 SRLLELTEYATVPVINALT 129 (306)
Q Consensus 111 ~~~~~~~~~~~vpvINa~~ 129 (306)
..+.+.++...+.+++..+
T Consensus 126 ~~L~~~a~~~g~~~~~~~G 144 (467)
T 2axq_A 126 RELEPEIVKAGITVMNEIG 144 (467)
T ss_dssp HHHHHHHHHHTCEEECSCB
T ss_pred HHHHHHHHCCCEEEECCCC
T ss_conf 9987676327847712666
No 259
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=20.86 E-value=36 Score=13.40 Aligned_cols=46 Identities=11% Similarity=0.001 Sum_probs=20.1
Q ss_pred EEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 9942888357899998986347543333210000123210799999
Q gi|255764473|r 49 MIFEKPSTRTRVSFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTAK 94 (306)
Q Consensus 49 ~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~~ 94 (306)
.++--....++...-.++.+-|-+++---|-..++...+.+.+.++
T Consensus 94 ~V~I~tp~~~H~~~~~~al~~g~~v~~EKP~~~~~~e~~~l~~~~~ 139 (444)
T 2ixa_A 94 AVFVSSPWEWHHEHGVAAMKAGKIVGMEVSGAITLEECWDYVKVSE 139 (444)
T ss_dssp EEEECCCGGGHHHHHHHHHHTTCEEEECCCCCSSHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHH
T ss_conf 8998588276899999999719877741889899999999999999
No 260
>1zh8_A Oxidoreductase; TM0312, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI; HET: MSE NAP; 2.50A {Thermotoga maritima MSB8} SCOP: c.2.1.3 d.81.1.5
Probab=20.76 E-value=23 Score=14.62 Aligned_cols=34 Identities=9% Similarity=0.062 Sum_probs=12.5
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 9999898634754333321000012321079999
Q gi|255764473|r 60 VSFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTA 93 (306)
Q Consensus 60 ~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~ 93 (306)
...-.++-+-|-+|+---|-..++...+.+.+.+
T Consensus 96 ~~~~~~al~agk~Vl~EKP~~~~~~e~~~l~~~a 129 (340)
T 1zh8_A 96 LPFIEKALRKGVHVICEKPISTDVETGKKVVELS 129 (340)
T ss_dssp HHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHH
T ss_conf 7899999866996576367413211134666677
No 261
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, short chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=20.73 E-value=21 Score=14.97 Aligned_cols=87 Identities=15% Similarity=0.234 Sum_probs=39.8
Q ss_pred CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH-CCCEEEEEEC--CCCHHH
Q ss_conf 6544379879999428883578999989863475433332100001232107999997530-0101112101--320067
Q gi|255764473|r 38 ENKPLSGKVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTAKVLSR-YVDAIVMRTT--NHSRLL 114 (306)
Q Consensus 38 ~~~~l~gk~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~~~ls~-~~D~iviR~~--~~~~~~ 114 (306)
..+||+||++ ++ -=.|.-==...-....+-|++|+.....+ .+.++.+..-+.. ..+++.+... +...+.
T Consensus 15 ~~~pL~GKva-lV-TGas~GIG~aiA~~la~~Ga~Vvi~~~~~-----~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~v~ 87 (274)
T 1ja9_A 15 ASKPLAGKVA-LT-TGAGRGIGRGIAIELGRRGASVVVNYGSS-----SKAAEEVVAELKKLGAQGVAIQADISKPSEVV 87 (274)
T ss_dssp -CCTTTTCEE-EE-TTTTSHHHHHHHHHHHHTTCEEEEEESSC-----HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHH
T ss_pred CCCCCCCCEE-EE-ECCCCHHHHHHHHHHHHCCCEEEEECCCC-----HHHHHHHHHHHHHCCCCEEEEECCCCCHHHHH
T ss_conf 9989999989-99-68886899999999998799899972898-----78999999999973995899982489999999
Q ss_pred HHH-----C--CCCCCEECCCCCC
Q ss_conf 763-----0--1244124043332
Q gi|255764473|r 115 ELT-----E--YATVPVINALTDN 131 (306)
Q Consensus 115 ~~~-----~--~~~vpvINa~~~~ 131 (306)
.+. + ..++-|-|||...
T Consensus 88 ~~~~~~~~~~G~iDiLVnnAG~~~ 111 (274)
T 1ja9_A 88 ALFDKAVSHFGGLDFVMSNSGMEV 111 (274)
T ss_dssp HHHHHHHHHHSCEEEEECCCCCCC
T ss_pred HHHHHHHHHHCCCCEEEECCCCCC
T ss_conf 999999998299879997860368
No 262
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=20.59 E-value=37 Score=13.36 Aligned_cols=17 Identities=18% Similarity=0.136 Sum_probs=9.6
Q ss_pred HHHHHHHHHHCCCCCCC
Q ss_conf 89999898634754333
Q gi|255764473|r 59 RVSFEVAMKHLGGDTIF 75 (306)
Q Consensus 59 R~SFe~A~~~LG~~~~~ 75 (306)
+.+|+..+.+++++...
