255764474

 Score =  547 bits (1409), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 255/348 (73%), Positives = 300/348 (86%)

Query: 1   MDMNNIDVIAPNMKFRHTGVTSTVFGLCPIQRKLGQRLVVFGYCLPKNIPSIGISSLLTC 60
           +DM+NIDVI PN+K RH+GVTST+FGL PIQRK+GQRLVVFGY LPKNI SIGISSLL C
Sbjct: 20  IDMSNIDVITPNLKIRHSGVTSTIFGLYPIQRKIGQRLVVFGYFLPKNIASIGISSLLAC 79

Query: 61  WKKPIGQNSRIWHARRNNEMLLGVMMRDVLRMPLKLVFTSPSQRNHSRWTRYLISRMDEV 120
           W++PI Q +RIWHARR+NEMLLG++MRDVLRMPLKLVFT+  QR +S+W  +L SRMD V
Sbjct: 80  WRRPISQKNRIWHARRHNEMLLGIVMRDVLRMPLKLVFTTSKQRKNSKWGEFLTSRMDAV 139

Query: 121 ITTSQKSARFIERPSTVIMHGVDTERFRPTSNKQEARRHLKISEDAKLIGCFGRIRKLKG 180
           I TS+KSA     P+T+IMHGV+TERF PT+NK+EARR +++ E+AKLIGCFGRIRKLKG
Sbjct: 140 IATSKKSAYSTNCPNTIIMHGVNTERFHPTNNKKEARRKIQMPENAKLIGCFGRIRKLKG 199

Query: 181 TDLFVDCMINILPHHPGWTAVVVGKTTLKHYLFKKNLQRRIYANGLKKRILFIDEQSSIE 240
           TDLFVDCMIN+LPHHP W A++VG+TTLKH  FKKN+Q+RIY  GL+KRILFI+EQ  I+
Sbjct: 200 TDLFVDCMINLLPHHPEWIALIVGRTTLKHCRFKKNIQKRIYEAGLEKRILFINEQYLID 259

Query: 241 DWYRALNIFVAPPLYEGFGLTPLEAMASGIPVVASNTGVFSELLDPENAKAGVIVPPRNL 300
            WYRAL+IFV+P L EGFGLTPLEAMASG+PVVAS+ G F+ELLDPEN KAG+I PP +L
Sbjct: 260 SWYRALDIFVSPSLSEGFGLTPLEAMASGVPVVASDVGAFTELLDPENTKAGIIFPPGDL 319

Query: 301 HALEKAVLYFMNSKKIMSDTGNRGRERAVKHFSIVKEASDIGKVYDRL 348
           H +EKA+LYFM S  IMSDTGNRGRERAVKHFSI KEA  IG+VYD L
Sbjct: 320 HEMEKAILYFMKSDNIMSDTGNRGRERAVKHFSIEKEALKIGEVYDTL 367

Species: Candidatus Liberibacter solanacearum
Genus: Candidatus Liberibacter
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  386 bits (991), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 179/349 (51%), Positives = 242/349 (69%)

Query: 2   DMNNIDVIAPNMKFRHTGVTSTVFGLCPIQRKLGQRLVVFGYCLPKNIPSIGISSLLTCW 61
           D+ +I++IAPN K R +GVTST+  L P+QR LGQ++ V G  LPK++PS+    L+  W
Sbjct: 3   DIRDIEIIAPNFKRRLSGVTSTIIQLIPVQRNLGQKIAVLGSGLPKSLPSVRFRDLIHLW 62

Query: 62  KKPIGQNSRIWHARRNNEMLLGVMMRDVLRMPLKLVFTSPSQRNHSRWTRYLISRMDEVI 121
           +KP G+  R+WHARRN EML  +++RD+LRM +++VFTS SQR H+ W+++LISRMD VI
Sbjct: 63  QKPAGRRCRVWHARRNVEMLPAILLRDLLRMKIRIVFTSASQRRHTGWSKFLISRMDAVI 122

Query: 122 TTSQKSARFIERPSTVIMHGVDTERFRPTSNKQEARRHLKISEDAKLIGCFGRIRKLKGT 181
            TS K+A ++E PSTVI+HG+DT RFRP  +K  A+R L +    K  GCFGR+R  KGT
Sbjct: 123 ATSAKTAAYLEVPSTVILHGIDTHRFRPPVDKATAKRALDLDPSRKYAGCFGRVRHQKGT 182

Query: 182 DLFVDCMINILPHHPGWTAVVVGKTTLKHYLFKKNLQRRIYANGLKKRILFIDEQSSIED 241
           DLFVD MI +LP  P W A+V G+ T  H  F+  L+ R+   GL  RILF+ E ++I D
Sbjct: 183 DLFVDSMIALLPSRPEWGAIVAGRATGPHLAFEAELKDRVAKAGLADRILFVGEHTNIPD 242

Query: 242 WYRALNIFVAPPLYEGFGLTPLEAMASGIPVVASNTGVFSELLDPENAKAGVIVPPRNLH 301
           WYRAL++FVAP  +EGFGLTPLEAMASG+PVVAS+ G FSEL+     + G+I+P  NL 
Sbjct: 243 WYRALDLFVAPQRWEGFGLTPLEAMASGVPVVASDVGAFSELIAEGPHETGLIIPAGNLE 302

Query: 302 ALEKAVLYFMNSKKIMSDTGNRGRERAVKHFSIVKEASDIGKVYDRLLR 350
           A+      FM+    ++     G  RA ++F+I  EA  IG +YDRL+R
Sbjct: 303 AMVDGAAAFMDDLPRLAAAAANGLSRASRNFAIDGEAQAIGAIYDRLMR 351

Species: Sinorhizobium fredii
Genus: Sinorhizobium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  374 bits (960), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 170/350 (48%), Positives = 246/350 (70%)

Query: 1   MDMNNIDVIAPNMKFRHTGVTSTVFGLCPIQRKLGQRLVVFGYCLPKNIPSIGISSLLTC 60
           +D+ +++VIAPN K R +GVTST+  L P+QR LGQ++ V G  LPKN+PS+    L+  
Sbjct: 2   VDIRDVEVIAPNFKQRLSGVTSTIIQLVPVQRALGQKIAVLGPGLPKNLPSVRFRDLIHL 61

Query: 61  WKKPIGQNSRIWHARRNNEMLLGVMMRDVLRMPLKLVFTSPSQRNHSRWTRYLISRMDEV 120
           WK+P G++ R+WHARRN EML  +++RD+LRM +++VFTS SQR H+ W+++LI RMD V
Sbjct: 62  WKRPEGRSCRVWHARRNVEMLPAILLRDLLRMKIRIVFTSASQRRHTGWSKFLIRRMDAV 121

Query: 121 ITTSQKSARFIERPSTVIMHGVDTERFRPTSNKQEARRHLKISEDAKLIGCFGRIRKLKG 180
           I TS ++A +++ P+TVI+HG+DT+RF+P  +K EA++ L +    K +GCFGR+R  KG
Sbjct: 122 IATSGRTAAYLDVPNTVILHGIDTKRFQPPFDKTEAKKALGLDPAKKFVGCFGRVRHQKG 181

Query: 181 TDLFVDCMINILPHHPGWTAVVVGKTTLKHYLFKKNLQRRIYANGLKKRILFIDEQSSIE 240
           TDLFVD MI +LP  P W A+V G+ T  H  F+  L+ R+   GL  RILF+ E ++I 
Sbjct: 182 TDLFVDSMIALLPCRPDWGAIVAGRATGPHLAFESELKERVAKAGLADRILFVGEHANIP 241

Query: 241 DWYRALNIFVAPPLYEGFGLTPLEAMASGIPVVASNTGVFSELLDPENAKAGVIVPPRNL 300
           DWYRAL++FVAP  +EGFGLTPLEAMA+G+PVVA++ G FSEL+   + + G+I+   +L
Sbjct: 242 DWYRALDLFVAPQRWEGFGLTPLEAMATGVPVVATDVGAFSELVTGGSEETGLIIAADDL 301

Query: 301 HALEKAVLYFMNSKKIMSDTGNRGRERAVKHFSIVKEASDIGKVYDRLLR 350
            A+  A   FM+ +  ++     G  R  K+F+I +EA  I  VY+ L+R
Sbjct: 302 KAMVDAAAAFMDDRPRLAAASANGLARTSKNFAIEQEARAIAAVYESLMR 351

Species: Sinorhizobium meliloti
Genus: Sinorhizobium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  373 bits (957), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 174/350 (49%), Positives = 246/350 (70%)

Query: 1   MDMNNIDVIAPNMKFRHTGVTSTVFGLCPIQRKLGQRLVVFGYCLPKNIPSIGISSLLTC 60
           +D+ +++VIAPN K R +GVTS++  L P+QR LGQ++ V G  LPK++PS+    L+  
Sbjct: 2   VDIRDVEVIAPNFKRRLSGVTSSIIQLVPVQRALGQKIAVLGPGLPKSLPSVRFRDLIRL 61

Query: 61  WKKPIGQNSRIWHARRNNEMLLGVMMRDVLRMPLKLVFTSPSQRNHSRWTRYLISRMDEV 120
           WK+P G+  R+WHARRN EML  V++RD+LRM +++VFTS SQR H+ W+++LI RMD V
Sbjct: 62  WKRPPGRRCRVWHARRNVEMLPAVLLRDLLRMKIRIVFTSASQRRHTGWSKFLIGRMDAV 121

Query: 121 ITTSQKSARFIERPSTVIMHGVDTERFRPTSNKQEARRHLKISEDAKLIGCFGRIRKLKG 180
           I TS ++A ++E P+TVI+HG+DT+RF+P  +K EA++ L +    K +GCFGR+R+ KG
Sbjct: 122 IATSARTAAYLEVPNTVILHGIDTQRFQPPFDKAEAKQALGLDPAKKFVGCFGRVRRQKG 181

Query: 181 TDLFVDCMINILPHHPGWTAVVVGKTTLKHYLFKKNLQRRIYANGLKKRILFIDEQSSIE 240
           TDLFVD MI +LP  PGW A+V G+ T  H  F+  L+ R+   GL  RILF+ E ++I 
Sbjct: 182 TDLFVDSMIALLPGRPGWGAIVAGRATGPHAAFETELKERVAKAGLADRILFVGEHTNIP 241

Query: 241 DWYRALNIFVAPPLYEGFGLTPLEAMASGIPVVASNTGVFSELLDPENAKAGVIVPPRNL 300
           DWYRAL++F+AP  +EGFGLTPLEAMA+G+PVVA++ G FSEL+   N + G+IV   +L
Sbjct: 242 DWYRALDLFIAPQRWEGFGLTPLEAMATGVPVVATDVGAFSELVTVGNEETGLIVAADDL 301

Query: 301 HALEKAVLYFMNSKKIMSDTGNRGRERAVKHFSIVKEASDIGKVYDRLLR 350
            A+  A   +M+    ++  G  G  R  K+F+I  EA  IG VYD L R
Sbjct: 302 TAMVGAAAAYMDDLPRLAAAGANGLARTAKNFAIEGEARAIGAVYDSLTR 351

Species: Sinorhizobium medicae
Genus: Sinorhizobium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  371 bits (953), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 170/350 (48%), Positives = 245/350 (70%)

Query: 1   MDMNNIDVIAPNMKFRHTGVTSTVFGLCPIQRKLGQRLVVFGYCLPKNIPSIGISSLLTC 60
           +D+ +++VIAPN K R +GVTST+  L P+QR LGQ++ V G  LPK++PS+    L+  
Sbjct: 2   VDIRDVEVIAPNFKQRLSGVTSTIIQLVPVQRALGQKIAVLGPGLPKSLPSVRFRDLIHL 61

Query: 61  WKKPIGQNSRIWHARRNNEMLLGVMMRDVLRMPLKLVFTSPSQRNHSRWTRYLISRMDEV 120
           WK+P G+  R+WHARRN EML  +++RD+LRM L++VFTS SQR H+ W+++LI RMD V
Sbjct: 62  WKRPEGRPCRVWHARRNVEMLPAILLRDLLRMKLRIVFTSASQRRHTGWSKFLIRRMDAV 121

Query: 121 ITTSQKSARFIERPSTVIMHGVDTERFRPTSNKQEARRHLKISEDAKLIGCFGRIRKLKG 180
           I TS ++A +++ P+TVI+HG+DT+RF+P  +K EA++ L +    K +GCFGR+R  KG
Sbjct: 122 IATSGRTAAYLDVPNTVILHGIDTKRFQPPFDKTEAKKALGLDPAKKFVGCFGRVRHQKG 181

Query: 181 TDLFVDCMINILPHHPGWTAVVVGKTTLKHYLFKKNLQRRIYANGLKKRILFIDEQSSIE 240
           TDLFVD MI +LP  P W A+V G+ T  H  F+  L+ R+   GL  RILF+ E ++I 
Sbjct: 182 TDLFVDSMIALLPCRPDWGAIVAGRATGPHLAFESELKERVAKAGLADRILFVGEHTNIP 241

Query: 241 DWYRALNIFVAPPLYEGFGLTPLEAMASGIPVVASNTGVFSELLDPENAKAGVIVPPRNL 300
           DWYRAL++FVAP  +EGFGLTPLEAMA+G+PVVA++ G FSEL+   + + G+I+   +L
Sbjct: 242 DWYRALDLFVAPQRWEGFGLTPLEAMATGVPVVATDVGAFSELVTGGSEETGLIIAADDL 301

Query: 301 HALEKAVLYFMNSKKIMSDTGNRGRERAVKHFSIVKEASDIGKVYDRLLR 350
            A+  A   FM+ +  ++     G  R  K+F+I +EA  I  VY+ L+R
Sbjct: 302 KAMVDAAAAFMDDRPRLAAASANGLARTSKNFAIEQEARAIAAVYESLMR 351

