HHsearch alignment for GI: 255764474 and conserved domain: COG0380
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism].
Probab=99.35 E-value=4.4e-10 Score=87.01 Aligned_cols=204 Identities=17% Similarity=0.221 Sum_probs=141.7
Q ss_pred CEEEECCCCCHHHHCCCCC-------HHHHHHHCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHCCCCCE----EEEE
Q ss_conf 8399748827778237843-------2687887288988727999512264451236665456530047740----5886
Q gi|255764474|r 134 PSTVIMHGVDTERFRPTSN-------KQEARRHLKISEDAKLIGCFGRIRKLKGTDLFVDCMINILPHHPGW----TAVV 202 (352)
Q Consensus 134 ~~~vi~~gid~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~----~l~i 202 (352)
T Consensus 245 ~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~--~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQ 322 (486)
T COG0380 245 KVGAFPIGIDPEEFERALKSPSVQEKVLELKAELG--RNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQ 322 (486)
T ss_pred EEEEEEEECCHHHHHHHHCCCCHHHHHHHHHHHHC--CCCEEEEEEHHCCCCCCCHHHHHHHHHHHHHCHHHHCCEEEEE
T ss_conf 89899401488999876168731567999999846--8866999740101246838999999999985856527468998
Q ss_pred ECCCCCCCCCHHHHHHHHHHHC-----CCCCCCCCCC--------CCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCE
Q ss_conf 3133321000146677644311-----2332212222--------22331000000000001233322222210000010
Q gi|255764474|r 203 VGKTTLKHYLFKKNLQRRIYAN-----GLKKRILFID--------EQSSIEDWYRALNIFVAPPLYEGFGLTPLEAMASG 269 (352)
Q Consensus 203 ~G~g~~~~~~~~~~l~~~i~~~-----~l~~~V~~~g--------~~~~~~~~~~~adi~i~pS~~Eg~gl~~lEAma~G 269 (352)
T Consensus 323 i~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakEyVa~q 402 (486)
T COG0380 323 IAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQ 402 (486)
T ss_pred ECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHCEEEECCCCCCCCHHHHHHHHHH
T ss_conf 41777556388999999999999998750078886416888625898899999963034453233454207788899861
Q ss_pred E----EEEECCCCCCCHHCCCCCCCEEEEECCCCHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
Q ss_conf 0----111027884101002348842499659998999999999986-98999999999999999829989999999999
Q gi|255764474|r 270 I----PVVASNTGVFSELLDPENAKAGVIVPPRNLHALEKAVLYFMN-SKKIMSDTGNRGRERAVKHFSIVKEASDIGKV 344 (352)
Q Consensus 270 ~----PvI~s~~~~~~e~i~~~~g~~G~~~~~~d~~~la~~i~~l~~-~~~~~~~~~~~a~~~~~~~fs~~~~a~~~~~i 344 (352)
T Consensus 403 ~~~~G~LiLSeFaGaa~~L~---~--AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~v~~-~d~~~W~~~fl~~ 476 (486)
T COG0380 403 RDKPGVLILSEFAGAASELR---D--ALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLT-HDVARWANSFLDD 476 (486)
T ss_pred CCCCCCEEEECCCCCHHHHC---C--CEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
T ss_conf 47897289852656555643---3--8767888769999999998459999999999999999986-1399999999999
Q ss_pred H
Q ss_conf 9
Q gi|255764474|r 345 Y 345 (352)
Q Consensus 345 Y 345 (352)
T Consensus 477 l 477 (486)
T COG0380 477 L 477 (486)
T ss_pred H
T ss_conf 8