RPSBLAST alignment of GI: 255764473 and protein with PDBid: 3grf
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis} Length = 328
Score = 267 bits (684), Expect = 2e-72
Identities = 106/318 (33%), Positives = 159/318 (50%), Gaps = 21/318 (6%)
Query: 6 KHFADLSNISSSNLSCIIEVAKKIKNSSENIFENKPLSGKVLAMIFEKPSTRTRVSFEVA 65
+H +S + L+ +I+ A +K + + K L F KPS RTRVS E A
Sbjct: 8 RHLLTISALCPKELAYLIDRALDMKKNPAK--YTARAANKTLLAFFAKPSLRTRVSLETA 65
Query: 66 MKHLGGDTIFL-SGSEMQLGRAETIGDTAKVLSRYVDAIVMRTTNHSRLLELTEYATVPV 124
M LGG I+ G+ +G ET+ DTA+V SR VD R + E+ ++A+VP
Sbjct: 66 MTRLGGHAIYYELGANSNVGGKETVQDTAEVFSRMVDICTARLATKEMMREMAQHASVPC 125
Query: 125 INALTDNTHPCQIIADIMTFEEHRGSVKG--------KLFSWSGDGNNILHSLIEGAARF 176
INAL D HP Q++ D MT +E + K NN+ + L+ G A
Sbjct: 126 INALDDFGHPLQMVCDFMTIKEKFTAAGEFSNGFKGIKFAYCGDSMNNVTYDLMRGCALL 185
Query: 177 NYLLNIATPIGS--EPRNEYLNWAR------NQGASVALFHDAVQAVKGAHCVFTDTWIS 228
++ P +P E ++ G S+ +FHD + +G V+TD+W+S
Sbjct: 186 GMECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIKIFHDCKKGCEGVDVVYTDSWMS 245
Query: 229 MNQ--EFKAREEHVFQPFQVNLSLMSMAHPDALFMHCLPAHRGEEVINEVLDGPQSVVFD 286
+ E K V PFQV+ ++M++ ++FM+CLPA RGEE V+DGP+SV +D
Sbjct: 246 YHITKEQKEARLKVLTPFQVDDAVMAVTSKRSIFMNCLPATRGEEQTASVIDGPKSVCYD 305
Query: 287 EAENRLHTQKAILLWCFG 304
EA NRLH+ A+L +
Sbjct: 306 EAGNRLHSAMAVLDFFLH 323