Species: Sinorhizobium meliloti
Genus: Sinorhizobium
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  336 bits (861), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 167/350 (47%), Positives = 230/350 (65%), Gaps = 6/350 (1%)

Query: 1   MDMNNIDVIAPNMKFRHTGVTSTVFGLCPIQRKLGQRLVVFGYCLPKNIPSIGISSLLTC 60
           + +   D+I P+ K R +GVT+T+  L P+QRK G  +   G  LPKN+P++    L+  
Sbjct: 3   VSLKETDIIVPHFKKRLSGVTTTIIHLVPLQRKQGFYISTLGVGLPKNLPALSFKDLVGL 62

Query: 61  WKKPIGQNSRIWHARRNNEMLLGVMMRDVLRMPLKLVFTSPSQRNHSRWTRYLISRMDEV 120
           WK P+G++ RIWH RRN EML GV +RDVL+M LKL+FTS SQR+H  +T++LI RMD+V
Sbjct: 63  WKSPVGKSFRIWHTRRNIEMLCGVFLRDVLKMKLKLIFTSASQRHHKPFTKWLIRRMDKV 122

Query: 121 ITTSQKSARFIERPSTVIMHGVDTERFRPTSNKQEARRHLKISEDAKLIGCFGRIRKLKG 180
           I TS+++ R++E P  VI+HGVD ERF P     +      +S     IGCFGR+R LKG
Sbjct: 123 IATSERTGRYLEVPHQVILHGVDLERFSPPKTIDDCFSASGLSGKYA-IGCFGRVRYLKG 181

Query: 181 TDLFVDCMINILPHHPGWTAVVVGKTTLKHYLFKKNLQRRIYANGLKKRILFIDEQSSIE 240
           TDLFVD M+ +LP +P WTA++ G+TT KHY F+K L+++I   GL  RI+F+ E  +I 
Sbjct: 182 TDLFVDAMLELLPRYPDWTAIIAGRTTAKHYNFEKQLRQKIATAGLSDRIIFLGEIQNIP 241

Query: 241 DWYRALNIFVAPPLYEGFGLTPLEAMASGIPVVASNTGVFSELLDPENAKAGVIVPPRNL 300
            WYR L++++AP   EGFGLTPLEAMAS   VVASN G++ EL+  E   AG +VP  + 
Sbjct: 242 LWYRRLSLYIAPSRREGFGLTPLEAMASQTAVVASNAGMYEELITEE---AGTVVPAGDQ 298

Query: 301 HALEKAV-LYFMNSKKIMSDTGNRGRERAVKHFSIVKEASDIGKVYDRLL 349
            AL +A+ LYF + +K +  TG +       HF + KEA  IG VY  + 
Sbjct: 299 AALTEAIELYFSDLEKTIM-TGKKALTHVQTHFPLEKEARAIGHVYKEMF 347

Species: Bartonella rochalimae
Genus: Bartonella
Family: Bartonellaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  329 bits (843), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 165/348 (47%), Positives = 226/348 (64%), Gaps = 6/348 (1%)

Query: 3   MNNIDVIAPNMKFRHTGVTSTVFGLCPIQRKLGQRLVVFGYCLPKNIPSIGISSLLTCWK 62
           +   D+I P+ K R +GVT+T+  L P+QRK G  +   G  LPKN+P++  + L+  WK
Sbjct: 5   LKETDIIVPHFKKRLSGVTTTIIHLVPLQRKQGFYISTLGVGLPKNLPALSFTDLVGLWK 64

Query: 63  KPIGQNSRIWHARRNNEMLLGVMMRDVLRMPLKLVFTSPSQRNHSRWTRYLISRMDEVIT 122
            P+G++ RIWHARRN EML G+ +RDVL+M LKL+FTS SQR H  +T++LI RMD+VI 
Sbjct: 65  SPVGKSFRIWHARRNIEMLCGIFLRDVLKMKLKLIFTSASQRYHKPFTKWLIRRMDKVIA 124

Query: 123 TSQKSARFIERPSTVIMHGVDTERFRPTSNKQEARRHLKISEDAKLIGCFGRIRKLKGTD 182
           TS+++ R++E P  VI+HGVD ERF P     +      +S     IGCFGR+R LKGTD
Sbjct: 125 TSKRTGRYLEVPHQVILHGVDLERFSPPKTIDDCFSASGLSGKYA-IGCFGRVRYLKGTD 183

Query: 183 LFVDCMINILPHHPGWTAVVVGKTTLKHYLFKKNLQRRIYANGLKKRILFIDEQSSIEDW 242
           LFVD M+ +LP +P WTA++ G+TT KHY F+K L ++I   GL  RI+F+ E      W
Sbjct: 184 LFVDAMLELLPRYPDWTAIIAGRTTAKHYNFEKQLHQKIATAGLSDRIIFLGEIQDTPLW 243

Query: 243 YRALNIFVAPPLYEGFGLTPLEAMASGIPVVASNTGVFSELLDPENAKAGVIVPPRNLHA 302
           YR L+++VAP   EGFGLTPLEAMAS   VVASN G++ EL+  E    G +VP  +  A
Sbjct: 244 YRRLSLYVAPSRREGFGLTPLEAMASQTAVVASNAGMYEELITEET---GTVVPAGDQIA 300

Query: 303 LEKAV-LYFMNSKKIMSDTGNRGRERAVKHFSIVKEASDIGKVYDRLL 349
           L +A+ LYF + +K +  TG +       +F + KEA  IG VY  + 
Sbjct: 301 LTEAIELYFSDLEKTIM-TGKKALTHVKTNFPLEKEARAIGHVYKEIF 347

Species: Bartonella sp. 1-1C
Genus: Bartonella
Family: Bartonellaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  327 bits (837), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 167/349 (47%), Positives = 224/349 (64%), Gaps = 8/349 (2%)

Query: 3   MNNIDVIAPNMKFRHTGVTSTVFGLCPIQRKLGQRLVVFGYCLPKNIPSIGISSLLTCWK 62
           +   D+I P+ K R +GVT+T+  L P+QRK G  +   G  LPKN+P++    L   WK
Sbjct: 5   LKETDIIVPHFKKRLSGVTTTIIHLVPLQRKQGIYISTLGIGLPKNLPALSFKDLFGLWK 64

Query: 63  KPIGQNSRIWHARRNNEMLLGVMMRDVLRMPLKLVFTSPSQRNHSRWTRYLISRMDEVIT 122
            P+G++ RIWHARRN EML G+ +RDVL+M LKL+FTS SQR H  +T++LI RMD+VI 
Sbjct: 65  SPVGKSFRIWHARRNIEMLCGIFLRDVLKMKLKLIFTSASQRYHKPFTKWLIRRMDKVIA 124

Query: 123 TSQKSARFIERPSTVIMHGVDTERFRPTSNKQEARRHLKISEDAKLIGCFGRIRKLKGTD 182
           TS+++ +++E P  VIMHGVD ERF P     +      +S     IGCFGRIR LKGTD
Sbjct: 125 TSERTGKYLEVPHKVIMHGVDLERFSPPKTIDDCFSASGLSGQYA-IGCFGRIRYLKGTD 183

Query: 183 LFVDCMINILPHHPGWTAVVVGKTTLKHYLFKKNLQRRIYANGLKKRILFIDEQSSIEDW 242
           LFVD M+ +LP +P WTA++ G+TT+KHY F+K L+R+I   GL  RI+F+ E      W
Sbjct: 184 LFVDAMLKLLPRYPDWTAIIAGRTTVKHYNFEKQLRRKIATAGLSDRIIFLGEIQDTPLW 243

Query: 243 YRALNIFVAPPLYEGFGLTPLEAMASGIPVVASNTGVFSELLDPENAKAGVIVPPRNLHA 302
           YR L+++VAP   EGFGLTPLEAMAS   VVASN G++ EL+       G +V   +  A
Sbjct: 244 YRRLSLYVAPSRREGFGLTPLEAMASQTAVVASNAGMYEELI---REGTGTVVSAGDRVA 300

Query: 303 LEKAV-LYFMN-SKKIMSDTGNRGRERAVKHFSIVKEASDIGKVYDRLL 349
           L +A+ LYF +  K IM+  G +       HF + KEA  IG VY  + 
Sbjct: 301 LTEAIELYFSDLEKTIMA--GKKALTYVQTHFPLEKEAIAIGHVYKEMF 347

Species: Bartonella sp. AR 15-3
Genus: Bartonella
Family: Bartonellaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  323 bits (827), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 163/349 (46%), Positives = 222/349 (63%), Gaps = 4/349 (1%)

Query: 1   MDMNNIDVIAPNMKFRHTGVTSTVFGLCPIQRKLGQRLVVFGYCLPKNIPSIGISSLLTC 60
           + +   D+I P+ K R +GVT+TV  L P+QRK G  +   G  LPKN+P++    L   
Sbjct: 3   VSLKKTDIIVPHFKKRLSGVTTTVIHLVPLQRKQGIYISTLGVGLPKNLPALSFKDLFGL 62

Query: 61  WKKPIGQNSRIWHARRNNEMLLGVMMRDVLRMPLKLVFTSPSQRNHSRWTRYLISRMDEV 120
           WK PIG++ RIWHARRN EML GV +RDVL+M LKL+FTS SQR+H  +T++LI RMD+V
Sbjct: 63  WKSPIGKSFRIWHARRNIEMLCGVFLRDVLKMKLKLIFTSASQRHHKPFTKWLIRRMDKV 122

Query: 121 ITTSQKSARFIERPSTVIMHGVDTERFRPTSNKQEARRHLKISEDAKLIGCFGRIRKLKG 180
           I TS+++  ++E P  VIMHGVD ERF P     +      +      +GCFGR+R LKG
Sbjct: 123 IATSKRTGGYLEVPHQVIMHGVDLERFSPPKTVNDCFSASGLPGKYA-VGCFGRLRYLKG 181

Query: 181 TDLFVDCMINILPHHPGWTAVVVGKTTLKHYLFKKNLQRRIYANGLKKRILFIDEQSSIE 240
           TDLFVD M+ +LP++P WTA++ G+TT+K+Y F+K L+++I   GL  RI+F+ E   I 
Sbjct: 182 TDLFVDAMLELLPNYPDWTAIIAGRTTVKYYHFEKQLRQKIATAGLSDRIIFLGEIQDIP 241

Query: 241 DWYRALNIFVAPPLYEGFGLTPLEAMASGIPVVASNTGVFSELLDPENAKAGVIVPPRNL 300
            WYR L+++VAP   EGFGLTPLEAMAS   VVASN G++ EL+     K  V+     +
Sbjct: 242 LWYRRLSLYVAPSRIEGFGLTPLEAMASQTAVVASNAGMYEELVTEGTGK--VVSAGDRV 299

Query: 301 HALEKAVLYFMNSKKIMSDTGNRGRERAVKHFSIVKEASDIGKVYDRLL 349
             +E   LYF + KK +   G +       HF + KEA  IG VY  + 
Sbjct: 300 ALIEAIELYFSDLKKTII-AGKKALTHVRTHFPLEKEAVAIGHVYKEMF 347

Species: Bartonella clarridgeiae
Genus: Bartonella
Family: Bartonellaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  317 bits (812), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 159/350 (45%), Positives = 221/350 (63%), Gaps = 6/350 (1%)

Query: 1   MDMNNIDVIAPNMKFRHTGVTSTVFGLCPIQRKLGQRLVVFGYCLPKNIPSIGISSLLTC 60
           + +   D+I P+ K R +GVTST+  L P+QRK G R+   G+ LP+++P++    L   
Sbjct: 3   VSLKETDIIVPHFKKRMSGVTSTIIQLIPLQRKQGIRISTLGWGLPQSLPALSFRDLFGL 62

Query: 61  WKKPIGQNSRIWHARRNNEMLLGVMMRDVLRMPLKLVFTSPSQRNHSRWTRYLISRMDEV 120
           WK P+ +  RIWHARRN EML G+  RDVLRM LKL+FTS SQR H  +T++LI RMD+V
Sbjct: 63  WKNPVSKPFRIWHARRNIEMLCGIFFRDVLRMKLKLIFTSASQRQHKPFTKWLIRRMDKV 122

Query: 121 ITTSQKSARFIERPSTVIMHGVDTERFRPTSNKQEARRHLKISEDAKLIGCFGRIRKLKG 180
           I TS ++  ++E P  VIMHGVD ERF P     +      +      +GCFGR+R LKG
Sbjct: 123 IATSARTGTYLEVPYQVIMHGVDLERFLPPKTVSDCFVATGLPGKYA-VGCFGRVRYLKG 181

Query: 181 TDLFVDCMINILPHHPGWTAVVVGKTTLKHYLFKKNLQRRIYANGLKKRILFIDEQSSIE 240
           TDLFVD M+ +LPH+P WTA++ G+TT +HY F+K L+++I   GL  RI+ + E   I 
Sbjct: 182 TDLFVDAMLKLLPHYPDWTAIIAGRTTTQHYNFEKKLRQKIAHAGLNDRIIILGEVLDIA 241

Query: 241 DWYRALNIFVAPPLYEGFGLTPLEAMASGIPVVASNTGVFSELLDPENAKAGVIVPPRNL 300
            WYR L+++VAP   EGFGLTPLEAMAS   VV S+ GV+ EL+       G +V   + 
Sbjct: 242 LWYRRLSLYVAPSRAEGFGLTPLEAMASQTAVVTSDAGVYEELV---VEGTGTVVKAGDG 298

Query: 301 HALEKAVL-YFMNSKKIMSDTGNRGRERAVKHFSIVKEASDIGKVYDRLL 349
            AL  A+  YF + +K ++ TG +       HF + +EA+ IG VY+ + 
Sbjct: 299 LALTAAIEPYFADLEKTLA-TGKKALTHVCTHFPLEREAAAIGSVYEMMF 347

