HHsearch alignment for GI: 255764476 and conserved domain: PRK11073

>PRK11073 glnL nitrogen regulation protein NR(II); Provisional.
Probab=100.00  E-value=0  Score=429.15  Aligned_cols=327  Identities=20%  Similarity=0.330  Sum_probs=260.1

Q ss_pred             HHHHHHHCCCCEEEECCCCEEEEECHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEE
Q ss_conf             99999620343289968984886405888782898789438983889887776302561146889987402654431156
Q gi|255764476|r  436 QGETIDHLSEGVAVFGPDGRIKLSNPAFRSLWKTEENRLSPGTHIRNIAATCSRYYNESDGWDLFAAIITSFDDERKSLQ  515 (792)
Q Consensus       436 q~~~ld~l~e~vav~~~dgr~~~~N~a~~~l~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~r~~~~  515 (792)
T Consensus         9 ~~~Il~~~~d~Iiv~D~~g~I~~~N~aa~~l~g~~~~~~~G~~-~~~l~~~~----~~--~~~~~~~~~~~~~~-~~~~~   80 (348)
T PRK11073          9 AGQILNSLINSILLLDDNLAIHYANPAAQQLLAQSSRKLFGTP-LPELLSYF----SL--NIELMQESLQAGQG-FTDNE   80 (348)
T ss_pred             HHHHHHHHHHHHEEECCCCCEEEECHHHHHHHCCCHHHHCCCC-HHHHHCCC----CC--CHHHHHHHHHCCCC-CCCCE
T ss_conf             9999986607964998979701283999999785989985996-89984665----30--18999999973897-41323


Q ss_pred             EEEEECCEE--EEEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             899972503--888999970588766312320689999888899999999999999999999666632258999999999
Q gi|255764476|r  516 GTLELLSDS--VLEYSIIPLPNAQTMLTFVNVTDSVRAERALTEKNEALRKADEIKNSFVQHVSYELRSPLTNIIGFTDL  593 (792)
Q Consensus       516 ~~~~~~dG~--~~~~~~~pl~dg~~l~~~~DIT~~k~~E~aL~e~~eale~a~~lk~~F~~~vSHELrtPLt~I~G~a~l  593 (792)
T Consensus        81 ~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~di~~~k~l~~e~~~~~~~-----~~~~e~~~~iaHelrnPL~~I~g~~~l  154 (348)
T PRK11073         81 VTL-VIDGRSHILSLTAQRLPEGMILLEMAPMDNQRRLSQEQLQHAQQ-----VAARDLVRGLAHEIKNPLGGLRGAAQL  154 (348)
T ss_pred             EEE-EECCEEEEEEEEEEECCCCEEEEEEEECHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf             999-98996999999999825868999999627999999999999999-----999999984018747857999999999


Q ss_pred             HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf             73577788998999999999999999999999999998851498300023306999999999999999984896899995
Q gi|255764476|r  594 LKTSKLGSLNSKQSQYVEYISASSTILLNLVNDILDLATVDAGIMKLNYSTIVLNDLLNEVKQSIATKMHENNIRIKVIS  673 (792)
Q Consensus       594 L~~~~~g~l~~~q~e~~~~I~~s~~~l~~li~diLdls~i~aG~~~l~~~~vdl~~~i~~~~~~~~~~~~~~~i~l~~~~  673 (792)
T Consensus       155 l~~~~---~d~~~~e~~~~i~~~~~rl~~li~~ll~~~~~~~------~~~~~l~~~~~~~~~~~~~~~-~~~i~i~~~~  224 (348)
T PRK11073        155 LSKAL---PDPALTEYTKVIIEQADRLRNLVDRLLGPQRPGT------HITESIHKVAERVVQLVSLEL-PDNVRLIRDY  224 (348)
T ss_pred             HHHHC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC------CCCCCHHHHHHHHHHHHHHHC-CCCCEEEEEE
T ss_conf             97417---9989999999999999999999999864412688------775479999999999999856-5780999960


Q ss_pred             CCCCCEEEECHHHHHHHHHHHHHHHHHC-CCCCCEEEEEEEEEC----------CEEEEEEEECCCCCCHHHHHHHCCCC
Q ss_conf             6986089987899999999998867753-888688999999879----------98999999788978977865414883
Q gi|255764476|r  674 DGKLGSFVADRQRLLQIFSKILSNAMDF-SSKGSTVILKAARDN----------GDFIFSVKNNGSSIPEDMCKSVFNRF  742 (792)
Q Consensus       674 ~~~~~~v~~D~~rL~QVl~NLl~NAik~-~~~gg~I~i~~~~~~----------~~v~i~V~D~G~GI~~e~~~riF~~F  742 (792)
T Consensus       225 ~~~~~~i~~d~~~l~qVl~NLl~NAik~~~~~~g~i~i~~~~~~~~~i~~~~~~~~~~i~V~D~G~GI~~e~~~~iF~pf  304 (348)
T PRK11073        225 DPSLPELAHDPDQIEQVLLNIVRNALQALGPEGGEITLRTRTAFQLTLHGERYRLAARIDIEDNGPGIPPHLQDTLFYPM  304 (348)
T ss_pred             CCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHCCCC
T ss_conf             78887264468788999999999999983669977999996433322145323304899999908878989999737783


Q ss_pred             EECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEECC
Q ss_conf             7626898888566379999999996198699997889943999997347
Q gi|255764476|r  743 VSNAHRGQRRGVGLGLSIVESFINLHGGHVSISSSDEGVTTINCRIPSK  791 (792)
Q Consensus       743 ~~~~~~~~~~GtGLGLsiv~~iVe~hgG~I~v~S~~G~Gttf~v~lP~~  791 (792)
T Consensus       305 ~ttk~----~GtGLGL~ivk~ive~hgG~I~v~S~~g~-t~F~i~lPl~  348 (348)
T PRK11073        305 VSGRE----GGTGLGLSIARNLIDQHSGKIEFTSWPGH-TEFSVYLPIR  348 (348)
T ss_pred             CCCCC----CCCCHHHHHHHHHHHHCCCEEEEEEECCE-EEEEEEEEEC
T ss_conf             67998----98177899999999986998999982891-9999999639