HHsearch alignment for GI: 255764477 and conserved domain: TIGR00631
>TIGR00631 uvrb excinuclease ABC, B subunit; InterPro: IPR004807 All proteins in this family for which functions are known are DNA helicases that function in the nucleotide excision repair and are endonucleases that make the 3' incision next to DNA damage. They are part of a pathway requiring UvrA, UvrB, UvrC, and UvrD homologs.; GO: 0009381 excinuclease ABC activity, 0006289 nucleotide-excision repair, 0005737 cytoplasm, 0009380 excinuclease repair complex.
Probab=94.41 E-value=0.021 Score=35.52 Aligned_cols=25 Identities=36% Similarity=0.614 Sum_probs=20.4
Q ss_pred EEECCCCCCHH-HHHHHHHHCCCEEE
Q ss_conf 98888666789-99999997798699
Q gi|255764477|r 5 GLTGSIGTGKT-TVAEFLKKEKIPVI 29 (199)
Q Consensus 5 gitG~igSGKS-tv~~~l~~~G~~v~ 29 (199)
T Consensus 33 tLLGvTGsGKTFT~AnVIa~~~rPTL 58 (667)
T TIGR00631 33 TLLGVTGSGKTFTMANVIAQVQRPTL 58 (667)
T ss_pred EEEEEECCCHHHHHHHHHHHHCCCEE
T ss_conf 78532148627889899998479849