Species: Bartonella schoenbuchensis
Genus: Bartonella
Family: Bartonellaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria

 Score =  163 bits (415), Expect = 6e-41
 Identities = 82/260 (31%), Positives = 123/260 (47%), Gaps = 19/260 (7%)

Query: 97  VFTSPSQRNHSRWTRYLISRMDEVITTSQKSARFIER------PSTVIMHGVDTERFRPT 150
           V   P +R      R  + R D VI  S+  A  ++         TVI +GVDTERF P 
Sbjct: 129 VNLLPRKRLLRALLRRALRRADAVIAVSEALADELKALGIDPEKVTVIPNGVDTERFSP- 187

Query: 151 SNKQEARRHLKISEDAKLIGCFGRIRKLKGTDLFVDCMINILPHHPGWTAVVVGKTTLKH 210
              +   R L + ED K+I   GR+   KG D  ++ +  +L   P    V+VG   L+ 
Sbjct: 188 -ADRAEARKLGLPEDKKVILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGPLR- 245

Query: 211 YLFKKNLQRRIYANGLKKRILFIDEQSSIE--DWYRALNIFVAPPLYEGFGLTPLEAMAS 268
               + L+      GL+ R+ F+      E   +Y A ++FV P L EGFGL  LEAMA 
Sbjct: 246 ----EALEALAAELGLEDRVTFLGAVPHEEVPAYYAAADVFVLPSLREGFGLVLLEAMAC 301

Query: 269 GIPVVASNTGVFSELLDPENAKAGVIVPPRNLHALEKAVLYFMNSKKIMSDTGNRGRERA 328
           G+PVVA++ G   E++     + G++VPP +  AL +A+L  +         G   R R 
Sbjct: 302 GLPVVATDVGGIPEIITDG--ENGLLVPPGDPEALAEAILRLLADPW--LRLGRAARRRV 357

Query: 329 VKHFSIVKEASDIGKVYDRL 348
            + FS    A  + ++Y  +
Sbjct: 358 AERFSWENVAERLLELYREV 377

wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.. Length = 377

 Score =  150 bits (382), Expect = 4e-37
 Identities = 70/244 (28%), Positives = 112/244 (45%), Gaps = 17/244 (6%)

Query: 111 RYLISRMDEVITTSQKSARFIE------RPSTVIMHGVDTERFRPTSNKQEA-RRHLKIS 163
           R L S +  ++  S  +A + +      +   VI +GVDTERF P  + +   R  L + 
Sbjct: 131 RLLSSFIPLIVANSAAAAEYHQAIGYPPKKIVVIPNGVDTERFSPDLDARARLREELGLP 190

Query: 164 EDAKLIGCFGRIRKLKGTDLFVDCMINILPHHPGWTAVVVGKTTLKHYLFKKNLQRRIY- 222
           ED  LIG   R+   K     +     +L   P    ++VG    +      NL+     
Sbjct: 191 EDTFLIGIVARLHPQKDHATLLRAAALLLKKFPNARLLLVGDGPDR-----ANLELLALK 245

Query: 223 ANGLKKRILFIDEQSSIEDWYRALNIFVAPPLYEGFGLTPLEAMASGIPVVASNTGVFSE 282
             GL+ +++ + E+S +     AL++FV   L EGF    LEAMA G+PVVA++ G  +E
Sbjct: 246 ELGLEDKVILLGERSDVPALLNALDVFVLSSLSEGFPNVLLEAMACGLPVVATDVGDNAE 305

Query: 283 LLDPENAKAGVIVPPRNLHALEKAVLYFMNSKKIMSDTGNRGRERAVKHFSIVKEASDIG 342
           L+       G +VPP +  AL +A+   +    +    G   RER  ++FSI        
Sbjct: 306 LVGD----TGFLVPPGDPEALAEAIEALLADPALRQALGEAARERIEENFSIEAMVEAYE 361

Query: 343 KVYD 346
           ++Y 
Sbjct: 362 ELYR 365

WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.. Length = 365

 Score =  126 bits (318), Expect = 1e-29
 Identities = 61/249 (24%), Positives = 105/249 (42%), Gaps = 31/249 (12%)

Query: 111 RYLISRMDEVITTSQ------KSARFIERPSTVIMH--GVDTERFRPTSNKQEARRHLKI 162
           R  +   D+VI  ++           I++  TV++   GVD +RF P+           I
Sbjct: 133 RLALRFTDKVIFQNEDDRDLALKLGIIKKKKTVLIPGSGVDLDRFSPSPEP--------I 184

Query: 163 SEDAKLIGCFGRIRKLKGTDLFVDCMINILPHHPGWTAVVVGKTTLKHYLFKKNLQRRIY 222
            ED  +     R+ K KG D  ++    +    P    ++VG    ++      +++   
Sbjct: 185 PEDDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGDEENPAAILEIEKL-- 242

Query: 223 ANGLKKRILFIDEQSSIEDWYRALNIFVAPPLYEGFGLTPLEAMASGIPVVASNTGVFSE 282
             GL+ R+ F+  +  + +   A ++FV P   EG     LEAMA G PV+A++     E
Sbjct: 243 --GLEGRVEFLGFRDDVPELLAAADVFVLPSYREGLPRVLLEAMAMGRPVIATDVPGCRE 300

Query: 283 LLDP-ENAKAGVIVPPRNLHALEKAVLYFMNSKKIMSDTGNRGRERAVKHFSIVKEASDI 341
            +    N   G +VPP +  AL  A+   +   ++ +  G   R+RA + F       D 
Sbjct: 301 AVIDGVN---GFLVPPGDAEALADAIERLIEDPELRARMGQAARKRAEEEF-------DE 350

Query: 342 GKVYDRLLR 350
             V  +LL 
Sbjct: 351 EIVVKKLLE 359

cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.. Length = 359

 Score =  124 bits (314), Expect = 3e-29
 Identities = 62/231 (26%), Positives = 94/231 (40%), Gaps = 12/231 (5%)

Query: 113 LISRMDEVITTS------QKSARFIERPSTVIMH-GVDTERFRPTSNKQEARRHLKISED 165
           L+   D VI ++        S          ++  GVD ERF P    +  R  L    D
Sbjct: 160 LLRAADRVIASTPQEAEELYSLYGAYPRRIRVVPPGVDLERFTPYGRAEARRARLLRDPD 219

Query: 166 AKLIGCFGRIRKLKGTDLFVDCMINILPHHPGWTAVVVGKTTLKHYLFKKNLQRRI-YAN 224
              I   GR+   KG D  +     +         V+VG          +   R +    
Sbjct: 220 KPRILAVGRLDPRKGIDTLIRAYAELPELRERANLVIVGGPRDDILAMDEEELRELAREL 279

Query: 225 GLKKRILF--IDEQSSIEDWYRALNIFVAPPLYEGFGLTPLEAMASGIPVVASNTGVFSE 282
           G+  R+ F     +  +   YRA ++FV P LYE FGLT LEAMA G+PVVA+  G   +
Sbjct: 280 GVIDRVDFPGRVSREDLPALYRAADVFVNPALYEPFGLTALEAMACGLPVVATAVGGPRD 339

Query: 283 LLDPENAKAGVIVPPRNLHALEKAVLYFMNSKKIMSDTGNRGRERAVKHFS 333
           ++   +   G++V PR+  AL  A+   +    +       G  RA   ++
Sbjct: 340 IV--VDGVTGLLVDPRDPEALAAALRRLLTDPALRRRLSRAGLRRARARYT 388

The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.. Length = 398

 Score =  123 bits (312), Expect = 5e-29
 Identities = 60/231 (25%), Positives = 97/231 (41%), Gaps = 15/231 (6%)

Query: 120 VITTSQKSARFIER-----PSTVIMHGVDTERFRPTSNKQEARRHLKISEDAKLIGCFGR 174
           V  TS++ A  I R     P  VI +GVD   F    ++   RR   I  D ++I   GR
Sbjct: 153 VHATSEQEAAEIRRLGLKAPIAVIPNGVDIPPFAALPSRGR-RRKFPILPDKRIILFLGR 211

Query: 175 IRKLKGTDLFVDCMINILPHHPGWTAVVVGKTTLKHYLFKKNLQRRIYANGLKKRILFID 234
           +   KG DL ++    +    P W  V+ G     +      L++   A GL+ R+ F  
Sbjct: 212 LHPKKGLDLLIEAFAKLAERFPDWHLVIAGPDEGGYRAE---LKQIAAALGLEDRVTFTG 268

Query: 235 EQSSIEDW--YRALNIFVAPPLYEGFGLTPLEAMASGIPVVASNTGVFSELLDPENAKAG 292
                +        ++FV P   E FG+   EA+A G PVV ++   + EL++      G
Sbjct: 269 MLYGEDKAAALADADLFVLPSHSENFGIVVAEALACGTPVVTTDKVPWQELIE---YGCG 325

Query: 293 VIVPPRNLHALEKAVLYFMNSKKIMSDTGNRGRERAVKHFSIVKEASDIGK 343
            +V   ++ AL  A+   +   + +   G  GR    + FS    A  + +
Sbjct: 326 WVVDD-DVDALAAALRRALELPQRLKAMGENGRALVEERFSWTAIAQQLLE 375

Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.. Length = 375

 Score =  121 bits (307), Expect = 2e-28
 Identities = 67/261 (25%), Positives = 104/261 (39%), Gaps = 36/261 (13%)

Query: 94  LKLVFTSPSQRNHSRWTRYLISRMDEVITTSQKSARFIERPSTVIMHGVDTERFRPTSNK 153
           L L   +PS     RW        D      + S+ F   P  VI +G+DT  FRP  +K
Sbjct: 135 LNLTIVAPS-----RWLA------DCA----RSSSLFKGIPIEVIPNGIDTTIFRP-RDK 178

Query: 154 QEARRHLKISEDAKLIGCFGRI---RKLKGTDLFVDCMINILPH--HPGWTAVVVGKTTL 208
           +EAR+ L +  D K+I  FG +      KG D  ++ +   L          VV G +  
Sbjct: 179 REARKRLGLPADKKII-LFGAVGGTDPRKGFDELIEAL-KRLAERWKDDIELVVFGASD- 235

Query: 209 KHYLFKKNLQRRIYANGLKKRIL-FIDEQSSIEDWYRALNIFVAPPLYEGFGLTPLEAMA 267
                                 L  +++  S+   Y A ++FV P L E F  T +EA+A
Sbjct: 236 ---------PEIPPDLPFPVHYLGSLNDDESLALIYSAADVFVVPSLQENFPNTAIEALA 286

Query: 268 SGIPVVASNTGVFSELLDPENAKAGVIVPPRNLHALEKAVLYFMNSKKIMSDTGNRGRER 327
            G PVVA + G   +++D      G +  P +   L + + + +       + G   RE 
Sbjct: 287 CGTPVVAFDVGGIPDIVDHG--VTGYLAKPGDPEDLAEGIEWLLADPDEREELGEAAREL 344

Query: 328 AVKHFSIVKEASDIGKVYDRL 348
           A   F    +A     +Y+ L
Sbjct: 345 AENEFDSRVQAKRYLSLYEEL 365

wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.. Length = 365

 Score =  105 bits (265), Expect = 1e-23
 Identities = 69/245 (28%), Positives = 95/245 (38%), Gaps = 20/245 (8%)

Query: 98  FTSPSQRNHSRWTRYLISRMDEVITTSQKSAR-------FIERPSTVIMHGVDTERFRPT 150
           F+   +R   R  R  + R D +IT S+ + R              VI  GVD     P 
Sbjct: 122 FSPGFRRYFRRLLRRALRRADAIITVSEATKRDLLRYLGVPPDKIVVIPLGVDPRFRPPP 181

Query: 151 SNKQEARRHLKISEDAKLIGCFGRIRKLKGTDLFVDCMINILPHHPGWTAVVVGKTTLKH 210
           +  +  R    +          G I   K  +  ++    +    P    V+VGK    +
Sbjct: 182 AEAEVLRALYLL--PRPYFLYVGTIEPRKNLERLLEAFARLPAKGPDPKLVIVGKRGWLN 239

Query: 211 YLFKKNLQRRIYANGLKKRILFIDEQSSIE--DWYRALNIFVAPPLYEGFGLTPLEAMAS 268
                 L  R+   GL  R+ F+   S  E    YR    FV P LYEGFGL  LEAMA 
Sbjct: 240 E----ELLARLRELGLGDRVRFLGYVSDEELAALYRGARAFVFPSLYEGFGLPVLEAMAC 295

Query: 269 GIPVVASNTGVFSELLDPENAKAGVIVPPRNLHALEKAVLYFMNSKKIMSDTGNRGRERA 328
           G PV+ASN     E+       A +   P +  AL  A+   +    +  +   RG  RA
Sbjct: 296 GTPVIASNISSLPEVAGD----AALYFDPLDPEALAAAIERLLEDPALREELRERGLARA 351

Query: 329 VKHFS 333
            K FS
Sbjct: 352 -KRFS 355

mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.. Length = 365

 Score =  100 bits (252), Expect = 5e-22
 Identities = 80/298 (26%), Positives = 124/298 (41%), Gaps = 44/298 (14%)

Query: 79  EMLLGVMMRDVLR-MPLKLVFT---------------SPSQRNHSRW--TRYLISRMDEV 120
              LG++   V R + + +V T                   R   R   +R   +R D V
Sbjct: 93  PFSLGLLGLRVARKLGIPVVATYHTMYEDYTHYVPLGRLLARAVVRRKLSRRFYNRCDAV 152

