HHsearch alignment for GI: 255764476 and conserved domain: COG4564
>COG4564 Signal transduction histidine kinase [Signal transduction mechanisms].
Probab=99.21 E-value=5.7e-09 Score=79.33 Aligned_cols=180 Identities=16% Similarity=0.196 Sum_probs=122.6
Q ss_pred HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC---HHHHHHHHHHHHH
Q ss_conf 5899999999973577788998999999999999999999999999998851498300023306---9999999999999
Q gi|255764476|r 583 PLTNIIGFTDLLKTSKLGSLNSKQSQYVEYISASSTILLNLVNDILDLATVDAGIMKLNYSTIV---LNDLLNEVKQSIA 659 (792)
Q Consensus 583 PLt~I~G~a~lL~~~~~g~l~~~q~e~~~~I~~s~~~l~~li~diLdls~i~aG~~~l~~~~vd---l~~~i~~~~~~~~ 659 (792)
T Consensus 265 ~LVs~k~~lela~~ql~~p---~~-~a~~aieKaa~aL~~Ai~EVRRiSH------~LRP~~LDDLGL~aALe~---L~~ 331 (459)
T COG4564 265 NLVSVKCALELAARQLNPP---KG-GAHPAIEKAADALNGAIKEVRRISH------DLRPRALDDLGLTAALEA---LLE 331 (459)
T ss_pred HHHHHHHHHHHHHCCCCCC---CC-CCCHHHHHHHHHHHHHHHHHHHHCC------CCCHHHHHHHHHHHHHHH---HHH
T ss_conf 7799999999996267799---88-8750156678999989999998502------357455544307999999---999
Q ss_pred HHHHHCCCEEEEEECCCCCEEE-ECHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCEEEEEEEECCCCCCHHHHHHH
Q ss_conf 9998489689999569860899-878999999999988677538886889999998799899999978897897786541
Q gi|255764476|r 660 TKMHENNIRIKVISDGKLGSFV-ADRQRLLQIFSKILSNAMDFSSKGSTVILKAARDNGDFIFSVKNNGSSIPEDMCKSV 738 (792)
Q Consensus 660 ~~~~~~~i~l~~~~~~~~~~v~-~D~~rL~QVl~NLl~NAik~~~~gg~I~i~~~~~~~~v~i~V~D~G~GI~~e~~~ri 738 (792)
T Consensus 332 ~f~~~tg~~itle~~~~p~~l~~e~~talyRv~QEaltNIErHa-~Atrv~ill~~~~d~vql~vrDnG~GF~~~~~~-- 408 (459)
T COG4564 332 DFKERTGIEITLEFDTQPGKLKPEVATALYRVVQEALTNIERHA-GATRVTILLQQMGDMVQLMVRDNGVGFSVKEAL-- 408 (459)
T ss_pred HHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCEEEEEEECCCCCCEEEEEECCCCCCCCHHHC--
T ss_conf 86436683799970578644782788899999999987788606-871799986157760699982389985616531--
Q ss_pred CCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEECC
Q ss_conf 48837626898888566379999999996198699997889943999997347
Q gi|255764476|r 739 FNRFVSNAHRGQRRGVGLGLSIVESFINLHGGHVSISSSDEGVTTINCRIPSK 791 (792)
Q Consensus 739 F~~F~~~~~~~~~~GtGLGLsiv~~iVe~hgG~I~v~S~~G~Gttf~v~lP~~ 791 (792)
T Consensus 409 --------~--~--~~GiGLRNMrERma~~GG~~~v~s~p~-GTel~v~Lp~~ 448 (459)
T COG4564 409 --------Q--K--RHGIGLRNMRERMAHFGGELEVESSPQ-GTELTVLLPLD 448 (459)
T ss_pred --------C--C--CCCCCCCCHHHHHHHHCCEEEEEECCC-CCEEEEEECCH
T ss_conf --------6--7--556451009999997486589975698-72799981404