HHsearch alignment for GI: 255764474 and conserved domain: PRK01021
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed.
Probab=98.29 E-value=0.0002 Score=48.92 Aligned_cols=291 Identities=11% Similarity=0.055 Sum_probs=143.2
Q ss_pred HHHHHHHHHHHHCCEEEEEECCCCC-------------CCCCCCHHH-----------HHHHHHHHHHCCCEEEEECCCH
Q ss_conf 8889999999719859998058866-------------562347899-----------8998875432597089962854
Q gi|255764474|r 23 TVFGLCPIQRKLGQRLVVFGYCLPK-------------NIPSIGISS-----------LLTCWKKPIGQNSRIWHARRNN 78 (352)
Q Consensus 23 ~v~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~-----------~~~~~~~~~~~~~~ivh~~~~~ 78 (352)
T Consensus 241 lGa~Li~~Lk~~~P~i~F~GVGGp~M~~eGl~slf~me~lsVMG~~EVL~~lp~L~~~~~~l~~~i~~~~PD~~I~ID~P 320 (607)
T PRK01021 241 LGGNLLKEIKALYPDIRCFGVGGPQMRQEGLEPLFNMEEFQVSGFWEVLLSLFKLYYRYRKLYKTILKENPETVICIDFP 320 (607)
T ss_pred HHHHHHHHHHHHCCCCEEEECCHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 79999999985498988996377999876886124467710114899998899999999999999986199999995899
Q ss_pred H--HHHHHHHHHHHCCCEEEEECCHHH--HHHHHHHHHHHHHCCEEEECCHHHHHHCCC---CEEEECCCCCHHHHCCCC
Q ss_conf 6--899999999709981999757456--201134798996266899889899974368---839974882777823784
Q gi|255764474|r 79 E--MLLGVMMRDVLRMPLKLVFTSPSQ--RNHSRWTRYLISRMDEVITTSQKSARFIER---PSTVIMHGVDTERFRPTS 151 (352)
Q Consensus 79 ~--~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~d~ii~~s~~~~~~~~~---~~~vi~~gid~~~~~~~~ 151 (352)
T Consensus 321 dFNlrlak~lkk-~gi~ik~vhYVsPsVWAWr~~R~k~i~~~vD~~l~lfPFE~~~~~~~g~~~~yVGHPl~-e~i~~~~ 398 (607)
T PRK01021 321 DFHFLLIKKLRK-CGYKGKIIHYVCPSIWAWRPKRKTILEKYLDLLLLILPFEQGLFKNSPLRTVYLGHPLV-ETISNFQ 398 (607)
T ss_pred CCCHHHHHHHHH-CCCCCCEEEEECCCEEEECCCHHHHHHHHHHHHEECCCCCHHHHHCCCCCCEEECCCCH-HHCCCCC
T ss_conf 878899999997-28999868997883688662179999998867305267788999507998379789601-2022347
Q ss_pred CHHHHHHHCCCCCCCCEE-EEEE-EECHHHH-HHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCC
Q ss_conf 326878872889887279-9951-2264451-236665456530047740588631333210001466776443112332
Q gi|255764474|r 152 NKQEARRHLKISEDAKLI-GCFG-RIRKLKG-TDLFVDCMINILPHHPGWTAVVVGKTTLKHYLFKKNLQRRIYANGLKK 228 (352)
Q Consensus 152 ~~~~~~~~~~~~~~~~~i-~~~G-~~~~~Kg-~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~i~~~~l~~ 228 (352)
T Consensus 399 ~~~~~r~~l~~-~~k~IIALLPGSR~SEI~RlLPI~~~ai~~~-~l~~~~~~lV~~a~p~~----~~~i~e~l~~~~~~~ 472 (607)
T PRK01021 399 PCASWKEQLLP-SDKPIVAAFPGSRRGDILRNLTIQVQAFLAS-SLAQTHQLLVSSANPKY----DHLILDVLQQEGCLH 472 (607)
T ss_pred CCHHHHHHCCC-CCCCEEEEECCCCHHHHHHHHHHHHHHHHHH-HCCCCCEEEEECCCHHH----HHHHHHHHHHCCCCC
T ss_conf 74569986177-8898899908997899998749999999987-24467649995687668----899999998648988
Q ss_pred CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEC-CCCC------------------CCHHCCCCCC
Q ss_conf 21222222331000000000001233322222210000010011102-7884------------------1010023488
Q gi|255764474|r 229 RILFIDEQSSIEDWYRALNIFVAPPLYEGFGLTPLEAMASGIPVVAS-NTGV------------------FSELLDPENA 289 (352)
Q Consensus 229 ~V~~~g~~~~~~~~~~~adi~i~pS~~Eg~gl~~lEAma~G~PvI~s-~~~~------------------~~e~i~~~~g 289 (352)
T Consensus 473 ~~II~~--~~kyeam~aSDaALaAS-----GTATLE~ALagvPmVVaYKlnpLTyfIAK~LvKI~lp~vsLPNILagr~V 545 (607)
T PRK01021 473 SKIVPS--QFRYELMRECDCALAKC-----GTIVLETALNQTPTIVTCQLRPFDTFLAKYIFKILLPAYSLPNIILGSVI 545 (607)
T ss_pred CEECCC--HHHHHHHHHCCEEEECC-----CHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCHHHCCCCC
T ss_conf 457173--25899998588998887-----78999999838898999967827999999999725751211301169986
Q ss_pred CEEEE--ECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Q ss_conf 42499--65999899999999998698999999999999999
Q gi|255764474|r 290 KAGVI--VPPRNLHALEKAVLYFMNSKKIMSDTGNRGRERAV 329 (352)
Q Consensus 290 ~~G~~--~~~~d~~~la~~i~~l~~~~~~~~~~~~~a~~~~~ 329 (352)
T Consensus 546 VPElI~gQ~D~~PE~iAaAl~-lL~~p~~~ekq~~~c~~~~~ 586 (607)
T PRK01021 546 FPEFIGGKKDFHPEEVAAALD-ILKTSQSKEKQKEACRDLYK 586 (607)
T ss_pred CCCCCCCCCCCCHHHHHHHHH-HHHCHHHHHHHHHHHHHHHH
T ss_conf 666367766589899999999-87191567999999999999