HHsearch alignment for GI: 255764474 and conserved domain: COG0297
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism].
Probab=99.94 E-value=1.6e-25 Score=190.87 Aligned_cols=276 Identities=20% Similarity=0.271 Sum_probs=203.4
Q ss_pred CCCEEEEECCCHHHHHHHHHHHH----HCCCEEEEECCHHHHHH--------H------------------HHHHHHHHH
Q ss_conf 59708996285468999999997----09981999757456201--------1------------------347989962
Q gi|255764474|r 67 QNSRIWHARRNNEMLLGVMMRDV----LRMPLKLVFTSPSQRNH--------S------------------RWTRYLISR 116 (352)
Q Consensus 67 ~~~~ivh~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~--------~------------------~~~~~l~~~ 116 (352)
T Consensus 129 ~~pDIvH~hDWqt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ 208 (487)
T COG0297 129 WLPDIVHAHDWQTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYY 208 (487)
T ss_pred CCCCEEEEECHHHHHHHHHHHHCCCCCCCCCEEEEEEECEEECCCCHHHHHHHCCCHHHHHHCEEEECCCCHHHHHHHEE
T ss_conf 77888885018877789998512335666775999941002301642567772698888621104664760266543042
Q ss_pred CCEEEECCHHHHHHCC----------------CCEEEECCCCCHHHHCCCCC------------------HHHHHHHCCC
Q ss_conf 6689988989997436----------------88399748827778237843------------------2687887288
Q gi|255764474|r 117 MDEVITTSQKSARFIE----------------RPSTVIMHGVDTERFRPTSN------------------KQEARRHLKI 162 (352)
Q Consensus 117 ~d~ii~~s~~~~~~~~----------------~~~~vi~~gid~~~~~~~~~------------------~~~~~~~~~~ 162 (352)
T Consensus 209 ad~vttVSptYa~Ei~t~~~g~gl~g~l~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~~~gL 288 (487)
T COG0297 209 ADAVTTVSPTYAGEIYTPEYGEGLEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQERLGL 288 (487)
T ss_pred CCEEEEECHHHHHHHCCCCCCCCCHHHHHHCCCCEEEEEEEEEECCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 22899988778776526002555210555104518998744773231866443300147701033467899999998098
Q ss_pred CC--CCCEEEEEEEECHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCC-CCCCCCC
Q ss_conf 98--87279995122644512366654565300477405886313332100014667764431123322122-2222331
Q gi|255764474|r 163 SE--DAKLIGCFGRIRKLKGTDLFVDCMINILPHHPGWTAVVVGKTTLKHYLFKKNLQRRIYANGLKKRILF-IDEQSSI 239 (352)
Q Consensus 163 ~~--~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~i~~~~l~~~V~~-~g~~~~~ 239 (352)
T Consensus 289 ~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~~vilG~gd~---~le~~~~~la~~~~~--~~~~~i~~~~~l 361 (487)
T COG0297 289 DVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQLVLLGTGDP---ELEEALRALASRHPG--RVLVVIGYDEPL 361 (487)
T ss_pred CCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHC--CEEEEEECCCH---HHHHHHHHHHHHCCC--EEEEEEEECHHH
T ss_conf 77999758999422420134558999999999708--36999826827---899999999986676--099996336899
Q ss_pred -CCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHCCC------CCCCEEEEECCCCHHHHHHHHHHHH-
Q ss_conf -00000000000123332222221000001001110278841010023------4884249965999899999999998-
Q gi|255764474|r 240 -EDWYRALNIFVAPPLYEGFGLTPLEAMASGIPVVASNTGVFSELLDP------ENAKAGVIVPPRNLHALEKAVLYFM- 311 (352)
Q Consensus 240 -~~~~~~adi~i~pS~~Eg~gl~~lEAma~G~PvI~s~~~~~~e~i~~------~~g~~G~~~~~~d~~~la~~i~~l~- 311 (352)
T Consensus 362 a~~i~agaD~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~~ 441 (487)
T COG0297 362 AHLIYAGADVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALV 441 (487)
T ss_pred HHHHHHCCCEEEECCCCCCCCHHHHHHHHCCCCCEECCCCCCCCEECCCCCHHCCCCEEEEEEECCCHHHHHHHHHHHHH
T ss_conf 99998449899957767687589999987188446754688654103766110037503799826998999999999999
Q ss_pred --CCHHH-HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC
Q ss_conf --69899-999999999999982998999999999999988609
Q gi|255764474|r 312 --NSKKI-MSDTGNRGRERAVKHFSIVKEASDIGKVYDRLLRTA 352 (352)
Q Consensus 312 --~~~~~-~~~~~~~a~~~~~~~fs~~~~a~~~~~iY~~~l~~a 352 (352)
T Consensus 442 ~y~~~~~~w~~~~~~~m---~~d~sw~~sa~~y~~lY~~~~~~~ 482 (487)
T COG0297 442 LYRAPPLLWRKVQPNAM---GADFSWDLSAKEYVELYKPLLSKP 482 (487)
T ss_pred HHHCCHHHHHHHHHHHC---CCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 96087899999998642---466680357888999999986466