Query: 121 ITTSQKSARFIER-----PSTVIMHGVDTERFRPTSNKQEARRHLKISEDAKLIGCFGRI 175
           I  S+K A  +       P  VI  G+D +RF P     E RR L I ED  ++   GR+
Sbjct: 153 IAPSEKIADLLREYGVKRPIEVIPTGIDLDRFEPVDGDDE-RRKLGIPEDEPVLLYVGRL 211

Query: 176 RKLKGTDLFVDCMINILPHHPGWTAVVVGKTTLKHYLFKKNLQRRIYANGLKKRILFIDE 235
            K K  D  +     +L   P    V+VG    +     + L+      GL  R++F   
Sbjct: 212 AKEKNIDFLIRAFARLLKEEPDVKLVIVGDGPER-----EELEELARELGLADRVIFTGF 266

Query: 236 QSSIE--DWYRALNIFVAPPLYEGFGLTPLEAMASGIPVVASNTGVFSELL-DPENAKAG 292
               E  D+Y+A ++FV     E  GL  LEAMA+G+PVVA +     +L+ D EN   G
Sbjct: 267 VPREELPDYYKAADLFVFASTTETQGLVLLEAMAAGLPVVAVDAPGLPDLVADGEN---G 323

Query: 293 VIVPPRNLHALEKAVLYFMN--SKKIMSDTGNRGRERAVKHFSIVKEASDIGKVYDRL 348
            + PP +    E  +    +   ++ +S       E + + FS  K    + K+Y+ +
Sbjct: 324 FLFPPGDEALAEALLRLLQDPELRRRLSKNA----EESAEKFSFAK---KVEKLYEEV 374

UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.. Length = 374

 Score = 99.6 bits (249), Expect = 1e-21
 Identities = 63/239 (26%), Positives = 99/239 (41%), Gaps = 23/239 (9%)

Query: 100 SPSQRNHSRWTRYLISRMDEVITTS-----QKSARFIERPSTVIMHGVDTERFRPTSNKQ 154
            P       + R+  +R D V+  S     +  AR   R   +   GVDTE F P   + 
Sbjct: 128 GPLSWLAWAYLRWFHNRADRVLVPSPSLADELRARGFRRVR-LWPRGVDTELFHP-RRRD 185

Query: 155 EARRHLKISEDAKLIGCFGRIRKLKGTDLFVDCMINILPHHPGWTAVVVGKTTLKHYLFK 214
           EA R      D  ++   GR+   K  +  +D  +  L   P    V+VG    +     
Sbjct: 186 EALRARLGPPDRPVLLYVGRLAPEKNLEALLDADLP-LRRRPPVRLVIVGDGPAR----- 239

Query: 215 KNLQRRIYANGLKKRILFIDEQSSIE--DWYRALNIFVAPPLYEGFGLTPLEAMASGIPV 272
             L+ R Y N     + F+      E    Y + ++FV P   E FGL  LEAMASG+PV
Sbjct: 240 ARLEAR-YPN-----VHFLGFLDGEELAAAYASADVFVFPSRTETFGLVVLEAMASGLPV 293

Query: 273 VASNTGVFSELLDPENAKAGVIVPPRNLHALEKAVLYFMNSKKIMSDTGNRGRERAVKH 331
           VA + G  ++++     + G++V P +  A   A+   +   ++      R R  A + 
Sbjct: 294 VAPDAGGPADIVTDG--ENGLLVEPGDAEAFAAALAALLADPELRRRMAARARAEAERR 350

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes.. Length = 364

 Score = 99.3 bits (248), Expect = 1e-21
 Identities = 62/244 (25%), Positives = 103/244 (42%), Gaps = 22/244 (9%)

Query: 102 SQRNHSRWTRYLISRMDEVITTSQKSARFIER-------PSTVIMHGVDTERFRPTSNKQ 154
            +       R L  R D+++  S+     + +          VI + +D E  R  + + 
Sbjct: 121 RKLRLLLLIRKLYRRADKIVAVSEGVKEDLLKLLGIPPDKIEVIYNPIDIEEIRALAEEP 180

Query: 155 EARRHLKISEDAKLIGCFGRIRKLKGTDLFVDCMINILPHHPGWTAVVVGKTTLKHYLFK 214
                L I  D  +I   GR+   KG D  +     +    P    V++G   L+     
Sbjct: 181 ---LELGIPPDGPVILAVGRLSPQKGFDTLIRAFALLRKEGPDARLVILGDGPLR----- 232

Query: 215 KNLQRRIYANGLKKRILFIDEQSSIEDWYRALNIFVAPPLYEGFGLTPLEAMASGIPVVA 274
           + L+      GL  R+ F+  QS+   + +A ++FV    YEGF    LEAMA G PVVA
Sbjct: 233 EELEALAKELGLADRVHFLGFQSNPYPYLKAADLFVLSSRYEGFPNVLLEAMALGTPVVA 292

Query: 275 SN-TGVFSELLDPENAKAGVIVPPRN---LHALEKAVLYFMNSKKIMSDTGNRGRERAVK 330
           ++  G   E+L  E+ + G++VP  +   L A   A+L  +   ++        RER  +
Sbjct: 293 TDCPGP-REIL--EDGENGLLVPVGDEAALAAAALALLDLLLDPELRERLAAAARERVAR 349

Query: 331 HFSI 334
            +S 
Sbjct: 350 EYSK 353

WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.. Length = 353

 Score = 89.6 bits (223), Expect = 1e-18
 Identities = 66/244 (27%), Positives = 110/244 (45%), Gaps = 28/244 (11%)

Query: 108 RWTR--YLISRM-----DEVITTSQKSARF-IE---RPST--VIMHGVDTERFRPTSNKQ 154
            W R    + R+     D + T  + +    IE    P    VI +G+D ERF P     
Sbjct: 229 LWIRFFESLGRLAYQAADRITTLYEGNRERQIEDGADPEKIRVIPNGIDPERFAPAR--- 285

Query: 155 EARRHLKISEDAKLIGCFGRIRKLKGTDLFVDCMINILPHHPGWTAVVVGKTT-LKHYLF 213
              R  K      ++G  GR+  +K    F+     +    P     V+G T     Y  
Sbjct: 286 -RARPEKE---PPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAEGWVIGPTDEDPEYA- 340

Query: 214 KKNLQRRIYANGLKKRILFIDEQSSIEDWYRALNIFVAPPLYEGFGLTPLEAMASGIPVV 273
            +  +  + + GL+  + F   Q+ ++++   L++ V   + EG  L  LEAMA+GIPVV
Sbjct: 341 -EECRELVESLGLEDNVKFTGFQN-VKEYLPKLDVLVLTSISEGQPLVILEAMAAGIPVV 398

Query: 274 ASNTGVFSELL---DPEN-AKAGVIVPPRNLHALEKAVLYFMNSKKIMSDTGNRGRERAV 329
           A++ G   EL+   D E    AG +VPP +  AL +A+L  +   ++    G  GR+R  
Sbjct: 399 ATDVGSCRELIEGADDEALGPAGEVVPPADPEALARAILRLLKDPELRRAMGEAGRKRVE 458

Query: 330 KHFS 333
           ++++
Sbjct: 459 RYYT 462

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes.. Length = 475

 Score = 85.3 bits (212), Expect = 2e-17
 Identities = 61/243 (25%), Positives = 109/243 (44%), Gaps = 30/243 (12%)

Query: 111 RYLISRMDEVITTSQKSARFIER-------PSTVIMHGVDTERFRPTSNKQEARRHLKIS 163
              ++R D V+  S+ + + + R          V+  GVD ERF P          L+I 
Sbjct: 125 DEKLARADFVVAISEYNRQQLIRLLGCDPDKIHVVHCGVDLERFPPRPPPP-PGEPLRI- 182

Query: 164 EDAKLIGCFGRIRKLKGTDLFVDCMINILPHHPGWTAVVVGKTTLKHYLFKKNLQRRIYA 223
                    GR+ + KG D  ++ +  +      +   +VG   L+       L+  I  
Sbjct: 183 ------LSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGPLR-----DELEALIAE 231

Query: 224 NGLKKRILFIDEQSSIE--DWYRALNIFVAPPL------YEGFGLTPLEAMASGIPVVAS 275
            GL+ R+  +  +S  E  +  RA ++FV P +       EG  +  +EAMA G+PV+++
Sbjct: 232 LGLEDRVTLLGAKSQEEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVIST 291

Query: 276 NTGVFSELLDPENAKAGVIVPPRNLHALEKAVLYFMNSKKIMSDTGNRGRERAVKHFSIV 335
           +     EL++    + G++VPP +  AL  A+   ++  ++  + G  GR R  + F I 
Sbjct: 292 DVSGIPELVEDG--ETGLLVPPGDPEALADAIERLLDDPELRREMGEAGRARVEEEFDIR 349

Query: 336 KEA 338
           K+A
Sbjct: 350 KQA 352

amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.. Length = 355

 Score = 83.1 bits (206), Expect = 1e-16
 Identities = 67/250 (26%), Positives = 108/250 (43%), Gaps = 25/250 (10%)

Query: 110 TRYLISRMDEVITTSQKSAR-----F-IERPSTVIMHGVDTERFRPTSNKQEARRHLKIS 163
           TR+ I + D V   S+   +     F I +   VI + VD +RFRP  ++   RR     
Sbjct: 136 TRFSIEKSDGVTAVSESLRQETYELFDITKEIEVIPNFVDEDRFRPKPDEALKRRLG-AP 194

Query: 164 EDAKLIGCFGRIRKLKGTDLFVDCMINILPHHPGWTAVVVGKTTLKHYLF-----KKNLQ 218
           E  K++      R +K  D   D  I I        A V  +   +  L      +   +
Sbjct: 195 EGEKVLIHISNFRPVKRID---DV-IRIF-------AKVRKEVPARLLLVGDGPERSPAE 243

Query: 219 RRIYANGLKKRILFIDEQSSIEDWYRALNIFVAPPLYEGFGLTPLEAMASGIPVVASNTG 278
           R     GL+  +LF+ +Q  +E+     ++F+ P   E FGL  LEAMA G+PVVASN G
Sbjct: 244 RLARELGLQDDVLFLGKQDHVEELLSIADLFLLPSEKESFGLAALEAMACGVPVVASNAG 303

Query: 279 VFSELLDPENAKAGVIVPPRNLHALEKAVLYFMNSKKIMSDTGNRGRERAVKHFSIVKEA 338
              E++     + G +V   ++ A+ +  L  +   ++  +     R RA + F   +  
Sbjct: 304 GIPEVVKHG--ETGFLVDVGDVEAMAEYALSLLEDDELWQEFSRAARNRAAERFDSERIV 361

Query: 339 SDIGKVYDRL 348
                +Y RL
Sbjct: 362 PQYEALYRRL 371

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes.. Length = 371

 Score = 82.2 bits (204), Expect = 2e-16
 Identities = 57/235 (24%), Positives = 93/235 (39%), Gaps = 22/235 (9%)

Query: 110 TRYLISRMDEVITTSQKSARF------IERPSTVIMHGVDTERFRPTSNKQEARRHLKIS 163
            R  + R D ++ TS   A              VI  G+D  R+             + +
Sbjct: 131 QRRFLRRADAIVATSPNYAETSPVLRRFRDKVRVIPLGLDPARYPR--PDALEEAIWRRA 188

Query: 164 EDAKLIGCFGRIRKLKGTDLFVDCMINILPHHPGWTAVVVGKTTLKHYLFKKNLQRRIYA 223
                    GR+   KG    +D ++      P    V+VG+  L+  L     +    A
Sbjct: 189 AGRPFFLFVGRLVYYKG----LDVLLEAAAALPDAPLVIVGEGPLEAEL-----EALAAA 239

Query: 224 NGLKKRILFIDEQSSIEDW--YRALNIFVAP-PL-YEGFGLTPLEAMASGIPVVASNTGV 279
            GL  R+ F+      E      A ++FV P     E FG+  LEAMA G PV+++  G 
Sbjct: 240 LGLLDRVRFLGRLDDEEKAALLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGT 299

Query: 280 FSELLDPENAKAGVIVPPRNLHALEKAVLYFMNSKKIMSDTGNRGRERAVKHFSI 334
               ++  +   G++VPP +  AL +A+   +   ++    G   RERA + F+ 
Sbjct: 300 GGSYVN-LHGVTGLVVPPGDPAALAEAIRRLLEDPELRERLGEAARERAEEEFTA 353

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes.. Length = 357

 Score = 82.3 bits (204), Expect = 2e-16
 Identities = 62/240 (25%), Positives = 107/240 (44%), Gaps = 23/240 (9%)

Query: 107 SRWTRYLISRMDEVITTSQKSARFIERPS------TVIMHGVDTERFRPTSNKQEARRHL 160
            +  R +  R D ++  S     ++ R        +VI +GVD E F+P     E+ R  
Sbjct: 156 RKLERLIYRRADAIVVISPGMREYLVRRGVPPEKISVIPNGVDLELFKP-PPADESLRKE 214

Query: 161 KISEDAKLIGCFGRIRKLKGTDLFVDCMINILPHHPGWTAVVVGKTTLKHYLFKKNLQRR 220
              +D  ++   G I + +G D  ++    +L   P    ++VG         K+ L+  
Sbjct: 215 LGLDDKFVVLYAGNIGRAQGLDTLLEAA-ALLKDRPDIRFLIVGDGP-----EKEELKEL 268

Query: 221 IYANGLKKRILFIDEQS--SIEDWYRALNIFVAP--PLYEGFGLTP---LEAMASGIPVV 273
             A GL   + F+       + +   A ++ + P  P     G++P    E MA+G PV+
Sbjct: 269 AKALGLD-NVTFLGRVPKEELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVL 327

