HHsearch alignment for GI: 255764477 and conserved domain: COG4185
>COG4185 Uncharacterized protein conserved in bacteria [Function unknown].
Probab=97.06 E-value=0.0028 Score=40.98 Aligned_cols=136 Identities=20% Similarity=0.249 Sum_probs=73.0
Q ss_pred EECCCCCCHHHHHHHH--HH-CCCEEEEHHHHHHHHHH--HHH-----HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 8888666789999999--97-79869990499999850--000-----11356653100012221110001111001246
Q gi|255764477|r 6 LTGSIGTGKTTVAEFL--KK-EKIPVISSDDIVDKLYH--YEA-----VDIIKKTFPRSIQNNKVNKARLLGILQKSPAK 75 (199)
Q Consensus 6 itG~igSGKStv~~~l--~~-~G~~v~~aD~i~~~l~~--~~~-----~~~i~~~fg~~i~~~~i~r~~l~~~vf~~~~~ 75 (199)
T Consensus 7 vaG~NGsGKstv~~~~~~~~~~~~~~VN~D~iA~~i~p~~p~~~~i~A~r~ai~~i~~~I~~---~~~F~~ETtLS~~s~ 83 (187)
T COG4185 7 VAGPNGSGKSTVYASTLAPLLPGIVFVNADEIAAQISPDNPTSAAIQAARVAIDRIARLIDL---GRPFIAETTLSGPSI 83 (187)
T ss_pred EECCCCCCCEEEEECCCHHHCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCEEEEECCCHH
T ss_conf 96688887325431023221487599877998553389996477899999999999999974---998415775136118
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHH-----CCCCHHHH
Q ss_conf 7888753489999999976677420247633345643255587564227899952111356888871-----79898999
Q gi|255764477|r 76 LEILEKIVHPMVRMHEKKILHDLSCRGEKIVFFDTPLLFEKRKEYLFDAVVVVTCSFETQRERVLSR-----KKHTEENF 150 (199)
Q Consensus 76 l~~L~~iiHP~V~~~~~~~i~~~~~~~~~~vv~e~pLL~E~~~~~~~d~vi~V~a~~~~r~~Rl~~R-----~~~s~e~~ 150 (199)
T Consensus 84 ~----------------~~ik~Ak~~Gf~I~---------------L--~y~~i~~~elavERVk~RVa~GGH~IpED~I 130 (187)
T COG4185 84 L----------------ELIKTAKAAGFYIV---------------L--NYIVIDSVELAVERVKLRVAKGGHDIPEDKI 130 (187)
T ss_pred H----------------HHHHHHHHCCEEEE---------------E--EEEEECCHHHHHHHHHHHHHCCCCCCCHHHH
T ss_conf 9----------------99999986776999---------------9--9999672888999999998617888818899
Q ss_pred HHHHHCCCC-HHHHHHHCCE-EEECCCCH
Q ss_conf 999972999-7899986898-99879998
Q gi|255764477|r 151 LFILSKQMN-EKDKISRADY-VINTEGTI 177 (199)
Q Consensus 151 ~~~~~~Q~~-~~~k~~~aD~-vI~N~~s~ 177 (199)
T Consensus 131 r~RY~rsle~l~~~l~l~dr~~IydNS~~ 159 (187)
T COG4185 131 RRRYRRSLELLAQALTLADRATIYDNSRL 159 (187)
T ss_pred HHHHHHHHHHHHHHHHHCCEEEEECCCCC
T ss_conf 99999999989999865442289628988