HHsearch alignment for GI: 255764477 and conserved domain: PRK13948
>PRK13948 shikimate kinase; Provisional.
Probab=99.12 E-value=1.3e-09 Score=80.61 Aligned_cols=157 Identities=15% Similarity=0.225 Sum_probs=89.4
Q ss_pred EEEEECCCCCCHHHHHHHHHH-CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 999888866678999999997-7986999049999985000011356653100012221110001111001246788875
Q gi|255764477|r 3 IIGLTGSIGTGKTTVAEFLKK-EKIPVISSDDIVDKLYHYEAVDIIKKTFPRSIQNNKVNKARLLGILQKSPAKLEILEK 81 (199)
Q Consensus 3 iIgitG~igSGKStv~~~l~~-~G~~v~~aD~i~~~l~~~~~~~~i~~~fg~~i~~~~i~r~~l~~~vf~~~~~l~~L~~ 81 (199)
T Consensus 12 ~IvLIG~mGsGKStiGk~LA~~l~~~fiD~D~~Ie~~~g~sI~eIF-~~~GE~--------------~F------R~~E~ 70 (182)
T PRK13948 12 FVALAGFMGTGKSRIGWELSRALALHFVDTDKLITRVVGKSIPEVF-AQEGEE--------------YF------RACEK 70 (182)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHCCCEEECHHHHHHHHCCCHHHHH-HHHCHH--------------HH------HHHHH
T ss_conf 1898899999889999999999695988884999998893999999-984899--------------99------99999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCC--CCCCCCCCCC--CCCEEEEEEECCCHHHHHHHHHHC-C-C----CHHHHH
Q ss_conf 3489999999976677420247633345--6432555875--642278999521113568888717-9-8----989999
Q gi|255764477|r 82 IVHPMVRMHEKKILHDLSCRGEKIVFFD--TPLLFEKRKE--YLFDAVVVVTCSFETQRERVLSRK-K-H----TEENFL 151 (199)
Q Consensus 82 iiHP~V~~~~~~~i~~~~~~~~~~vv~e--~pLL~E~~~~--~~~d~vi~V~a~~~~r~~Rl~~R~-~-~----s~e~~~ 151 (199)
T Consensus 71 -----------~~l~~l~~~-~~~VIStGGG~v~~~~n~~~l~~~g~vv~L~~~~~~i~~R~~~~~RPll~~~~~~~~l~ 138 (182)
T PRK13948 71 -----------EVVRRVTRL-DYAVISLGGGTFIHEENRRALLGRGPVVVLWASPETVYQRTKHSDRPLLQVEDPLERIR 138 (182)
T ss_pred -----------HHHHHHHCC-CCEEEECCCCEECCHHHHHHHHHCCEEEEEECCHHHHHHHCCCCCCCCCCCCCHHHHHH
T ss_conf -----------999999747-99699758850058999999996898999969999999881789999888998799999
Q ss_pred HHHHCCCCHHHHHHHCCEEEECCC-CHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 999729997899986898998799-98999999999999999987428
Q gi|255764477|r 152 FILSKQMNEKDKISRADYVINTEG-TIEAIEKETQKMLKYILKINDSK 198 (199)
Q Consensus 152 ~~~~~Q~~~~~k~~~aD~vI~N~~-s~~~l~~~i~~~~~~i~~l~~~k 198 (199)
T Consensus 139 ~l~~eR~~~Y--~~-A~~~I~td~~~~~ei---v~~Ii~~L~a~~~~~ 180 (182)
T PRK13948 139 TLMEEREPVY--RQ-GTIHVHSDGRPVEEI---VEEVVERLWAWAEAQ 180 (182)
T ss_pred HHHHHHHHHH--HH-CCEEEECCCCCHHHH---HHHHHHHHHHHHHCC
T ss_conf 9999999999--96-788988998999999---999999999998665