HHsearch alignment for GI: 255764474 and conserved domain: TIGR02149
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family; InterPro: IPR011875 This entry describes Corynebacterium glutamicum GlgA and closely related proteins in other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related IPR011835 from INTERPRO, family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor ..
Probab=100.00 E-value=0 Score=362.59 Aligned_cols=339 Identities=22% Similarity=0.360 Sum_probs=270.4
Q ss_pred HEEEECCCCCCC-CCCHHHHHHHHHHHHHHH-CCEEEEEECCC-CCCCCC-------------CCHHHHHHHHH------
Q ss_conf 458970787878-770778888999999971-98599980588-665623-------------47899899887------
Q gi|255764474|r 5 NIDVIAPNMKFR-HTGVTSTVFGLCPIQRKL-GQRLVVFGYCL-PKNIPS-------------IGISSLLTCWK------ 62 (352)
Q Consensus 5 ~i~~i~~~~~~~-~~Gv~~~v~~~~~~~~~~-~~~~~~~~~~~-~~~~~~-------------~~~~~~~~~~~------ 62 (352)
T Consensus 2 kV~~LtrEYPP~vYGGAGVHv~~L~~~L~~l~~vdVr~fG~~rteadiPaiPna~~~~gsL~v~~Y~~~~~L~~GldPra 81 (416)
T TIGR02149 2 KVTLLTREYPPEVYGGAGVHVEELARELARLVDVDVRCFGDKRTEADIPAIPNAFFSEGSLKVLGYRPWSELKEGLDPRA 81 (416)
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHCCCCCHHH
T ss_conf 01242467878867887411888999998653400464388744233456662216898328874078743225677225
Q ss_pred -------------HHHHCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECC-----HHHHH-------HHHH-HHHHHHH
Q ss_conf -------------54325970899628546899999999709981999757-----45620-------1134-7989962
Q gi|255764474|r 63 -------------KPIGQNSRIWHARRNNEMLLGVMMRDVLRMPLKLVFTS-----PSQRN-------HSRW-TRYLISR 116 (352)
Q Consensus 63 -------------~~~~~~~~ivh~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-------~~~~-~~~l~~~ 116 (352)
T Consensus 82 n~aL~tfSvDL~m~~d~~~~~vvHsHTWYa~LAG~LAk~Lyd~PlVvTaHSLEPLRPWK~EQLGgGY~lSsW~EktA~~a 161 (416)
T TIGR02149 82 NKALKTFSVDLAMANDVEDADVVHSHTWYAALAGHLAKLLYDVPLVVTAHSLEPLRPWKKEQLGGGYKLSSWAEKTAIEA 161 (416)
T ss_pred HHHHCCHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHCCCCCCCCHHHHHHHHHH
T ss_conf 75402311578876110027155320788878999999966998399730378887131756589742024788889985
Q ss_pred CCEEEECCHHHHHHC--------CCCEEEECCCCCHHHHCCC--CCHHHHHHHCCCCCCCCEEEEEEEECHHHHHHHHHH
Q ss_conf 668998898999743--------6883997488277782378--432687887288988727999512264451236665
Q gi|255764474|r 117 MDEVITTSQKSARFI--------ERPSTVIMHGVDTERFRPT--SNKQEARRHLKISEDAKLIGCFGRIRKLKGTDLFVD 186 (352)
Q Consensus 117 ~d~ii~~s~~~~~~~--------~~~~~vi~~gid~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~ 186 (352)
T Consensus 162 Ad~vIAVS~amr~DiL~~YP~lD~~kv~Vv~NGId~~~y~~~~~~~~~~v~~~~Gid~~rP~~lFVGRItRQKGv~~L~~ 241 (416)
T TIGR02149 162 ADRVIAVSGAMREDILKVYPDLDPEKVHVVYNGIDTKEYKPAADDDGNKVLDRYGIDRSRPYVLFVGRITRQKGVPHLLK 241 (416)
T ss_pred CCCEEEHHHHCHHHHHCCCCCCCCCCEEEEECCCCHHHHCCCCCCCHHHHHHHHCCCCCCCEEEEEEEEECCCCHHHHHH
T ss_conf 04065311103355831586888464688864764576068888741134663267998887898520203165589999
Q ss_pred HHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCC-CCCCCCCCC---CCCCCCCCHHHHHHCCCCCCCCCCCCC
Q ss_conf 4565300477405886313332100014667764431123-322122222---233100000000000123332222221
Q gi|255764474|r 187 CMINILPHHPGWTAVVVGKTTLKHYLFKKNLQRRIYANGL-KKRILFIDE---QSSIEDWYRALNIFVAPPLYEGFGLTP 262 (352)
Q Consensus 187 a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~i~~~~l-~~~V~~~g~---~~~~~~~~~~adi~i~pS~~Eg~gl~~ 262 (352)
T Consensus 242 A~~~~~---~dvqvVLCAga-pDTPEv~~Ev~~~~a~l~~~R~gv~WI~~ml~~~~~~~L~~~A~vFvCPSvYEPLGIvN 317 (416)
T TIGR02149 242 AVHLIS---KDVQVVLCAGA-PDTPEVAEEVRQAVAKLDREREGVIWIEKMLPKEELVELLSNAEVFVCPSVYEPLGIVN 317 (416)
T ss_pred HHHHCC---CCCEEEEECCC-CCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHCCCEEECCCCCCCCCHHH
T ss_conf 996255---20359870676-78720689999999988761698386356588789999984694786484425420556
Q ss_pred CCCCCCEEEEEECCCCCCCHHCCCCCCCEEEEECCCC-------------H-HHHHHHHHHHHCCHHHHHHHHHHHHHHH
Q ss_conf 0000010011102788410100234884249965999-------------8-9999999999869899999999999999
Q gi|255764474|r 263 LEAMASGIPVVASNTGVFSELLDPENAKAGVIVPPRN-------------L-HALEKAVLYFMNSKKIMSDTGNRGRERA 328 (352)
Q Consensus 263 lEAma~G~PvI~s~~~~~~e~i~~~~g~~G~~~~~~d-------------~-~~la~~i~~l~~~~~~~~~~~~~a~~~~ 328 (352)
T Consensus 318 LEAMAC~tpVVAS~~GGIpEVV~--dg~TG~LV~~~~lhdGtGtP~d~d~f~~~LA~ai~~ll~dp~~A~k~G~aGr~R~ 395 (416)
T TIGR02149 318 LEAMACGTPVVASAVGGIPEVVV--DGETGFLVPIDDLHDGTGTPDDDDKFEADLAKAIDALLADPELAKKMGEAGRKRA 395 (416)
T ss_pred HHHHHCCCCEEECCCCCCCCEEE--CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCHHHHHHH
T ss_conf 87885078634403689552683--3744312470145577888887405689999999997429578988344346554
Q ss_pred HHHCCHHHHHHHHHHHHHHHH
Q ss_conf 982998999999999999988
Q gi|255764474|r 329 VKHFSIVKEASDIGKVYDRLL 349 (352)
Q Consensus 329 ~~~fs~~~~a~~~~~iY~~~l 349 (352)
T Consensus 396 ~~~FSW~~iA~kT~~~Y~~v~ 416 (416)
T TIGR02149 396 VEEFSWESIAKKTVELYRKVL 416 (416)
T ss_pred HHCCCHHHHHHHHHHHHHHCC
T ss_conf 212575789999999987419