HHsearch alignment for GI: 255764476 and conserved domain: PRK09776
>PRK09776 putative sensor protein; Provisional.
Probab=100.00 E-value=9.1e-32 Score=235.47 Aligned_cols=367 Identities=15% Similarity=0.080 Sum_probs=240.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEECHHHHHHHCCCCCCHHHHHCCCC-CCCCHHH----HH
Q ss_conf 999999999999999999999998516800589815992898525789873677877566101585-3389678----99
Q gi|255764476|r 176 SELAETTLKCKKLSNHISVFKVLFDSLDFLVWHRDQAGDILWANISYKKNTETEGIVFQKAIGESR-KLFKEEI----KK 250 (792)
Q Consensus 176 ~~~ael~~~~~~L~~~~~~lr~llda~P~~vw~~D~dGri~~vN~A~~~~~e~~~~~~~~~i~~~~-~ll~~~~----~~ 250 (792)
T Consensus 287 ~~~~~~r~~~~~l~~SE~rfR~~~e~saiGmAlV~~dGr~l~VN~alc~mlG---Ys~~ELl~ltf~diThPdDl~~dl~ 363 (1116)
T PRK09776 287 MVMYAFRAERKHISESETRFRNAMEYSAIGMALVGTEGQWLQVNKALCQFLG---YSQEELRGLTFQQLTWPEDLNKDLQ 363 (1116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEECHHHHHHHC---CCHHHHHHCCHHHHCCCCCHHHHHH
T ss_conf 9999999888887767999999987466646998689818981699998849---8999985298988169621777899
Q ss_pred HHHHHCCCC--CEEEEEEEEEECCEEEEEEEEEEEC--CCC----EEEEEEEHHHHHHHHHHHHHHHHHH----HHCCCC
Q ss_conf 998612578--7034578886569078999997632--895----2999830458999887889999998----430895
Q gi|255764476|r 251 RMISSSALE--KNFCETVSTLEHGNNKSYKIVRVLN--SFG----EAGIAIDVSKEITVNDQLTHTYEIL----HNLTVA 318 (792)
Q Consensus 251 ~~~~~~~~~--~~~~~~~~~~~~G~rr~~~v~~~~~--~~G----~~Gia~DITErk~ae~aLrr~~e~L----d~l~~~ 318 (792)
T Consensus 364 ~~~~LlaGei~~y~lEKRyirkDG~~vW~~ltvSlvRd~~G~p~~fI~~v~DIterK~aE~~lr~l~erl~la~ea~~iG 443 (1116)
T PRK09776 364 QVEKLLSGEINSYSMEKRYYNRDGDVVWALLAVSLVRDTDGTPLYFIAQIEDINELKRTEQVNERLMERITLANEAGGIG 443 (1116)
T ss_pred HHHHHHCCCCCCCCCEEEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999769966454112467369979999989999976999844899999733377999999999999999998624766
Q ss_pred EEEECCCCEEEEECHHHHHHHCCCHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCC--CEEEECCC
Q ss_conf 9998489808985368885509997896049987999998975477766465788999999876246765--02688789
Q gi|255764476|r 319 IAIFDQNRYLQFHNRSFVELWEIDLAFLATNPSNDELLEFLRSANKLPEQLNWKTWKENIFSVYKSSETH--KDTWHLPN 396 (792)
Q Consensus 319 v~ifd~~~rl~~~N~a~~~l~gl~~~~l~~~p~~~~~ld~lr~~~~lpe~~d~~~w~~~~~~~~~~~~~~--~~~w~l~D 396 (792)
T Consensus 444 iwe~d~~~~~i~~~~r~~~l~g~~~~~---~~~~~~w~~~i-----hPdD~--~~v~~~~~~~l~~~~~~d~E~Rl~~~d 513 (1116)
T PRK09776 444 IWEWDLKPNIISWDKRMFELYEIPPHI---KPNWQVWYACL-----HPEDR--QRVEKEIRDALQGRSPFKLEFRIVVPD 513 (1116)
T ss_pred EEEEECCCCCEECCHHHHHHHCCCCCC---CCCHHHHHHHC-----CHHHH--HHHHHHHHHHHHCCCCCCCEEEEECCC
T ss_conf 355205665021137899984888222---66889998723-----91568--999999999971588756046788479
Q ss_pred CCEEEEEE--E--ECCCCC---EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEECHHHHHHHCC
Q ss_conf 81899997--3--569986---8999459579999999999999999999962034328996898488640588878289
Q gi|255764476|r 397 GQTLHVIV--T--SNPRGG---TIWMFENLTVQVDLETKYNTLVKVQGETIDHLSEGVAVFGPDGRIKLSNPAFRSLWKT 469 (792)
Q Consensus 397 Gr~l~v~~--~--~~p~Gg---~~~~~~DITE~~~le~~~~~l~~~q~~~ld~l~e~vav~~~dgr~~~~N~a~~~l~g~ 469 (792)
T Consensus 514 G~~r~i~~~a~~~~d~~G~~~r~~G~~~DITe~K~~eeaL~e~~erl~~~l~si~d~vi~tD~~~ri~~~Npaae~~tG~ 593 (1116)
T PRK09776 514 GEIRHIRALANRVLNKDGEVERLLGINMDMTEVRQLNEALFEEKERLHITLDSIGEAVVCTDAAMKVTFMNPVAEKMTGW 593 (1116)
T ss_pred CCEEEEEEEEEEEECCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEECHHHHHHHCC
T ss_conf 97899986214898689988988731323207789999999999999999834022489973788678886999998298
Q ss_pred CHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCEEE--EEEEEEECCC--C---CEEEEC
Q ss_conf 87894389838898877763025611468899874026544311568999725038--8899997058--8---766312
Q gi|255764476|r 470 EENRLSPGTHIRNIAATCSRYYNESDGWDLFAAIITSFDDERKSLQGTLELLSDSV--LEYSIIPLPN--A---QTMLTF 542 (792)
Q Consensus 470 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~dG~~--~~~~~~pl~d--g---~~l~~~ 542 (792)
T Consensus 594 ~~~e~~G~~~-~~v~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~G~~~~v~~s~~pi~~~~g~~~g~V~v~ 671 (1116)
T PRK09776 594 TQEEALGVPL-LTVLHITFGD-NGPLMENPVEICLADTSRSYLEQDVVLHSRSGGSYDVQYSIAPLSTLDGENIGSVLVF 671 (1116)
T ss_pred CHHHHCCCCH-HHHHHCCCCC-CCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCEEEEEEEE
T ss_conf 8799849987-8970036644-2111121999997407873312353688269968999973045134778554479852
Q ss_pred CCCHHHHHHHHHHHH
Q ss_conf 320689999888899
Q gi|255764476|r 543 VNVTDSVRAERALTE 557 (792)
Q Consensus 543 ~DIT~~k~~E~aL~e 557 (792)
T Consensus 672 ~Dit~~k~~~~~l~~ 686 (1116)
T PRK09776 672 QDVTESRAMLRQLSY 686 (1116)
T ss_pred CCHHHHHHHHHHHHH
T ss_conf 012299999999987