HHsearch alignment for GI: 255764476 and conserved domain: PRK10815
>PRK10815 sensor protein PhoQ; Provisional.
Probab=100.00 E-value=0 Score=340.64 Aligned_cols=221 Identities=17% Similarity=0.271 Sum_probs=194.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
Q ss_conf 99999999999999666632258999999999735777889989999999999999999999999999988514983000
Q gi|255764476|r 562 LRKADEIKNSFVQHVSYELRSPLTNIIGFTDLLKTSKLGSLNSKQSQYVEYISASSTILLNLVNDILDLATVDAGIMKLN 641 (792)
Q Consensus 562 le~a~~lk~~F~~~vSHELrtPLt~I~G~a~lL~~~~~g~l~~~q~e~~~~I~~s~~~l~~li~diLdls~i~aG~~~l~ 641 (792)
T Consensus 259 l~~~~~rqr~F~adaSHELRTPLa~l~~~le~L~~~~---~~~~~~--~~~~le~i~Rl~~li~~lL~~a~~~~~~~~~~ 333 (484)
T PRK10815 259 ERERYDKYRTTLTDLTHSLKTPLAVLQSTLRSLRTEK---MSVSDA--EPVMLEQISRISQQIGYYLHRASMRGEGTLLS 333 (484)
T ss_pred HHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHCCC---CCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 9999999999985443643456999999999974699---887899--99999999999999999999987038986302
Q ss_pred EEEECHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCEEEE
Q ss_conf 23306999999999999999984896899995698608998789999999999886775388868899999987998999
Q gi|255764476|r 642 YSTIVLNDLLNEVKQSIATKMHENNIRIKVISDGKLGSFVADRQRLLQIFSKILSNAMDFSSKGSTVILKAARDNGDFIF 721 (792)
Q Consensus 642 ~~~vdl~~~i~~~~~~~~~~~~~~~i~l~~~~~~~~~~v~~D~~rL~QVl~NLl~NAik~~~~gg~I~i~~~~~~~~v~i 721 (792)
T Consensus 334 ~e~~~l~~ll~~l~~~l~~~~~~k~i~l~~~~~~~~-~~~gd~~~l~~~l~NLldNAikys~~~--v~I~~~~~~~~~~I 410 (484)
T PRK10815 334 RELHPVAPLLDNLTSALNKVYQRKGVNISLDISPEI-SFVGEQNDFMEVMGNVLDNACKYCLEF--VEISARQTDEHLHI 410 (484)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCE-EEECCHHHHHHHHHHHHHHHHHHCCCC--EEEEEEEECCEEEE
T ss_conf 555669999999999999999964977999648760-795578999999999999999728886--79999996999999
Q ss_pred EEEECCCCCCHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEECCC
Q ss_conf 99978897897786541488376268988885663799999999961986999978899439999973479
Q gi|255764476|r 722 SVKNNGSSIPEDMCKSVFNRFVSNAHRGQRRGVGLGLSIVESFINLHGGHVSISSSDEGVTTINCRIPSKE 792 (792)
Q Consensus 722 ~V~D~G~GI~~e~~~riF~~F~~~~~~~~~~GtGLGLsiv~~iVe~hgG~I~v~S~~G~Gttf~v~lP~~e 792 (792)
T Consensus 411 ~V~D~GpGIp~e~~~~IFeRF~R~d~~--r~GsGLGLaIvk~Iv~~hgG~I~l~~s~~gG~~f~I~F~~~~ 479 (484)
T PRK10815 411 VVEDDGPGIPESKRELIFDRGQRVDTL--RPGQGVGLAVAREITEQYEGKIVASESPLGGARMEVIFGRQH 479 (484)
T ss_pred EEEECCCCCCHHHHHHHCCCCCCCCCC--CCCCCHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEECCCC
T ss_conf 999739999989998624688779999--998576799999999988998999956999248999973877