T Consensus 67 ~~~f~~~~~~f~m~~~~ 83 (288)
T 3obi_A 67 RTGFGVIAAKFTMGWHM 83 (288)
T ss_dssp HHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHCCCCCC
T ss_conf 99888777651553112
No 263
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=20.58 E-value=37 Score=13.36 Aligned_cols=32 Identities=13% Similarity=0.083 Sum_probs=17.8
Q ss_pred CCCEEEEEECCCCH---HHHHHCC--CCCCEECCCCC
Q ss_conf 01011121013200---6776301--24412404333
Q gi|255764473|r 99 YVDAIVMRTTNHSR---LLELTEY--ATVPVINALTD 130 (306)
Q Consensus 99 ~~D~iviR~~~~~~---~~~~~~~--~~vpvINa~~~ 130 (306)
..|++++-.|++.. +.++.++ .+.++|++--|
T Consensus 90 ~~d~iiiavPS~~~~~~~~~~~~~l~~~~~iv~~~KG 126 (354)
T 1x0v_A 90 DADILIFVVPHQFIGKICDQLKGHLKANATGISLIKG 126 (354)
T ss_dssp TCSEEEECCCGGGHHHHHHHHTTCSCTTCEEEECCCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEE
T ss_conf 7657765350599999998877764225416774100
No 264
>2g31_A Reticulon-4; NOGO, helix, signaling protein; NMR {Homo sapiens} PDB: 2jv5_A
Probab=20.50 E-value=18 Score=15.32 Aligned_cols=23 Identities=30% Similarity=0.563 Sum_probs=14.3
Q ss_pred EECCC--CCCCHHHHHHHHH-HHHHH
Q ss_conf 24043--3320246787655-76642
Q gi|255764473|r 124 VINAL--TDNTHPCQIIADI-MTFEE 146 (306)
Q Consensus 124 vINa~--~~~~HPtQaL~D~-~Ti~e 146 (306)
|+.|. ++..||-|+++|. .|+.+
T Consensus 6 vlqavqKtd~gHPFk~yLd~Ditls~ 31 (60)
T 2g31_A 6 VIQAIQKSDEGHPFRAYLESEVAISE 31 (60)
T ss_dssp TTTHHHHHHHHCTTHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCCHHHHHCCCCCCH
T ss_conf 99999816899984887546568799
No 265
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=20.04 E-value=38 Score=13.28 Aligned_cols=79 Identities=19% Similarity=0.202 Sum_probs=46.8
Q ss_pred CCEEEEEECCCC----CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHH-HHHCCCEEEEEECCC--CHHHHH
Q ss_conf 987999942888----3578999989863475433332100001232107999997-530010111210132--006776
Q gi|255764473|r 44 GKVLAMIFEKPS----TRTRVSFEVAMKHLGGDTIFLSGSEMQLGRAETIGDTAKV-LSRYVDAIVMRTTNH--SRLLEL 116 (306)
Q Consensus 44 gk~i~~lF~e~S----tRTR~SFe~A~~~LG~~~~~~~~~~ss~~kgEsl~Dt~~~-ls~~~D~iviR~~~~--~~~~~~ 116 (306)
-|||+++...-+ ..-.-+++.++++.|.+++.+.... ..|.-.+.+.. .+..+|++++-.... ..+..+
T Consensus 16 s~tIGvivp~l~~~f~~~l~~~i~~~~~~~gy~~~l~~~~~----~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~l 91 (289)
T 2fep_A 16 TTTVGVIIPDISSIFYSELARGIEDIATMYKYNIILSNSDQ----NMEKELHLLNTMLGKQVDGIVFMGGNITDEHVAEF 91 (289)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHHHHHHHHTTCEEEEEECTT----CHHHHHHHHHHHHHTTCSEEEECCSCCCHHHHHHH
T ss_pred HCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCC----CHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHH
T ss_conf 59999996878898999999999999998699899996899----97999999999996398747996315887999999
Q ss_pred HCCCCCCEECC
Q ss_conf 30124412404
Q gi|255764473|r 117 TEYATVPVINA 127 (306)
Q Consensus 117 ~~~~~vpvINa 127 (306)
. ...+||+.-
T Consensus 92 ~-~~~~~vv~~ 101 (289)
T 2fep_A 92 K-RSPVPIVLA 101 (289)
T ss_dssp H-HSSSCEEEE
T ss_pred H-HCCCCEEEE
T ss_conf 8-649978996
Done!