HHsearch alignment for GI: 255764476 and conserved domain: PRK10600
>PRK10600 nitrate/nitrite sensor protein NarX; Provisional.
Probab=99.72 E-value=7.5e-14 Score=112.75 Aligned_cols=185 Identities=17% Similarity=0.222 Sum_probs=134.7
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHH
Q ss_conf 63225899999999973577788998999999999999999999999999998851498300023306999999999999
Q gi|255764476|r 579 ELRSPLTNIIGFTDLLKTSKLGSLNSKQSQYVEYISASSTILLNLVNDILDLATVDAGIMKLNYSTIVLNDLLNEVKQSI 658 (792)
Q Consensus 579 ELrtPLt~I~G~a~lL~~~~~g~l~~~q~e~~~~I~~s~~~l~~li~diLdls~i~aG~~~l~~~~vdl~~~i~~~~~~~ 658 (792)
T Consensus 372 slaQ~Ls~Lkiq~~~l~~~~-~~~~~~~~~~l~~i~~~~~~a~~~lReLl~~fR~-------~l~~~~l~~aL~~~i~~~ 443 (569)
T PRK10600 372 SIAQSLSCMKMQVSCLQMQG-DALPESSRELLSQIRNELNASWAQLRELLTTFRL-------QLTEPGLRPALEASCEEF 443 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------CCCCCCHHHHHHHHHHHH
T ss_conf 87222789999999999730-5798889999999999999999999999998355-------777566799999999999
Q ss_pred HHHHHHCCCEEEEEECCCCCEEEE-CHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCEEEEEEEECCCCCCHHHHHH
Q ss_conf 999984896899995698608998-7899999999998867753888688999999879989999997889789778654
Q gi|255764476|r 659 ATKMHENNIRIKVISDGKLGSFVA-DRQRLLQIFSKILSNAMDFSSKGSTVILKAARDNGDFIFSVKNNGSSIPEDMCKS 737 (792)
Q Consensus 659 ~~~~~~~~i~l~~~~~~~~~~v~~-D~~rL~QVl~NLl~NAik~~~~gg~I~i~~~~~~~~v~i~V~D~G~GI~~e~~~r 737 (792)
T Consensus 444 ~~---~~g~~i~l~~~~~~~~l~~~~~i~l~rIvqEALsNv~KHA~A~-~v~V~l~~~~~~~~l~I~DdG~Gf~~~~--- 516 (569)
T PRK10600 444 SA---RFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHAQAS-EVVVTVAQNDNQVKLSVQDNGCGVPENA--- 516 (569)
T ss_pred HH---HCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC-EEEEEEEECCCEEEEEEEECCCCCCCCC---
T ss_conf 97---6097799995588667987899999999999999999708998-7999999769989999988998989888---
Q ss_pred HCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEECC
Q ss_conf 148837626898888566379999999996198699997889943999997347
Q gi|255764476|r 738 VFNRFVSNAHRGQRRGVGLGLSIVESFINLHGGHVSISSSDEGVTTINCRIPSK 791 (792)
Q Consensus 738 iF~~F~~~~~~~~~~GtGLGLsiv~~iVe~hgG~I~v~S~~G~Gttf~v~lP~~ 791 (792)
T Consensus 517 -----------~--~~~h~GL~iMrERa~~lgG~l~i~s~p~~GT~V~l~f~P~ 557 (569)
T PRK10600 517 -----------E--RSNHYGLIIMRDRAQSLRGDCSVRRRESGGTEVVVTFIPE 557 (569)
T ss_pred -----------C--CCCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEEECCC
T ss_conf -----------8--8999781599999997699899986699958999997589