HHsearch alignment for GI: 255764476 and conserved domain: PRK10841
>PRK10841 hybrid sensory kinase in two-component regulatory system with RcsB and YojN; Provisional.
Probab=97.85 E-value=0.0009 Score=43.71 Aligned_cols=114 Identities=15% Similarity=0.200 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCEEEEC-CCCCEEEECHHHHHHHCCCCCCHHHHHCCCCCCCCHHHHHHHHHHCCCCC
Q ss_conf 99999999999999999851680058981-59928985257898736778775661015853389678999986125787
Q gi|255764476|r 182 TLKCKKLSNHISVFKVLFDSLDFLVWHRD-QAGDILWANISYKKNTETEGIVFQKAIGESRKLFKEEIKKRMISSSALEK 260 (792)
Q Consensus 182 ~~~~~~L~~~~~~lr~llda~P~~vw~~D-~dGri~~vN~A~~~~~e~~~~~~~~~i~~~~~ll~~~~~~~~~~~~~~~~ 260 (792)
T Consensus 346 ~~~a~~l~e~e~fnr~~i~~apvg~~~l~~~dg~~~~~n~~~~~~~---------------~~~~~~~~~~~~~~~~~~~ 410 (947)
T PRK10841 346 ESNALRLEEHEQFNRKIVASAPVGICILRTSDGTNILSNELAHNYL---------------NMLTHEDRQRLTQIICGQQ 410 (947)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECHHHHHHHH---------------HHCCCCHHHHHHHHHHCCC
T ss_conf 6778899878887788986177137999706886331038999987---------------6237552899999986137
Q ss_pred -EEEEEEEEEECCEEEEEEEEEEECCC----CEEEEEEEHHHHHHHHHHHHHHHHHHHH
Q ss_conf -03457888656907899999763289----5299983045899988788999999843
Q gi|255764476|r 261 -NFCETVSTLEHGNNKSYKIVRVLNSF----GEAGIAIDVSKEITVNDQLTHTYEILHN 314 (792)
Q Consensus 261 -~~~~~~~~~~~G~rr~~~v~~~~~~~----G~~Gia~DITErk~ae~aLrr~~e~Ld~ 314 (792)
T Consensus 411 ~~~~~----~~~~~~~~l~~~~~~~ry~~~~v~~c~~~Disar~~~e~~L~~a~~AAE~ 465 (947)
T PRK10841 411 VNFVD----VLTSNNTNLQISFVHSRYRNENVAICVLVDVSARVKMEESLQEMAQAAEQ 465 (947)
T ss_pred CCCEE----EEECCCCEEEEEEEEEEECCCCEEEEEEEECHHHHHHHHHHHHHHHHHHH
T ss_conf 88348----99359857999986531268607999998540789999999999999999