HHsearch alignment for GI: 255764476 and conserved domain: PRK11107
>PRK11107 hybrid sensory histidine kinase BarA; Provisional.
Probab=100.00 E-value=0 Score=481.32 Aligned_cols=233 Identities=28% Similarity=0.476 Sum_probs=212.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999999999999999999966663225899999999973577788998999999999999999999999999998851
Q gi|255764476|r 555 LTEKNEALRKADEIKNSFVQHVSYELRSPLTNIIGFTDLLKTSKLGSLNSKQSQYVEYISASSTILLNLVNDILDLATVD 634 (792)
Q Consensus 555 L~e~~eale~a~~lk~~F~~~vSHELrtPLt~I~G~a~lL~~~~~g~l~~~q~e~~~~I~~s~~~l~~li~diLdls~i~ 634 (792)
T Consensus 279 l~~ak~~A~~A~r~Ks~FLAnmSHEiRTPLn~IiG~~~ll~~~---~l~~~q~~~l~~i~~s~~~Ll~lIndiLD~SkiE 355 (920)
T PRK11107 279 LDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRQTLKT---PLTPTQRDYLQTIERSANNLLAIINDILDFSKLE 355 (920)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCHHHHCHHHHHHHHHHHHHHCC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999966486542199999999998569---9999999999999999999999999999999984
Q ss_pred CCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCE-EEECHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE
Q ss_conf 498300023306999999999999999984896899995698608-9987899999999998867753888688999999
Q gi|255764476|r 635 AGIMKLNYSTIVLNDLLNEVKQSIATKMHENNIRIKVISDGKLGS-FVADRQRLLQIFSKILSNAMDFSSKGSTVILKAA 713 (792)
Q Consensus 635 aG~~~l~~~~vdl~~~i~~~~~~~~~~~~~~~i~l~~~~~~~~~~-v~~D~~rL~QVl~NLl~NAik~~~~gg~I~i~~~ 713 (792)
T Consensus 356 ag~l~le~~~f~l~~~~~~v~~~~~~~a~~k~l~l~~~~~~~~p~~v~gD~~Rl~QIl~NLl~NAiKfT~~G~-I~v~v~ 434 (920)
T PRK11107 356 AGKLILENIPFSLRETLDEVVTLLAHSAHEKGLELTLNIDPDVPDNVIGDPLRLQQIITNLVGNAIKFTESGN-IDILVE 434 (920)
T ss_pred CCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCCC-EEEEEE
T ss_conf 5983674016789999999999999999973987999978999730653899999999999999997188993-799999
Q ss_pred EE--C-C--EEEEEEEECCCCCCHHHHHHHCCCCEECCCC--CCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEE
Q ss_conf 87--9-9--8999999788978977865414883762689--88885663799999999961986999978899439999
Q gi|255764476|r 714 RD--N-G--DFIFSVKNNGSSIPEDMCKSVFNRFVSNAHR--GQRRGVGLGLSIVESFINLHGGHVSISSSDEGVTTINC 786 (792)
Q Consensus 714 ~~--~-~--~v~i~V~D~G~GI~~e~~~riF~~F~~~~~~--~~~~GtGLGLsiv~~iVe~hgG~I~v~S~~G~Gttf~v 786 (792)
T Consensus 435 ~~~~~~~~~~l~~~V~DTGiGI~~~~~~~iF~~F~q~d~s~~r~~gGtGLGLaI~k~Lv~~mgG~I~v~S~~g~GS~F~F 514 (920)
T PRK11107 435 LRALSDEKVQLEVQIRDTGIGISERQQSQLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWF 514 (920)
T ss_pred EEECCCCEEEEEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCEEEEE
T ss_conf 99647984899999999705869999997854201567654456798774299999999980991799954899748999
Q ss_pred EEECC
Q ss_conf 97347
Q gi|255764476|r 787 RIPSK 791 (792)
Q Consensus 787 ~lP~~ 791 (792)
T Consensus 515 tlpl~ 519 (920)
T PRK11107 515 HLPLD 519 (920)
T ss_pred EEECC
T ss_conf 99804