HHsearch alignment for GI: 255764474 and conserved domain: COG4641
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown].
Probab=98.18 E-value=3.6e-05 Score=53.92 Aligned_cols=303 Identities=11% Similarity=0.059 Sum_probs=165.1
Q ss_pred HHHHHHHHHHHCCEEEEEECCCCCCCCCC--------------CHHHHHHHHHHHHHCCCEEEEECCCH----HHHHHHH
Q ss_conf 88999999971985999805886656234--------------78998998875432597089962854----6899999
Q gi|255764474|r 24 VFGLCPIQRKLGQRLVVFGYCLPKNIPSI--------------GISSLLTCWKKPIGQNSRIWHARRNN----EMLLGVM 85 (352)
Q Consensus 24 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~ivh~~~~~----~~~~~~~ 85 (352)
T Consensus 20 ~~~~~~~l~~~g~kvlflE~~~~~~~k~rd~~~~~~~~~~~~~~~~e-~~~~~~i~~fk~d~iv~~~~~~~~~~~~~~~~ 98 (373)
T COG4641 20 YRGLLRALKMDGMKVLFLESGDFWDYKNRDIDAEDGCTEAFYKDQPE-LESLLYIREFKPDIIVNMSGDDQPDEESTIDL 98 (373)
T ss_pred HHHHHHHHHHCCCEEEEEECCCHHHHHCCCCCCCCCHHHEEECCCHH-HHHHHHHHHCCCCEEEEECCCCCCCCEEHHHH
T ss_conf 99999999856554899832627754064456765600100057478-99999898628747999515666441001799
Q ss_pred HHHHHCCCE--EEEECCHHHH--HHHHHHHHHH-HH----CCEEEECCHHH--HHHC----CCCEEEECCCCCHHHHCCC
Q ss_conf 999709981--9997574562--0113479899-62----66899889899--9743----6883997488277782378
Q gi|255764474|r 86 MRDVLRMPL--KLVFTSPSQR--NHSRWTRYLI-SR----MDEVITTSQKS--ARFI----ERPSTVIMHGVDTERFRPT 150 (352)
Q Consensus 86 ~~~~~~~~~--~~~~~~~~~~--~~~~~~~~l~-~~----~d~ii~~s~~~--~~~~----~~~~~vi~~gid~~~~~~~ 150 (352)
T Consensus 99 ~a~l~~~~l~~~~w~te~p~~~~~~~~~~~~~~~~~~l~~fd~v~~~g~~l~~~~yyq~~~~~~~~~~~~a~d~~~~~~i 178 (373)
T COG4641 99 WAWLKRKCLPVIVWYTEDPYDTDIFSQVAEEQLARRPLFIFDNVLSFGGGLVANKYYQEGGARNCYYLPWAVDDSLFHPI 178 (373)
T ss_pred HHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCEECCCCCCCCHHCCCC
T ss_conf 99852678626999714600246665301777610555133423312640788999876235511305756782320669
Q ss_pred CCHHHHHHHCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHCCCC-CEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCC
Q ss_conf 4326878872889887279995122644512366654565300477-405886313332100014667764431123322
Q gi|255764474|r 151 SNKQEARRHLKISEDAKLIGCFGRIRKLKGTDLFVDCMINILPHHP-GWTAVVVGKTTLKHYLFKKNLQRRIYANGLKKR 229 (352)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~-~~~l~i~G~g~~~~~~~~~~l~~~i~~~~l~~~ 229 (352)
T Consensus 179 ~~da~~~---------~dL~~ign~~pD-r~e~~ke~~~~ps~kl~v~rr~~~~g~~y~~------~~~~~----~~~~~ 238 (373)
T COG4641 179 PPDASYD---------VDLNLIGNPYPD-RVEEIKEFFVEPSFKLMVDRRFYVLGPRYPD------DIWGR----TWEPN 238 (373)
T ss_pred CCCCCCE---------EEEEEECCCCCC-HHHHHHHHHHCCCHHHHCCCEEEECCCCCCH------HHHCC----CCCCH
T ss_conf 8541301---------336773588855-7899999861520111006534550776523------44211----33656
Q ss_pred CCCCC---CCCCCCCCCHHHHHHCCCCCC---CC---CCCCCCCCCCCEEEEEECCCCCCCHHCCCCCCCEEEEECCCCH
Q ss_conf 12222---223310000000000012333---22---2222100000100111027884101002348842499659998
Q gi|255764474|r 230 ILFID---EQSSIEDWYRALNIFVAPPLY---EG---FGLTPLEAMASGIPVVASNTGVFSELLDPENAKAGVIVPPRNL 300 (352)
Q Consensus 230 V~~~g---~~~~~~~~~~~adi~i~pS~~---Eg---~gl~~lEAma~G~PvI~s~~~~~~e~i~~~~g~~G~~~~~~d~ 300 (352)
T Consensus 239 ~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~--pgk~--~iv~~d~ 314 (373)
T COG4641 239 VQYIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFK--PGKD--IIVYQDS 314 (373)
T ss_pred HHHHHCCCCCCHHHHCCCCCCEEEEECHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHCC--CCHH--EEEECCH
T ss_conf 66633268500000003554435641378887614785056888761587501542788987259--8602--5896378
Q ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999986989999999999999998299899999999999998860
Q gi|255764474|r 301 HALEKAVLYFMNSKKIMSDTGNRGRERAVKHFSIVKEASDIGKVYDRLLRT 351 (352)
Q Consensus 301 ~~la~~i~~l~~~~~~~~~~~~~a~~~~~~~fs~~~~a~~~~~iY~~~l~~ 351 (352)
T Consensus 315 kdl~~~~~yll~h~~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~sI~~r 365 (373)
T COG4641 315 KDLKEKLKYLLNHPDERKEIAECAYERVLARHTYEERIFKLLNEIASINIR 365 (373)
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 999999999844830689999866999987432788899999999999886