Query: 274 ASNTGVFSELLDPENAKAGVIVPPRNLHALEKAVLYFMNSKKIMSDTGNRGRERAVKHFS 333
           AS  G  +EL+  E A AG++VPP +  AL  A+L  ++  +  ++ G  GR    + FS
Sbjct: 328 ASVDGESAELV--EEAGAGLVVPPGDPEALAAAILELLDDPEERAEMGENGRRYVEEKFS 385

wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.. Length = 394

 Score = 69.9 bits (172), Expect = 9e-13
 Identities = 66/238 (27%), Positives = 96/238 (40%), Gaps = 48/238 (20%)

Query: 106 HSRWTRYLISRMDEVITTSQKSARFIE----RPSTVIMHGVDTERFRPTSNKQEARRHLK 161
              W R   +R+D  I  S+  AR I+    R +TVI   VDT+RF P   K        
Sbjct: 143 LRIWDRRSAARVDYFIANSRFVARRIKKYYGRDATVIYPPVDTDRFTPAEEK-------- 194

Query: 162 ISEDAKLIGCFGRIRKLKGTDLFVDCMINILPHHPGWTAVVVGKTTLKHYLFKKNLQRRI 221
             ED  L    GR+   K  DL ++    +     G   VV+G          + L+   
Sbjct: 195 --EDYYL--SVGRLVPYKRIDLAIEAFNKL-----GKRLVVIGD----GPELDR-LRA-- 238

Query: 222 YANGLKKRILFIDEQSS--IEDWY---RALNIFVAPPLYEGFGLTPLEAMASGIPVVASN 276
                   + F+   S   + D Y   RA  +F A    E FG+ P+EAMASG PV+A  
Sbjct: 239 ---KAGPNVTFLGRVSDEELRDLYARARAF-LFPA---EEDFGIVPVEAMASGTPVIAYG 291

Query: 277 TGVFSE-LLDPENAKAGVIVPPRNLHALEKAVLYFMNSKKIMSDTGNRGRERAVKHFS 333
            G   E ++D      G++   + + +L  AV  F  ++          R  A + FS
Sbjct: 292 KGGALETVIDGVT---GILFEEQTVESLAAAVERFEKNEDFDPQA---IRAHA-ERFS 342

wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.. Length = 351

 Score = 66.9 bits (163), Expect = 7e-12
 Identities = 68/279 (24%), Positives = 110/279 (39%), Gaps = 38/279 (13%)

Query: 92  MPLKLVFTSPS----QRNHSRWT----RYLISRMDEVITTSQKS--------ARFIERPS 135
           M LK VFT  S        S  T       ++ +D +I  S  S        A    + S
Sbjct: 113 MGLKTVFTDHSLFGFADIGSILTNKLLPLSLANIDRIICVSHTSKENTVLRGALAPAKVS 172

Query: 136 TVIMHGVDTERFRPTSNKQEARRHLKISEDAKLIGCFGRIRKLKGTDLFVDCMINILPHH 195
            VI + V T  F P +         K S D   I    R+   KG DL ++ + ++   H
Sbjct: 173 -VIPNAVVTHTFTPDAAD-------KPSADIITIVVASRLVYRKGIDLLLEIIPSVCDKH 224

Query: 196 PGWTAVVVGKTTLKHYLFKKNLQRRIYANGLKKRILFID--EQSSIEDWYRALNIFVAPP 253
           P    +++G    K    ++ L++      L+ R++ +       + D     +IF+   
Sbjct: 225 PEVRFIIIGDGP-KRIDLEEMLEK----LFLQDRVVMLGTVPHDRVRDVLVRGDIFLNTS 279

Query: 254 LYEGFGLTPLEAMASGIPVVASNTGVFSELLDPENAKAGVIVPPRNLHALEKAVLYFMNS 313
           L E F +  +EA + G+PVV++  G   E+L  +    G   P   + A+EKA+      
Sbjct: 280 LTEAFCMVIVEAASCGLPVVSTRVGGIPEVLPEDMITLGEPGPDDLVGAVEKAI------ 333

Query: 314 KKIMSDTGNRGRERAVKHFSIVKEASDIGKVYDRLLRTA 352
              +        +R  K +S    A    KVYDR   T+
Sbjct: 334 -TKLRTLPLEFHDRVKKMYSWKDVAERTEKVYDRAATTS 371

Length = 426

 Score = 66.5 bits (163), Expect = 1e-11
 Identities = 47/227 (20%), Positives = 79/227 (34%), Gaps = 42/227 (18%)

Query: 121 ITTSQKSARFIERPSTVIMHGVDTERFRPTSNKQEARRHLKISEDAKLIGCF-GRIRKLK 179
           I+ +Q+           + +G+D + +     +     +L           F GRI   K
Sbjct: 138 ISDAQRRPWPPLPWVATVHNGIDLDDYPF---RGPKGDYL----------LFLGRISPEK 184

Query: 180 GTDLFVDCMINILPHHPGWTAVVVGKTTLKHYLFKKNLQRRIYANGLKKRILFIDEQSSI 239
           G  L +           G    + G  +   Y F + +   +        I ++ E    
Sbjct: 185 GPHLAIR-----AARRAGIPLKLAGPVSDPDY-FYREIAPELLDG---PDIEYLGEVGG- 234

Query: 240 EDWYRALN-----IFVAPPLY-EGFGLTPLEAMASGIPVVASNTGVFSELLDPENAKAGV 293
            +    L      +F  P L+ E FGL  +EAMA G PV+A   G   E+++      G 
Sbjct: 235 AEKAELLGNARALLF--PILWEEPFGLVMIEAMACGTPVIAFRRGAVPEVVEDG--VTGF 290

Query: 294 IVPPRNLHALEKAVLYFMNSKKIMSDTGNRGRERAVKHFSIVKEASD 340
           +V   ++  L  AV       +         R RA + FS  +   D
Sbjct: 291 LVD--SVEELAAAV------ARADRLDRAACRRRAERRFSAARMVDD 329

aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.. Length = 335

 Score = 64.1 bits (156), Expect = 5e-11
 Identities = 63/254 (24%), Positives = 98/254 (38%), Gaps = 33/254 (12%)

Query: 118 DEVITTSQKSARFIER--PST------VIMHGVDTERFRPTSNKQEARRHLKISEDAKLI 169
           D VI  S      I +  P        VI +G+DT+ ++P  +         I      I
Sbjct: 146 DRVIAVSGGMREDILKYYPDLDPEKVHVIYNGIDTKEYKP-DDGNVVLDRYGIDRSRPYI 204

Query: 170 GCFGRIRKLKGTDLFVDCMINILPHHPGWTAVVVGKTTLK--------HYLFKKNLQRRI 221
              GRI + KG    +D +  I         VV+                      + R 
Sbjct: 205 LFVGRITRQKGVPHLLDAVHYIPKD----VQVVLCAGAPDTPEVAEEVRQAVALLDRNRT 260

Query: 222 YANGLKKRILFIDEQSSIEDWYRALNIFVAPPLYEGFGLTPLEAMASGIPVVASNTGVFS 281
               + K +     +  + +      +FV P +YE  G+  LEAMA G PVVAS TG   
Sbjct: 261 GIIWINKML----PKEELVELLSNAEVFVCPSIYEPLGIVNLEAMACGTPVVASATGGIP 316

Query: 282 ELLDPENAKAGVIVPPRN------LHALEKAVLYFMNSKKIMSDTGNRGRERAVKHFSIV 335
           E++   + + G +VPP N         L KA+   +   ++    G  GR+RA + FS  
Sbjct: 317 EVV--VDGETGFLVPPDNSDADGFQAELAKAINILLADPELAKKMGIAGRKRAEEEFSWG 374

Query: 336 KEASDIGKVYDRLL 349
             A    ++Y ++L
Sbjct: 375 SIAKKTVEMYRKVL 388

This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. Length = 388

 Score = 51.5 bits (124), Expect = 3e-07
 Identities = 56/257 (21%), Positives = 95/257 (36%), Gaps = 29/257 (11%)

Query: 94  LKLVFTSPSQRNHSRWTRYLISRMDEVITTSQK-SARFIER---PSTVIM--HGVDTERF 147
           L L+      R  + + R L+ R D V T S+    +  E+      VI   +  +  RF
Sbjct: 149 LGLLKGGKVARLATAFERSLLRRFDNVSTISRSMMNKAREKGVAAEKVIFFPNWSEVARF 208

Query: 148 RPTSNKQEA--RRHLKISEDAKLIGCFGRIRKLKGTDLFVDCMINILPHHPGWTAVVVGK 205
           +P ++      R  L + +  K++   G I + +G +L +D     L   P    V+ G+
Sbjct: 209 QPVADADVDALRAQLGLPDGKKIVLYSGNIGEKQGLELVID-AARRLRDRPDLIFVICGQ 267

Query: 206 TTLKHYLFKKNLQRRIYANGLKKRILFIDEQSS--IEDWYRALNIFVAPPLYEGFGL--- 260
                   K  L++     GL   + F+  Q    +    +  +  + P       L   
Sbjct: 268 GG-----GKARLEKMAQCRGLP-NVHFLPLQPYDRLPALLKMADCHLLPQKAGAADLVLP 321

Query: 261 TPLEAM-ASGIPVVAS---NTGVFSELLDPENAKAGVIVPPRNLHALEKAVLYFMNSKKI 316
           + L  M ASG  VVA+    T +   +        GV V P ++ AL  A+        +
Sbjct: 322 SKLTNMLASGRNVVATAEPGTELGQLV-----EGIGVCVEPESVEALVAAIAALARQALL 376

Query: 317 MSDTGNRGRERAVKHFS 333
               G   RE A +   
Sbjct: 377 RPKLGTVAREYAERTLD 393

Length = 412

 Score = 44.5 bits (106), Expect = 4e-05
 Identities = 73/284 (25%), Positives = 110/284 (38%), Gaps = 48/284 (16%)

Query: 92  MPLKLVFTSPSQRNHS-------------RWTRYLISRMDEVITTSQKSA-----RFIER 133
           M LK VFT     +HS             +  R+ ++ +D VI  S  S      R    
Sbjct: 112 MGLKTVFT-----DHSLFGFADASSIHTNKLLRFSLADVDHVICVSHTSKENTVLRASLD 166

Query: 134 PS--TVIMHGVDTERFRPTSNKQEARRHLKISEDAKLIGCFGRIRKLKGTDLFVDCMINI 191
           P   +VI + VD+  F P  +K+          D   I    R+   KG DL V  +  I
Sbjct: 167 PERVSVIPNAVDSSDFTPDPSKR--------DNDKITIVVISRLVYRKGIDLLVGIIPEI 218

Query: 192 LPHHPGWTAVVVG----KTTLKHYLFKKNLQRRIYANGLKKRILFIDEQSSIEDWYRALN 247
              HP    ++ G    +  L+    K NLQ R+        +L       + D     +
Sbjct: 219 CKKHPNVRFIIGGDGPKRILLEEMREKYNLQDRV-------ELLGAVPHERVRDVLVQGH 271

Query: 248 IFVAPPLYEGFGLTPLEAMASGIPVVASNTGVFSELLDPENAKAGVIVPPRNLHALEKAV 307
           IF+   L E F +  +EA + G+ VV++  G   E+L P+            +  LE+A+
Sbjct: 272 IFLNTSLTEAFCIAIVEAASCGLLVVSTRVGGIPEVLPPDMILLAEPDVESIVRKLEEAI 331

Query: 308 LYFMNSKKIMSDTGNRGRERAVKHFSIVKEASDIGKVYDRLLRT 351
                 K       NR +    K +S    A    KVYDR+L+T
Sbjct: 332 SILRTGKHDPWSFHNRVK----KMYSWEDVAKRTEKVYDRILQT 371

Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.. Length = 398

 Score = 40.2 bits (94), Expect = 8e-04
 Identities = 54/264 (20%), Positives = 89/264 (33%), Gaps = 42/264 (15%)

Query: 93  PLKLVFTSPSQRNHSRWTRY------LISRMDEVITTSQKSA-RFIE------------- 132
           PL LV    S R+ +R+ +       L   +D ++  S++ A RF               
Sbjct: 148 PLVLVNARLSDRSFARYAKLKFLARLLFKNIDLILAQSEEDAQRFRSLGAKPVVVTGNLK 207

Query: 133 ---RPSTVIMHGVDTERFRPTSNKQEARRHLKIS----EDAKLIGCFGRIRKLKGTDLFV 185
               P   +   +   R +           +  S    E+  ++     ++K      F 
Sbjct: 208 FDIEPPPQLAAELAALRRQL---GGHRPVWVAASTHEGEEEIILDAHQALKKQ-----FP 259

Query: 186 DCMINILPHHPGWTAVVVGKTTLKHYLFKKNLQRRIYANGLKKRILFIDEQSSIEDWYRA 245
           + ++ ++P HP     V      K        + +         +L  D    +   Y  
Sbjct: 260 NLLLILVPRHPERFKAVENLLKRKG--LSVTRRSQGDPPFSDTDVLLGDTMGELGLLYGI 317

Query: 246 LNI-FVAPPLYEGFGLTPLEAMASGIPVVAS-NTGVFSELL-DPENAKAGVIVPPRNLHA 302
            +I FV   L    G  PLE  A G PV+    T  FS++      A AG+ V   +L  
Sbjct: 318 ADIAFVGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAERLLQAGAGLQVEDADL-- 375

Query: 303 LEKAVLYFMNSKKIMSDTGNRGRE 326
           L KAV   +  +      G  G E
Sbjct: 376 LAKAVELLLADEDKREAYGRAGLE 399

Length = 419

 Score =  133 bits (336), Expect = 8e-32
 Identities = 55/179 (30%), Positives = 96/179 (53%), Gaps = 10/179 (5%)

