HHsearch alignment for GI: 255764474 and conserved domain: COG0438
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane].
Probab=99.90 E-value=1.4e-21 Score=164.34 Aligned_cols=222 Identities=28% Similarity=0.528 Sum_probs=180.3
Q ss_pred HCCEEEECCHHHHHHC-----CCCEEEECCCCCHHHHCCCCCHHHHHHHCCCCCC--CCEEEEEEEECHHHHHHHHHHHH
Q ss_conf 2668998898999743-----6883997488277782378432687887288988--72799951226445123666545
Q gi|255764474|r 116 RMDEVITTSQKSARFI-----ERPSTVIMHGVDTERFRPTSNKQEARRHLKISED--AKLIGCFGRIRKLKGTDLFVDCM 188 (352)
Q Consensus 116 ~~d~ii~~s~~~~~~~-----~~~~~vi~~gid~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~G~~~~~Kg~~~li~a~ 188 (352)
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~ 221 (381)
T COG0438 150 LADRVIAVSPALKELLEALGVPNKIVVIPNGIDTEKFAPA--------RIGLLPEGGKFVVLYVGRLDPEKGLDLLIEAA 221 (381)
T ss_pred CCEEEEEECHHHHHHHHHHCCCCCEEEECCCCCHHHCCCC--------CCCCCCCCCCEEEEEECCCCCCCCHHHHHHHH
T ss_conf 4459999458889999984677887997588587874700--------01445356987999964886547999999999
Q ss_pred HHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC--CCCCCCHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 6530047740588631333210001466776443112332212222223--31000000000001233322222210000
Q gi|255764474|r 189 INILPHHPGWTAVVVGKTTLKHYLFKKNLQRRIYANGLKKRILFIDEQS--SIEDWYRALNIFVAPPLYEGFGLTPLEAM 266 (352)
Q Consensus 189 ~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~i~~~~l~~~V~~~g~~~--~~~~~~~~adi~i~pS~~Eg~gl~~lEAm 266 (352)
T Consensus 222 ~~~~~~~~~~~~~~~g~~~~~----~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~ 297 (381)
T COG0438 222 AKLKKRGPDIKLVIVGDGPER----REELEKLAKKLGLEDNVKFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAM 297 (381)
T ss_pred HHHHHHCCCEEEEEEEECCCH----HHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHH
T ss_conf 985321586489999953412----8899999997088887899177898999999972809991786445588999999
Q ss_pred CCEEEEEECCCCCCCHHCCCCCCCEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Q ss_conf 01001110278841010023488424996599989999999999869899999999999999982998999999999999
Q gi|255764474|r 267 ASGIPVVASNTGVFSELLDPENAKAGVIVPPRNLHALEKAVLYFMNSKKIMSDTGNRGRERAVKHFSIVKEASDIGKVYD 346 (352)
Q Consensus 267 a~G~PvI~s~~~~~~e~i~~~~g~~G~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~a~~~~~~~fs~~~~a~~~~~iY~ 346 (352)
T Consensus 298 a~g~pvi~~~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (381)
T COG0438 298 AAGTPVIASDVGGIPEVVE--DGETGLLVPPGDVEELADALEQLLEDPELREELGEAARERVEEEFSWERIAEQLLELYE 375 (381)
T ss_pred HHCCEEEECCCCCHHHHHC--CCCEEEEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_conf 8498699958998688430--69706998899999999999999869799999999999999986699999999999999
Q ss_pred HHHHH
Q ss_conf 98860
Q gi|255764474|r 347 RLLRT 351 (352)
Q Consensus 347 ~~l~~ 351 (352)
T Consensus 376 ~~~~~ 380 (381)
T COG0438 376 ELLAE 380 (381)
T ss_pred HHHHC
T ss_conf 98615