HHsearch alignment for GI: 255764477 and conserved domain: TIGR02173
>TIGR02173 cyt_kin_arch cytidylate kinase, putative; InterPro: IPR011892 Proteins in this family are believed to be cytidylate kinase. Members of this family are found in the archaea and in spirochaetes, and differ considerably from the common bacterial form of cytidylate kinase described by IPR003136 from INTERPRO.; GO: 0004127 cytidylate kinase activity, 0005524 ATP binding, 0006139 nucleobase nucleoside nucleotide and nucleic acid metabolic process.
Probab=99.44 E-value=4.2e-13 Score=102.56 Aligned_cols=141 Identities=24% Similarity=0.384 Sum_probs=90.2
Q ss_pred EEEEEECCCCCCHHHHHHHHHH-CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 5999888866678999999997-798699904999998500001135665310001222111000111100124678887
Q gi|255764477|r 2 LIIGLTGSIGTGKTTVAEFLKK-EKIPVISSDDIVDKLYHYEAVDIIKKTFPRSIQNNKVNKARLLGILQKSPAKLEILE 80 (199)
Q Consensus 2 ~iIgitG~igSGKStv~~~l~~-~G~~v~~aD~i~~~l~~~~~~~~i~~~fg~~i~~~~i~r~~l~~~vf~~~~~l~~L~ 80 (199)
T Consensus 1 M~I~ISGpPGSGktTvA~~lA~~Lsl~~iSaG~i-RelA~~~Gldl~E~~~ae--e~~eIDk~----------------- 60 (173)
T TIGR02173 1 MIITISGPPGSGKTTVAKILAEKLSLKLISAGDI-RELAEKMGLDLAESKYAE--ENPEIDKK----------------- 60 (173)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHCCCCEECCCHH-HHHHHHCCCCHHHHHHHC--CCCCCCHH-----------------
T ss_conf 9788735896864789999998639831202007-889864298877734430--58631167-----------------
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC-----CCEEEEEEECCCHHHHHHHHHHCCCCHHHHH-HHH
Q ss_conf 5348999999997667742024763334564325558756-----4227899952111356888871798989999-999
Q gi|255764477|r 81 KIVHPMVRMHEKKILHDLSCRGEKIVFFDTPLLFEKRKEY-----LFDAVVVVTCSFETQRERVLSRKKHTEENFL-FIL 154 (199)
Q Consensus 81 ~iiHP~V~~~~~~~i~~~~~~~~~~vv~e~pLL~E~~~~~-----~~d~vi~V~a~~~~r~~Rl~~R~~~s~e~~~-~~~ 154 (199)
T Consensus 61 ----------iD~~~~E~A~-~~~nvvlEsrl---agW~~~~nG~yaD~~iyL~A~levRA~RIA~Re~k~~~~A~~~~~ 126 (173)
T TIGR02173 61 ----------IDRRIREIAE-KEKNVVLESRL---AGWILKKNGEYADVKIYLKAPLEVRARRIAKRENKDLTVALKEII 126 (173)
T ss_pred ----------HHHHHHHHHC-CCCCEEEEEHH---HHHHCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHH
T ss_conf ----------5378855430-48966885205---433115788967567886088333243321136889899999999
Q ss_pred HCCCCHHHHHHHCCEEEE-CCCCH
Q ss_conf 729997899986898998-79998
Q gi|255764477|r 155 SKQMNEKDKISRADYVIN-TEGTI 177 (199)
Q Consensus 155 ~~Q~~~~~k~~~aD~vI~-N~~s~ 177 (199)
T Consensus 127 ~REe~e~-rRy~~iYgIDidDlsi 149 (173)
T TIGR02173 127 EREESEK-RRYKEIYGIDIDDLSI 149 (173)
T ss_pred HHHHHHH-HHHHHHCCCCCCCCEE
T ss_conf 9887622-3456652502343222