Query: 152 NKQEARRHLKISEDAKLIGCFGRIRKLKGTDLFVDCMINILPH-HPGWTAVVVGKTTLKH 210
           +++E R+ L I ED  +I   GR+   KG DL ++    +    HP    V+VG    + 
Sbjct: 1   DREEERKKLGIPEDKPIILFVGRLVPEKGLDLLLEAFALLKEQLHPNLKLVIVGDGEEE- 59

Query: 211 YLFKKNLQRRIYANGLKKRILFIDEQSS--IEDWYRALNIFVAPPLYEGFGLTPLEAMAS 268
               K L++     GL+  ++F+       + + YR  ++FV P  YEGFGL  LEAMA+
Sbjct: 60  ----KKLKKLALKLGLEDNVIFVGFVPREDLIELYRIADLFVLPSRYEGFGLVLLEAMAA 115

Query: 269 GIPVVASNTGVFSELLDPENAKAGVIVPPRNLHALEKAVLYFMNSKKIMSDTGNRGRER 327
           G+PV+AS+ G  +E++  ++ + G++V P +  AL +A+   +  +++    G   R+R
Sbjct: 116 GVPVIASDVGGPAEIV--KDGETGLLVDPGDAEALAEAIEKLLKDEELRERLGENARKR 172

Mutations in this domain of subunit A of phosphatidylinositol N-acetylglucosaminyltransferase lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 172

 Score =  107 bits (270), Expect = 4e-24
 Identities = 60/201 (29%), Positives = 95/201 (47%), Gaps = 10/201 (4%)

Query: 135 STVIMHGVDTERFRP-TSNKQEARRHLKISEDAKLIGCFGRIRKLKGTDLFVDCMINILP 193
           S V+ +G+DT+RFR   + + + R  L +  D  +I   GR+ + K     +     +L 
Sbjct: 156 SFVVYNGIDTDRFRKDPARRLKIRNALGVKNDTFVILAVGRLVEAKDYPNLLKAFAKLLS 215

Query: 194 HHPGWTAVVVGKTTLKHYLFKKNLQRRIYANGLKKRILFIDEQSSIEDWYRALNIFVAPP 253
            +     ++ G   L+       L+R I A GL  R+  +  +  I  +Y A ++FV   
Sbjct: 216 DYLDIKLLIAGDGPLR-----ATLERLIKALGLSNRVKLLGLRDDIAAYYNAADLFVLSS 270

Query: 254 LYEGFGLTPLEAMASGIPVVASNTGVFSELLDPENAKAGVIVPPRNLHALEKAVLYFMNS 313
            +EGFGL   EAMA  +PVVA++ G   E++      +G+IVP  +  AL   +   +  
Sbjct: 271 AWEGFGLVVAEAMACELPVVATDAGGVREVVGD----SGLIVPISDPEALANKIDEILKM 326

Query: 314 KKIMSDTGNRGRERAVKHFSI 334
                D     RER VK FSI
Sbjct: 327 SGEERDIIGARRERIVKKFSI 347

In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria.. Length = 360

 Score =  103 bits (259), Expect = 8e-23
 Identities = 56/175 (32%), Positives = 91/175 (52%), Gaps = 13/175 (7%)

Query: 163 SEDAKLIGCFGRIRKLKGTDLFVDCMINILPHHPGWTAVVVGKTTLKHYLFKKNLQRRIY 222
              +K I   GR+   KG DL ++    I   HP W   +VG    +     + L+  I 
Sbjct: 175 DLKSKRILAVGRLVPQKGFDLLIEAWAKIAKKHPDWKLRIVGDGPER-----EALEALIK 229

Query: 223 ANGLKKRILFIDEQSSIEDWYRALNIFVAPPLYEGFGLTPLEAMASGIPVVASN--TGVF 280
             GL+ R++ +    +IE++Y   +IFV    +EGF +  LEAMA G+PV++ +  TG  
Sbjct: 230 ELGLEDRVILLGFTKNIEEYYAKASIFVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGP- 288

Query: 281 SELLDP-ENAKAGVIVPPRNLHALEKAVLYFMNSKKIMSDTGNRGRERAVKHFSI 334
           SE+++   N   G++VP  ++ AL +A+L  M  +++    G   RE A + FSI
Sbjct: 289 SEIIEDGVN---GLLVPNGDVEALAEALLRLMEDEELRKRMGANARESA-ERFSI 339

AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.. Length = 348

 Score =  102 bits (255), Expect = 2e-22
 Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 12/217 (5%)

Query: 138 IMHGVDTERFRPTS-NKQEARRHLKISEDAKLIGCFGRIRKLKGTDLFVDCMINIL---- 192
           I +GVDTERF P+  ++         ++++ ++G  GR++ +K     V     ++    
Sbjct: 165 IYNGVDTERFHPSRGDRSPILPPDFFADESVVVGTVGRLQAVKDQPTLVRAFALLVRQLP 224

Query: 193 PHHPGWTAVVVGKTTLKHYLFKKNLQRRIYANGLKKRILFIDEQSSIEDWYRALNIFVAP 252
                   V+VG    +        ++ + A GL   +    E+  +    +AL++FV P
Sbjct: 225 EGAERLRLVIVGDGPAR-----GACEQMVRAAGLAHLVWLPGERDDVPALMQALDLFVLP 279

Query: 253 PLYEGFGLTPLEAMASGIPVVASNTGVFSELLDPENAKAGVIVPPRNLHALEKAVLYFMN 312
            L EG   T LEAMASG+PV+A+  G   EL+  ++   G +VPP +  AL +A+  +++
Sbjct: 280 SLAEGISNTILEAMASGLPVIATAVGGNPELV--QHGVTGALVPPGDAVALARALQPYVS 337

Query: 313 SKKIMSDTGNRGRERAVKHFSIVKEASDIGKVYDRLL 349
                   G  GR RA + FSI    +    +YD+LL
Sbjct: 338 DPAARRAHGAAGRARAEQQFSINAMVAAYAGLYDQLL 374

Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. Length = 374

 Score = 97.3 bits (243), Expect = 6e-21
 Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 9/205 (4%)

Query: 136 TVIMHGVDTERFRPTSNKQE----ARRHLKISEDAKLIGCFGRIRKLKGTDLFVDCMINI 191
            VI  GVD +RF P +   E      R   + +   +I   GR+ + KG ++F++ +  +
Sbjct: 151 RVIPRGVDLDRFDPGAVPPERILALAREWPLPKGKPVILLPGRLTRWKGQEVFIEALARL 210

Query: 192 LPHHPGWTAVVVGKTTLKHYLFKKNLQRRIYANGLKKRILFIDEQSSIEDWYRALNIFVA 251
               P    ++VG        +   L   I   GL+ R+ F+   S +   Y   +I V+
Sbjct: 211 KKDDPDVHLLIVGDA-QGRRFYYAELLELIKRLGLQDRVTFVGHCSDMPAAYALADIVVS 269

Query: 252 PPLY-EGFGLTPLEAMASGIPVVASNTGVFSELLDPENAKAGVIVPPRNLHALEKAVLYF 310
                E FG T +EA A G PV+AS+ G   E + P     G++VPP +  AL +A+   
Sbjct: 270 ASTEPEAFGRTAVEAQAMGRPVIASDHGGARETVRPGE--TGLLVPPGDAEALAQALDQI 327

Query: 311 MNSKKIMSDT-GNRGRERAVKHFSI 334
           ++           + R      FS 
Sbjct: 328 LSLLPEGRAKMFAKARMCVETLFSY 352

WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.. Length = 355

 Score = 89.8 bits (223), Expect = 1e-18
 Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 30/228 (13%)

Query: 137 VIMHGVDTERFRPTSNKQEARRHLKISEDAKLIGCFGRIRKLKGTDLFVDCMINILPHHP 196
           V+  G D ERFRP  ++   R  L +  D K++   GRI+ LK  D+ +  +  +L   P
Sbjct: 191 VVAPGADLERFRP-GDRATERARLGLPLDTKVVAFVGRIQPLKAPDVLLRAVAELLDRDP 249

Query: 197 GWTAVVV--------GKTTLKHYLFKKNLQRRIYANGLKKRILFIDEQSSIE--DWYRAL 246
                V+        G  T         L   +   G+  R+ F+  +   E    YRA 
Sbjct: 250 DRNLRVIVVGGPSGSGLATPDAL---IELAAEL---GIADRVRFLPPRPPEELVHVYRAA 303

Query: 247 NIFVAPPLYEGFGLTPLEAMASGIPVVASNTGVFSELLDPENAKAGVIVPPRNLHALEKA 306
           ++   P   E FGL  +EA A G PVVA+  G     +   + + G++V   +      A
Sbjct: 304 DVVAVPSYNESFGLVAMEAQACGTPVVAARVGGLPVAVA--DGETGLLVDGHDPADWADA 361

Query: 307 VLYFMNSKKIMSDTGNRGR--ERAVKH---FSIVKEASDIGKVYDRLL 349
           +       +++ D   R R    AV+H   FS    A  +   Y   L
Sbjct: 362 L------ARLLDDPRTRIRMGAAAVEHAAGFSWAATADGLLSSYRDAL 403

Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. Length = 405

 Score = 77.7 bits (192), Expect = 4e-15
 Identities = 55/211 (26%), Positives = 89/211 (42%), Gaps = 25/211 (11%)

Query: 136 TVIMHGVDTERFRPTSNKQEARRHLKISEDAKLIGCFGRIRKLKGTDLFVDCMINILPHH 195
            V   GVDT +F P +  +   R L            GR  + KG  L ++    +    
Sbjct: 168 HVHPIGVDTAKFTPATPARRPPRIL----------FVGRFVEKKGPLLLLEAFARLARRV 217

Query: 196 PGWTAVVVGKTTLKHYLFKKNLQRRIYANGLKKRILFIDEQS--SIEDWYRALNIFVAPP 253
           P    V++G   L        L+    A GL  R+ F+  Q    + +  R   IF+ P 
Sbjct: 218 PEVRLVIIGDGPLL-----AALEALARALGLGGRVTFLGAQPHAEVRELMRRARIFLQPS 272

Query: 254 LY------EGFGLTPLEAMASGIPVVASNTGVFSELLDPENAKAGVIVPPRNLHALEKAV 307
           +       EG  +  LEA ASG+PVVA+  G   E +  E+ + G++VP  ++ AL  A+
Sbjct: 273 VTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAV--EDGETGLLVPEGDVAALAAAL 330

Query: 308 LYFMNSKKIMSDTGNRGRERAVKHFSIVKEA 338
              +    + +  G  GR R  + F + ++ 
Sbjct: 331 GRLLADPDLRARMGAAGRRRVEERFDLRRQT 361

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.. Length = 367

 Score = 66.7 bits (163), Expect = 8e-12
 Identities = 53/197 (26%), Positives = 81/197 (41%), Gaps = 23/197 (11%)

Query: 141 GVDTERFRPTSNKQEARRHLKISE-DAKLIGCFGRIRKLKGTDLFVDCMINILPHHPGWT 199
           GVD+E F P    +E R  L   E +  LI   GR+   K  D     M  +    PG  
Sbjct: 237 GVDSESFHPRFRSEEMRARLSGGEPEKPLIVYVGRLGAEKNLDFLKRVMERL----PGAR 292

Query: 200 AVVVGKTTLKHYLFKKNLQRRIYANGLKKRILFI-----DEQSSIEDWYRALNIFVAPPL 254
              VG        +++ L++     G     +F      DE S     Y + ++FV P  
Sbjct: 293 LAFVGDGP-----YREELEK--MFAGT--PTVFTGMLQGDELSQA---YASGDVFVMPSE 340

Query: 255 YEGFGLTPLEAMASGIPVVASNTGVFSELLDPENA-KAGVIVPPRNLHALEKAVLYFMNS 313
            E  G   LEAMASG+PVVA+  G   +++ P+   K G +  P ++    + +   +  
Sbjct: 341 SETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLLAD 400

Query: 314 KKIMSDTGNRGRERAVK 330
            ++    G   RE   K
Sbjct: 401 PELRERMGAAAREEVEK 417

Length = 465

 Score = 66.1 bits (162), Expect = 2e-11
 Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 23/182 (12%)

Query: 130 FIERPSTVIMHGVDTERFRPTSNKQEARRHLKISEDAKLIGCFGRIRKLKGTDLFVDCMI 189
                 +VI +G+D +R +    +      L+        G  G++   KG DL ++   
Sbjct: 163 LFAEKISVIRNGIDLDRAKRPR-RAPPGGRLRF-------GFIGQLTPHKGVDLLLEAFK 214

Query: 190 NILPHHPGWTAVVVGKTTLKHYLFKKNLQRRIYANGLKKRILFID--EQSSIEDWYRALN 247
             LP       V+VG            L+   Y      R+ F+    Q  I+D+Y  ++
Sbjct: 215 R-LPR-GDIELVIVGN--------GLELEEESYELEGDPRVEFLGAYPQEEIDDFYAEID 264

Query: 248 IFVAPPL-YEGFGLTPLEAMASGIPVVASNTGVFSELLDPENAKAGVIVPPRNLHALEKA 306
           + V P +  E F L   EA+A+G+PV+AS+ G  +EL+       G++ PP +   L  A
Sbjct: 265 VLVVPSIWPENFPLVIREALAAGVPVIASDIGGMAELVRDG--VNGLLFPPGDAEDLAAA 322

Query: 307 VL 308
           + 
Sbjct: 323 LE 324

ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).. Length = 359

 Score = 49.1 bits (117), Expect = 2e-06
 Identities = 40/182 (21%), Positives = 65/182 (35%), Gaps = 25/182 (13%)

Query: 152 NKQEARRHLKISEDAK--LIGCFGRIRKLKGTDLFVDCMINILPH--HPGWTAVVVGK-- 205
           NK   +  L +  D    L G   R+   KG DL    ++  +      GW  V++G   
Sbjct: 278 NKVALQERLGLDVDLPGPLFGFVSRLTAQKGLDL----LLEAIDELLEQGWQLVLLGTGD 333

