HHsearch alignment for GI: 255764476 and conserved domain: TIGR02966

>TIGR02966 phoR_proteo phosphate regulon sensor kinase PhoR; InterPro: IPR014310 Members of this protein are the regulatory histidine kinase PhoR associated with the phosphate ABC transporter found in most Proteobacteria, and related proteins from Gram-positive organisms are excluded. The phoR gene usually is adjacent to the response regulator phoB gene (IPR011879 from INTERPRO)..
Probab=98.62  E-value=7.6e-07  Score=64.77  Aligned_cols=116  Identities=14%  Similarity=0.123  Sum_probs=75.3

Q ss_pred             HHHHHHHHHHHHHCCCCEEEECCCCCEEEECHHHHHHHCCCCCCHHHHHCCC-CCCCCHHHHHHHHHHCCC-CCE--EEE
Q ss_conf             9999999999851680058981599289852578987367787756610158-533896789999861257-870--345
Q gi|255764476|r  189 SNHISVFKVLFDSLDFLVWHRDQAGDILWANISYKKNTETEGIVFQKAIGES-RKLFKEEIKKRMISSSAL-EKN--FCE  264 (792)
Q Consensus       189 ~~~~~~lr~llda~P~~vw~~D~dGri~~vN~A~~~~~e~~~~~~~~~i~~~-~~ll~~~~~~~~~~~~~~-~~~--~~~  264 (792)
T Consensus         2 ~~~~~rf~~a~~AlPDavv~ld~~~~I~W~N~~A~~~LGl~~---p~D~Gq~i~~l~R~P~F~~yl~~~~~t~~p~~L~~   78 (339)
T TIGR02966         2 SALLSRFRAAAQALPDAVVVLDEEGQIEWCNKAAERLLGLRW---PDDLGQRITNLIRHPEFVEYLAAGRFTSEPEQLEL   78 (339)
T ss_pred             HHHHHHHHHHHHHCCCEEEEECCCCCEEEEEHHHHHHCCCCC---CHHHCCCHHHHCCCHHHHHHHHCCCCCCCCCCEEE
T ss_conf             468899999997589829997289837862148898627427---34507702121057679999733555578853110


Q ss_pred             EEEEEECCEEEEEEEEEEECCCCE-EEEEEEHHHHHHHHHHHHHHH
Q ss_conf             788865690789999976328952-999830458999887889999
Q gi|255764476|r  265 TVSTLEHGNNKSYKIVRVLNSFGE-AGIAIDVSKEITVNDQLTHTY  309 (792)
Q Consensus       265 ~~~~~~~G~rr~~~v~~~~~~~G~-~Gia~DITErk~ae~aLrr~~  309 (792)
T Consensus        79 ~--~~p~~~~~~l~~r~~PY~~~~~Ll~~RDvT~l~rLe~mRrDFV  122 (339)
T TIGR02966        79 P--DSPINEERVLEIRIMPYGEEQKLLVARDVTRLRRLEQMRRDFV  122 (339)
T ss_pred             C--CCCCCCCCEEEEEEEEECCCCEEEEEECHHHHHHHHHHHHHHC
T ss_conf             4--6888866479999997569837999876368999986534311