HHsearch alignment for GI: 255764477 and conserved domain: PRK09183

>PRK09183 transposase/IS protein; Provisional.
Probab=90.99  E-value=0.7  Score=25.96  Aligned_cols=38  Identities=34%  Similarity=0.398  Sum_probs=29.8

Q ss_pred             EEEEECCCCCCHHHHHHHHH----HCCCEE--EEHHHHHHHHHH
Q ss_conf             99988886667899999999----779869--990499999850
Q gi|255764477|r    3 IIGLTGSIGTGKTTVAEFLK----KEKIPV--ISSDDIVDKLYH   40 (199)
Q Consensus         3 iIgitG~igSGKStv~~~l~----~~G~~v--~~aD~i~~~l~~   40 (199)
T Consensus       103 Nvil~G~~GtGKThLA~Alg~~A~~~G~~v~f~~~~~L~~~L~~  146 (258)
T PRK09183        103 NIVLLGPSGVGKTHLAIALGYEAVRAGIKVRFTTAADLLLQLST  146 (258)
T ss_pred             CEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHH
T ss_conf             67998999986899999999999987993999789999999999