Query: 206 TTLKHYLFKKNLQRRIYANGLKKRILFIDEQSSIEDWYRALNIFVAPPLYEGFGLTPLEA 265
             L+  L  + L  R    G    ++  DE  +    Y   ++ + P  +E  GLT L A
Sbjct: 334 PELEEAL--RALASRH--PGRVLVVIGYDEPLAHL-IYAGADVILMPSRFEPCGLTQLYA 388

Query: 266 MASGIPVVASNTG-----VFSELLDPENAKA-GVIVPPRN----LHALEKAVLYFMNSKK 315
           M  G   +   TG     V             G +    N     +AL +A++ +     
Sbjct: 389 MRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALVLYRAPPL 448

Query: 316 IM 317
           + 
Sbjct: 449 LW 450

Length = 487

 Score = 41.8 bits (98), Expect = 3e-04
 Identities = 38/228 (16%), Positives = 78/228 (34%), Gaps = 40/228 (17%)

Query: 141 GVDTERFRPTSNKQEARRHL-----KISEDAKLIGCFGRIRKLKGTDLFVDCMINILPHH 195
           G+D E F         +  +     ++  + KLI    R+   KG    +     +L  +
Sbjct: 252 GIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEY 311

Query: 196 PGW----TAVVVGKTTLKHYLFKKNLQRRI----------YANGLKKRILFIDEQSSIED 241
           P W      + +   + +     + L+ +I          + +     + ++       +
Sbjct: 312 PEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNE 371

Query: 242 W---YRALNIFVAPPLYEGFGLTPLEAMA-----SGIPVVASNTGVFSELLDPENAKAGV 293
               YRA ++ +  PL +G  L   E +A      G+ +++   G  SEL D       +
Sbjct: 372 LLALYRAADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAASELRD------AL 425

Query: 294 IVPPRNLHALEKAVLYFMNSKKIMSDTGNRGRERAVKHFSIVKEASDI 341
           IV P +   +  A+   +     MS      R+   +         D+
Sbjct: 426 IVNPWDTKEVADAIKRALT----MS---LEERKERHEKLLKQVLTHDV 466

Length = 486

 Score = 41.6 bits (97), Expect = 3e-04
 Identities = 40/177 (22%), Positives = 71/177 (40%), Gaps = 10/177 (5%)

Query: 161 KISEDAKL-IGCFGRIRKLKGTDLFVDCMINILPHHPGWTAVVVGKTTLKHYLFKKNLQR 219
             + DA+  +G   R+   K   L+V+        HP    ++VG   L   +  +   +
Sbjct: 511 ARTSDARFTVGTVMRVDDNKRPFLWVEAAQRFAASHPKVRFIMVGGGPLLESV--REFAQ 568

Query: 220 RIYANGLKKRILFIDEQSSIEDWYRALNIFVAPPLYEGFGLTPLEAMASGIPVVASNTGV 279
           R+   G+ +RILF      +  W    N F+    +EG     +EA  SG+PVV +  G 
Sbjct: 569 RL---GMGERILFTGLSRRVGYWLTQFNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGG 625

Query: 280 FSELLDPENAKAGVIVPPRNLHA--LEKAVLYFMNSKKIMSDTGNRGRERAVKHFSI 334
             E +  E    G+ +P   + A  + +A+    +          +  + A   FS+
Sbjct: 626 AGEAVQ-EGV-TGLTLPADTVTAPDVAEALARIHDMCAADPGIARKAADWASARFSL 680

Length = 694

 Score = 38.7 bits (91), Expect = 0.002
 Identities = 49/228 (21%), Positives = 86/228 (37%), Gaps = 49/228 (21%)

Query: 136 TVIMHGVDTERFRPTSNKQEARRHL----KISEDAKLIGCFGR-IRKLKGTDLFVDCMIN 190
           +VI  G+DT+R RP  + Q AR  L     ++   ++I    R +   +G  +F+  +  
Sbjct: 180 SVIHDGIDTDRLRP--DPQ-ARLRLPNGRVLTPGDEVITFVARNLEPYRGFHVFMRALPR 236

Query: 191 ILPHHPGWTAVVVGKTTLKHYLFKKNLQRRIYANGLKK----RILFIDEQSSIEDWYRAL 246
           +L   P    V+VG                 Y          +   +DE     D  R  
Sbjct: 237 LLRARPDARVVIVGGD------------GVSYGAPPPDGESWKQHMLDELGGRLDLSR-- 282

Query: 247 NIFVAPPL-YEGF-----------GLT-P-------LEAMASGIPVVASNTGVFSELLDP 286
            +     + Y+ +            LT P       LEAMA G  VV S+T    E++  
Sbjct: 283 -VHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAPVREVI-- 339

Query: 287 ENAKAGVIVPPRNLHALEKAVLYFMNSKKIMSDTGNRGRERAVKHFSI 334
            + + G++V   +  AL  AV+  ++     +      R  A+++  +
Sbjct: 340 TDGENGLLVDFFDPDALAAAVIELLDDPARRARLRRAARRTALRYDLL 387

ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).. Length = 396

 Score =  119 bits (298), Expect = 1e-27
 Identities = 86/372 (23%), Positives = 148/372 (39%), Gaps = 38/372 (10%)

Query: 5   NIDVIAPNMKFRHTGVTSTVFGLCPIQRKLGQRLVVFGYCLPKNIPSIGISSLLTCWKKP 64
            +  +A  ++    G    V     ++    + L +    LP  I  +  + L       
Sbjct: 20  YVLELAKALRLLGRGHEVLVIAPEKLEGLGIEVLRLPSVSLPLLIVRLRPALLRLLLLLK 79

Query: 65  IGQNSRIWHARRNNEMLLGVMMR-------------------DVLRMPLKLVFTSPSQRN 105
                 I HA        G++                      +L +P  L+     +  
Sbjct: 80  RLLPYDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRLLLLLGLLRLL 139

Query: 106 HSRWTRYLISRMDEVITTSQKSARFIER-----PSTVIMHGVDTERFRPTSNKQEARRHL 160
             R  + L    D VI  S      +E         VI +G+DTE+F P      AR  L
Sbjct: 140 LKRLKKALRLLADRVIAVSPALKELLEALGVPNKIVVIPNGIDTEKFAP------ARIGL 193

Query: 161 KISEDAKLIGCFGRIRKLKGTDLFVDCMINILPHHPGWTAVVVGKTTLKHYLFKKNLQRR 220
                  ++   GR+   KG DL ++    +    P    V+VG    +    ++ L++ 
Sbjct: 194 LPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPER----REELEKL 249

Query: 221 IYANGLKKRILFIDEQSSIE--DWYRALNIFVAPPLYEGFGLTPLEAMASGIPVVASNTG 278
               GL+  + F+      E  +   + ++FV P L EGFGL  LEAMA+G PV+AS+ G
Sbjct: 250 AKKLGLEDNVKFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAAGTPVIASDVG 309

Query: 279 VFSELLDPENAKAGVIVPPRNLHALEKAVLYFMNSKKIMSDTGNRGRERAVKHFSIVKEA 338
              E++  E+ + G++VPP ++  L  A+   +   ++  + G   RER  + FS  + A
Sbjct: 310 GIPEVV--EDGETGLLVPPGDVEELADALEQLLEDPELREELGEAARERVEEEFSWERIA 367

Query: 339 SDIGKVYDRLLR 350
             + ++Y+ LL 
Sbjct: 368 EQLLELYEELLA 379

Length = 381

 Score =  184 bits (468), Expect = 4e-47
 Identities = 97/368 (26%), Positives = 149/368 (40%), Gaps = 50/368 (13%)

Query: 19  GVTSTVFGLCPIQRKLGQRLVVFGYCLPKNIPSI---GISSLLTCWKKPIGQNSRIWHAR 75
           G    V  L       G  + V               GI  +       + +   +    
Sbjct: 15  GAERHVLELARALAARGHEVTVLTPGDGGLPDEEEVGGIVVVRPPPLLRVRRLLLLLLLA 74

Query: 76  RNNEMLLGVMMRDVL----------------RMPLKLVFT-------------SPSQRNH 106
                LL     DV+                 + + LV T                 +  
Sbjct: 75  LRLRRLLRRERFDVVHAHDWLALLAAALAARLLGIPLVLTVHGLEFGRPGNELGLLLKLA 134

Query: 107 SRWTRYLISRMDEVITTSQKSARFIER-------PSTVIMHGVDTERFRPTSNKQEARRH 159
               R  + R D +I  S+ +   +           TVI +GVDTERFRP    + ARR 
Sbjct: 135 RALERRALRRADRIIAVSEATREELRELGGVPPEKITVIPNGVDTERFRP--APRAARRR 192

Query: 160 LKISEDAKLIGCFGRIRKLKGTDLFVDCMINILPHHPGWTAVVVGKTTLKHYLFKKNLQR 219
           L I ED  +I   GR+   KG DL ++ +  +   +P    V+VG   L+     + L+ 
Sbjct: 193 LGIPEDEPVILFVGRLVPRKGVDLLLEALAKLRKEYPDVRLVIVGDGPLR-----EELEA 247

Query: 220 RIYANGLKKRILFIDEQSS--IEDWYRALNIFVAPPLYEGFGLTPLEAMASGIPVVASNT 277
                GL  R+ F+       +   Y A ++FV P LYEGFGL  LEAMA+G+PVVAS+ 
Sbjct: 248 LAAELGLGDRVTFLGFVPDEDLPALYAAADVFVLPSLYEGFGLVLLEAMAAGLPVVASDV 307

Query: 278 GVFSELLDPENAKAGVIVPPRNLHALEKAVLYFMNSKKIMSDTGNRGRERAVKHFSIVKE 337
           G   E+++    + G++VPP +  AL +A+L  ++  ++    G   RER  + FS  + 
Sbjct: 308 GGIPEVVEDG--ETGLLVPPGDPEALAEAILRLLDDPELRRRLGEAARERVAERFSWDRV 365

Query: 338 ASDIGKVY 345
           A+   +VY
Sbjct: 366 AARTEEVY 373

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.. Length = 374

 Score =  101 bits (255), Expect = 2e-22
 Identities = 46/173 (26%), Positives = 96/173 (55%), Gaps = 11/173 (6%)

Query: 111 RYLISRM-DEVITTSQKSARFI-----ERPSTVIMHGVDTERFRPTSNKQEARRHLKISE 164
           R LI+R+  + +  S+++ +++      +   VI +G+D E+F      ++ RR L I E
Sbjct: 131 RKLINRLATDYLACSEEAGKWLFGKVKNKKFKVIPNGIDLEKFIFNEEIRKKRRELGILE 190

Query: 165 DAKLIGCFGRIRKLKGTDLFVDCMINILPHHPGWTAVVVGKTTLKHYLFKKNLQRRIYAN 224
           D  +IG  GR  + K  +  ++    +L  +P    ++VG   L+     + +++++   
Sbjct: 191 DKFVIGHVGRFSEQKNHEFLIEIFAELLKKNPNAKLLLVGDGELE-----EEIKKKVKEL 245

Query: 225 GLKKRILFIDEQSSIEDWYRALNIFVAPPLYEGFGLTPLEAMASGIPVVASNT 277
           GL+ +++F+  ++ + +  +A+++F+ P LYEG  L  +EA ASG+P + S+T
Sbjct: 246 GLEDKVIFLGVRNDVPELLQAMDVFLFPSLYEGLPLVLIEAQASGLPCILSDT 298

capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).. Length = 358

 Score = 81.5 bits (201), Expect = 3e-16
 Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 15/171 (8%)

Query: 128 ARFIERPSTVIMHGVDTERFRPTSNKQEARRHLKISEDAKLIGCFGRIRKLKGTDLFVDC 187
           AR +  P  + +HGV+         +      L +S         GR+   KG D  ++ 
Sbjct: 71  ARLLGIPLVLTVHGVNRSLL-----EGVPLSLLALSIGLADKVFVGRLAPEKGLDDLIEA 125

Query: 188 MINILPHHPGWTAVVVGKTTLKHYLFKKNLQRRIYANGLKKRILFIDEQSSIED---WYR 244
              +    P    V+ G    +     + L+  + A  L  R++F+      E       
Sbjct: 126 FALLKERGPDLKLVIAGDGPER-----EYLEELLAALLLLDRVIFLGGLDPEELLALLLA 180

Query: 245 ALNIFVAPPLYEGFGLTPLEAMASGIPVVASNTGVFSELLDPENAKAGVIV 295
           A ++FV P L EGFGL  LEAMA G+PV+A++ G   E++  E+   G++V
Sbjct: 181 AADVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIV--EDGLTGLLV 229

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.. Length = 229

 Score = 49.4 bits (118), Expect = 1e-06
 Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 6/151 (3%)

Query: 137 VIMHGVDTERFRPTSNKQEARRHLKISEDAKLIGCFGRIRKLKGTDLFVDCMINILPHHP 196
           ++ +G   E ++ ++ +   R+ L IS D  ++   GRI   KG  L +     +   H 
Sbjct: 165 IVPNGFCLETYQ-SNPQPNLRQQLNISPDETVLLYAGRISPDKGILLLMQAFEKLATAHS 223

Query: 197 GWTAVVVGKTTLKHYLFKKNLQRRIY--ANGLKKRILFIDEQS--SIEDWYRALNIFVAP 252
               VVVG  T      K   Q+++   A  +  R + +  Q    + ++Y   ++ V P
Sbjct: 224 NLKLVVVGDPTASSKGEKAAYQKKVLEAAKRIGDRCIMLGGQPPEKMHNYYPLADLVVVP 283

