RPSBLAST alignment for GI: 255764473 and conserved domain: TIGR00658

>gnl|CDD|129743 TIGR00658, orni_carb_tr, ornithine carbamoyltransferase. Most OTCases are homotrimers, but the homotrimers are organized into dodecamers built from four trimers in at least two species; the catabolic OTCase of Pseudomonas aeruginosa is allosterically regulated, while OTCase of the extreme thermophile Pyrococcus furiosus shows both allostery and thermophily. Length = 304

 Score =  389 bits (1002), Expect = e-109
 Identities = 152/304 (50%), Positives = 209/304 (68%), Gaps = 5/304 (1%)

Query: 6   KHFADLSNISSSNLSCIIEVAKKIKNSSENIFENKPLSGKVLAMIFEKPSTRTRVSFEVA 65
           +H   L ++S   +  ++++AKK+K   +   E+K L GK LA+IFEKPSTRTRVSFEVA
Sbjct: 1   RHLLSLLDLSPEEIRYLLQLAKKLKKGKKKGKEHKKLKGKTLALIFEKPSTRTRVSFEVA 60

Query: 66  MKHLGGDTIFLSGSEMQLGRAETIGDTAKVLSRYVDAIVMRTTNHSRLLELTEYATVPVI 125
              LGG  ++L+ +++QLGR E+I DTA+VLSRYVD I+ R   H  + EL +YA+VPVI
Sbjct: 61  AYQLGGHPLYLNPNDLQLGRGESIKDTARVLSRYVDGIMARVYKHEDVEELAKYASVPVI 120

Query: 126 NALTDNTHPCQIIADIMTFEEHRGSVKGKLFSWSGDGNNILHSLIEGAARFNYLLNIATP 185
           N LTD  HPCQ +AD++T  EH G +KG    + GDGNN+ +SL+   A+    + +ATP
Sbjct: 121 NGLTDLFHPCQALADLLTIIEHFGKLKGVKVVYVGDGNNVCNSLMLAGAKLGMDVVVATP 180

Query: 186 IGSEPRNEYLNWAR----NQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFKAREE-HV 240
            G EP  + +  A+      G SV L HD V+AVKGA  ++TD W+SM +E K  E   +
Sbjct: 181 EGYEPDADIVKKAQEIAKENGGSVELTHDPVEAVKGADVIYTDVWVSMGEEDKKEERLKL 240

Query: 241 FQPFQVNLSLMSMAHPDALFMHCLPAHRGEEVINEVLDGPQSVVFDEAENRLHTQKAILL 300
           F+P+QVN  LM +A P+ +FMHCLPAHRGEEV +EV++GP S+VFD+AENRLH QKA+++
Sbjct: 241 FRPYQVNEELMELAKPEVIFMHCLPAHRGEEVTDEVIEGPHSIVFDQAENRLHAQKAVMV 300

Query: 301 WCFG 304
              G
Sbjct: 301 ALLG 304