HHsearch alignment for GI: 255764477 and conserved domain: TIGR00017

>TIGR00017 cmk cytidylate kinase; InterPro: IPR003136 This family consists of cytidylate kinase (2.7.4.14 from EC), which catalyzes the phosphorylation of cytidine 5-monophosphate (dCMP) to cytidine 5 -diphosphate (dCDP) in the presence of ATP or GTP. UMP and dCMP can also act as acceptors .; GO: 0004127 cytidylate kinase activity, 0005524 ATP binding, 0006139 nucleobase nucleoside nucleotide and nucleic acid metabolic process.
Probab=98.32  E-value=1.3e-05  Score=55.62  Aligned_cols=142  Identities=15%  Similarity=0.091  Sum_probs=82.2

Q ss_pred             CEEEEEECCCCCCHHHHHHHHHH-CCCEEEEHHHHHHHH---HH---HH---H-----HHHHHHHHHHCCC--C----CC
Q ss_conf             95999888866678999999997-798699904999998---50---00---0-----1135665310001--2----22
Q gi|255764477|r    1 MLIIGLTGSIGTGKTTVAEFLKK-EKIPVISSDDIVDKL---YH---YE---A-----VDIIKKTFPRSIQ--N----NK   59 (199)
Q Consensus         1 M~iIgitG~igSGKStv~~~l~~-~G~~v~~aD~i~~~l---~~---~~---~-----~~~i~~~fg~~i~--~----~~   59 (199)
T Consensus         2 ~~~IAIDGPs~aGKStvak~~A~~L~y~yldsG~mYR~~a~~~qrsL~~~~d~~~E~~L~~L~~~~di~f~~~~~~~~v~   81 (223)
T TIGR00017         2 KMIIAIDGPSGAGKSTVAKAVAEKLGYKYLDSGAMYRALALAAQRSLQNRVDLTDEDALLELISQLDIRFIPTAGEVKVF   81 (223)
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEECCCCCEEEE
T ss_conf             86376237764655789999998629502144328999999999887406885684889999863260442157750688


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHH
Q ss_conf             11100011110012467888753489999999976677420247633345643255587564227899952111356888
Q gi|255764477|r   60 VNKARLLGILQKSPAKLEILEKIVHPMVRMHEKKILHDLSCRGEKIVFFDTPLLFEKRKEYLFDAVVVVTCSFETQRERV  139 (199)
Q Consensus        60 i~r~~l~~~vf~~~~~l~~L~~iiHP~V~~~~~~~i~~~~~~~~~~vv~e~pLL~E~~~~~~~d~vi~V~a~~~~r~~Rl  139 (199)
T Consensus        82 ~nG~DV~~~I~t~~v~~~aS~~A~~~~vR~~~~~~Qq~~~~~sd~g~v~dGRDi-GTvVfPnA~~KiFLdAsve~RA~RR  160 (223)
T TIGR00017        82 LNGEDVSEAIRTQEVANLASKVAAFPKVREILLKRQQKLAKNSDDGIVADGRDI-GTVVFPNAELKIFLDASVEERAKRR  160 (223)
T ss_pred             ECCCCHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEECCCC-CCEECCCCCCCEEECCCHHHHHHHH
T ss_conf             707771322068358999998723777999999999998751589758845523-7446788751324317878998876


Q ss_pred             HHHC
Q ss_conf             8717
Q gi|255764477|r  140 LSRK  143 (199)
Q Consensus       140 ~~R~  143 (199)
T Consensus       161 ~~~~  164 (223)
T TIGR00017       161 YKDL  164 (223)
T ss_pred             HHHH
T ss_conf             9998