Query: 253 PLY-EGFGLTPLEAMASGIPVVASNTGVFSE 282
               E F +  +EAMA+G PV+AS  G  +E
Sbjct: 284 SQVEEAFCMVAVEAMAAGKPVLASTKGGITE 314

Length = 380

 Score = 42.2 bits (99), Expect = 2e-04
 Identities = 48/194 (24%), Positives = 80/194 (41%), Gaps = 45/194 (23%)

Query: 122 TTSQKSARFIERPSTVIMHGVDTERFRP------------------TSNKQEARRHLKIS 163
           T    S +F+      I++G+DT+ + P                   +NK   R+ L +S
Sbjct: 719 TLKFHSKKFVG-----ILNGIDTDTWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLS 773

Query: 164 -EDAK--LIGCFGRIRKLKGTDLFVDCMINILPHHPGWTAVVVGKTTLKHYLFKKNLQRR 220
             DA   L+GC  R+   KG  L    +        G   V++G + + H      +QR 
Sbjct: 774 SADASQPLVGCITRLVPQKGVHLIRHAIYKTA--ELGGQFVLLGSSPVPH------IQRE 825

Query: 221 I--YANGLKKR-----ILFIDEQSSIEDW-YRALNIFVAPPLYEGFGLTPLEAMASG-IP 271
               A+  +       IL  DE  ++    Y A ++F+ P ++E  GLT + AM  G +P
Sbjct: 826 FEGIADQFQSNNNIRLILKYDE--ALSHSIYAASDMFIIPSMFEPCGLTQMIAMRYGSVP 883

Query: 272 VVASNTGVFSELLD 285
           +V    G+   + D
Sbjct: 884 IVRKTGGLNDSVFD 897

Length = 977

 Score = 78.1 bits (193), Expect = 4e-15
 Identities = 55/221 (24%), Positives = 91/221 (41%), Gaps = 29/221 (13%)

Query: 106 HSRWTRYLISRMDEVITTSQKSAR-FIERPS----TVIMHGVDTERFRPTSNKQEARRHL 160
                R L+ R D VI  S +  R  + R       VI HGV      P +   E+ + L
Sbjct: 124 DRALLRLLLRRADAVIVMSSELLRALLLRAYPEKIAVIPHGV----PDPPAEPPESLKAL 179

Query: 161 KISEDAKLIGCFGRIRKLKGTDLFVDCMINILPHHPGWTAVVVGKT---TLKHYLFKKNL 217
              +   ++  FG +R  KG +L ++ +  ++  HP    +V G+T     ++      L
Sbjct: 180 GGLDGRPVLLTFGLLRPYKGLELLLEALPLLVAKHPDVRLLVAGETHPDLERYRGEAYAL 239

Query: 218 QRRIYANGLKKRILFIDEQSSIEDWYRAL---NIFVAPPLYEGFGLT-----PLEAMASG 269
             R    GL  R++FI+     E+        ++ V P  Y     T        A+  G
Sbjct: 240 AER---LGLADRVIFINRYLPDEELPELFSAADVVVLP--YRSADQTQSGVLAY-AIGFG 293

Query: 270 IPVVASNTGVFSELLDPENAKAGVIVPPRNLHALEKAVLYF 310
            PV+++  G   E+LD      G++VPP +  AL +A+   
Sbjct: 294 KPVISTPVGHAEEVLDGGT---GLLVPPGDPAALAEAIRRL 331

ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.. Length = 366

 Score = 51.0 bits (123), Expect = 5e-07
 Identities = 53/251 (21%), Positives = 88/251 (35%), Gaps = 67/251 (26%)

Query: 118 DEVITTSQKSARFIERPS----------------TVIMHGVDTERFRP------------ 149
           D V T S   AR I  P                 + I++G+D + + P            
Sbjct: 212 DAVTTVSPTYAREILTPEFGEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSA 271

Query: 150 --TSNKQEARRHL------KISEDAKLIGCFGRIRKLKGTDLFVDCMINILPHHPGWTAV 201
                K E +  L       +  DA L G  GR+ + KG DL ++ +  +L        V
Sbjct: 272 DDLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELGGQL--V 329

Query: 202 VVGK--TTLKHYLFKKNLQRRIYANGLKKRILFI---DEQSS--IEDWYRALNIFVAPPL 254
           ++G      +  L +        A     R+  +   DE  +  I   Y   + F+ P  
Sbjct: 330 ILGSGDPEYEEALRE-------LAARYPGRVAVLIGYDEALAHLI---YAGADFFLMPSR 379

Query: 255 YEGFGLTPLEAMASGIPVVASNTG-----VFSELLDPENAKA-GVIVPPRN----LHALE 304
           +E  GLT + AM  G   +   TG     V     + +  +  G +    N    L AL 
Sbjct: 380 FEPCGLTQMYAMRYGTVPIVRATGGLADTVID--YNEDTGEGTGFVFEGYNADALLAALR 437

Query: 305 KAVLYFMNSKK 315
           +A+  + + + 
Sbjct: 438 RALALYRDPEA 448

Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.. Length = 476

 Score = 45.7 bits (109), Expect = 2e-05
 Identities = 50/243 (20%), Positives = 78/243 (32%), Gaps = 65/243 (26%)

Query: 121 ITTSQKS------ARFIERPSTVIMHGVDTERFRPTS------------------NKQEA 156
           I T +         +        I++G+DTE + P +                  NK+  
Sbjct: 220 ILTPEFGYGLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEAL 279

Query: 157 RRHLKISEDAK--LIGCFGRIRKLKGTDLFVDCMINILPHHPGWTA--VVVGK------T 206
           +  L +  D    L G   R+ + KG DL    ++  LP         VV+G        
Sbjct: 280 QEELGLPVDDDVPLFGVISRLTQQKGVDL----LLAALPELLELGGQLVVLGTGDPELEE 335

Query: 207 TLKHYLFKKNLQRRI---YANGLKKRILFIDEQSSIEDWYRALNIFVAPPLYEGFGLTPL 263
            L+    +     R+   Y   L   I            Y   +  + P  +E  GLT L
Sbjct: 336 ALRELAERYPGNVRVIIGYDEALAHLI------------YAGADFILMPSRFEPCGLTQL 383

Query: 264 EAMASGIPVVASNTG-----VFSELLDPENAKA-GVIVPPRN----LHALEKAVLYFMNS 313
            AM  G   +   TG     V     DPE     G +    +    L AL +A+  +   
Sbjct: 384 YAMRYGTVPIVRRTGGLADTVVD--GDPEAESGTGFLFEEYDPGALLAALSRALRLYRQD 441

Query: 314 KKI 316
             +
Sbjct: 442 PSL 444

This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. Length = 473

 Score = 64.6 bits (158), Expect = 4e-11
 Identities = 27/104 (25%), Positives = 57/104 (54%), Gaps = 5/104 (4%)

Query: 214 KKNLQRRIYANGLKKRILFIDEQSSIEDWYRALNIFVAPPLYEGFGLTPLEAMASGIPVV 273
           ++ L+  I   GL+  +        +++ Y+   + +     EGFGL+ +EA++ G+PV+
Sbjct: 247 EEKLKELIEELGLEDYVFLKGYTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVI 306

Query: 274 ASNT--GVFSELLDPENAKAGVIVPPRNLHALEKAVLYFMNSKK 315
           + +   G  SE++  E+ + G +VP  ++ AL +A++  +N  K
Sbjct: 307 SYDVNYGP-SEII--EDGENGYLVPKGDIEALAEAIIELLNDPK 347

In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria.. Length = 372

 Score = 50.3 bits (120), Expect = 7e-07
 Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 9/125 (7%)

Query: 215 KNLQRRIYANGLKKRILFIDEQSSIEDWYRALN----IFVAPPLYEGFGLTPLEAMASGI 270
           K L   I    L  + ++    ++    YR       +   P   E FG+ P+EAMA G+
Sbjct: 332 KELLSLIEEYDLLGQFVWFLPSTTRVAKYRLAADTKGVLYQPA-NEHFGIVPIEAMACGL 390

Query: 271 PVVASNTGVFSELLDPENAKAGVIVPP--RNLHALEKAVLYFMNSKKIMSDTGNRGRERA 328
           PVVA+N G  +E++   +   G+++ P    +  L  A+L      ++ +  G  G +R 
Sbjct: 391 PVVATNNGGPAEIV--VHGVTGLLIDPGQEAVAELADALLKLRRDPELWARMGKNGLKRV 448

Query: 329 VKHFS 333
            + FS
Sbjct: 449 KEMFS 453

Length = 495

 Score = 41.2 bits (97), Expect = 5e-04
 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 3/71 (4%)

Query: 240 EDWYRALNIFVAPPLYEGFGLTPLEAMASGIPVVASNT---GVFSELLDPENAKAGVIVP 296
           E++ R  ++ V P  YE +G TP E    GIP + +N    G F E    +    G+ + 
Sbjct: 469 EEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHIEDPESYGIYIV 528

Query: 297 PRNLHALEKAV 307
            R   + +++V
Sbjct: 529 DRRFKSPDESV 539

GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.. Length = 590

 Score = 38.8 bits (90), Expect = 0.003
 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 3/71 (4%)

Query: 240 EDWYRALNIFVAPPLYEGFGLTPLEAMASGIPVVASNT---GVFSELLDPENAKAGVIVP 296
           E++ R  ++ V P  YE +G TP E    GIP V +N    G F E    +    G+ + 
Sbjct: 495 EEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDPQAYGIYIV 554

Query: 297 PRNLHALEKAV 307
            R   + +++V
Sbjct: 555 DRRFKSPDESV 565

Length = 692

 Score = 53.4 bits (129), Expect = 9e-08
 Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 6/86 (6%)

Query: 256 EGFGLTPLEAMASGIPVVASNT-GVFSELLDPENAKAGVIVPPRNLHALEKAVLYFMNSK 314
           EGFGLT  EA+  G PV+A    G+  ++ D E    G +V           +LY +   
Sbjct: 284 EGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGET---GFLVDTVE--EAAVRILYLLRDP 338

Query: 315 KIMSDTGNRGRERAVKHFSIVKEASD 340
           ++    G   RE   ++F I +   D
Sbjct: 339 ELRRKMGANAREHVRENFLITRHLKD 364

The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.. Length = 372

 Score = 51.8 bits (125), Expect = 3e-07
 Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 3/81 (3%)

Query: 253 PLYEGFGLTPLEAMASGIPVVASNTGVFSELLDPENAKAGVIVPPRNLHALEKAVLYFMN 312
           P  E FG+ PLEAM +G PV+A N+G   E +   + + G +  P       +A+L   N
Sbjct: 307 PSNEHFGIVPLEAMYAGKPVIACNSGGPLETVV--DGETGFLCEP-TPEEFAEAMLKLAN 363

Query: 313 SKKIMSDTGNRGRERAVKHFS 333
              +    G  GR+R  + FS
Sbjct: 364 DPDLADRMGAAGRKRVKEKFS 384

ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.. Length = 392

 Score = 51.3 bits (123), Expect = 4e-07
 Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 14/92 (15%)

Query: 248 IFVAPPLYEGFGLTPLEAMASGIPVVASNTGVFSELLDPENAKAGVIVPPRNL----HAL 303
           IFV P L E FGLT LEA A G+P+VA++ G   +++   N + G++V   +L     AL
Sbjct: 343 IFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDII--ANCRNGLLVDVLDLEAIASAL 400

Query: 304 EKAVLYFMNSK--KIMSDTGNRGRERAVKHFS 333
           E A     +S   ++ S  G  G  R   H+S
Sbjct: 401 EDA---LSDSSQWQLWSRNGIEGVRR---HYS 426

This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. Length = 439

 Score = 49.7 bits (119), Expect = 1e-06
 Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 3/64 (4%)

Query: 248 IFVAPPLYEGFGLTPLEAMASGIPVVASNTGVFSELLDPENAKAGVIVPPRNL-HALEKA 306
           IFV P LYE FGLT LEAM  G+P  A+  G   E++  ++  +G  + P +   A EK 
Sbjct: 646 IFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPLEII--QDGVSGFHIDPYHGEEAAEKI 703

Query: 307 VLYF 310
           V +F
Sbjct: 704 VDFF 707

This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. Length = 784

 Score = 50.9 bits (121), Expect = 5e-07
 Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 5/99 (5%)

Query: 184 FVDCMINILPHHPGWTAVVVGKTTLKHYLFKKNLQRRIYANGLKKRILFIDEQSSIEDWY 243
           ++D     L HHP    V+VG   L+        Q+R    G+ +RILF+     +  W 
Sbjct: 416 WIDFAARYLQHHPATRFVLVGDGDLR-----AEAQKRAEQLGILERILFVGASRDVGYWL 470

Query: 244 RALNIFVAPPLYEGFGLTPLEAMASGIPVVASNTGVFSE 282
           + +N+F+    YEG     +EA   G+PV+++  G  +E
Sbjct: 471 QKMNVFILFSRYEGLPNVLIEAQMVGVPVISTPAGGSAE 509

Length = 578

 Score = 46.5 bits (111), Expect = 9e-06
 Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 2/51 (3%)

Query: 249 FVAPPLYEGFGLTPLEAMASGIPVVASNTGVFSELLDPENAKAGVIVPPRN 299
           FV P LYE FGLT +EAM  G+P  A+  G  +E++   +  +G  + P +
Sbjct: 670 FVQPALYEAFGLTVVEAMTCGLPTFATCQGGPAEII--VDGVSGFHIDPYH 718

Length = 815

 Score = 41.7 bits (98), Expect = 3e-04
 Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 4/47 (8%)

Query: 236 QSSIEDWYR----ALNIFVAPPLYEGFGLTPLEAMASGIPVVASNTG 278
           QS + D YR       +F+ P   E FGLT +EA A G+P+VA+  G
Sbjct: 558 QSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNG 604

Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. Length = 1050