HHsearch alignment for GI: 255764477 and conserved domain: cd02030

>cd02030 NDUO42 NADH:Ubiquinone oxioreductase, 42 kDa (NDUO42) is a family of proteins that are highly similar to deoxyribonucleoside kinases (dNK). Members of this family have been identified as one of the subunits of NADH:Ubiquinone oxioreductase (complex I), a multi-protein complex located in the inner mitochondrial membrane. The main function of the complex is to transport electrons from NADH to ubiquinone, which is accompanied by the translocation of protons from the mitochondrial matrix to the inter membrane space.
Probab=98.57  E-value=4.8e-06  Score=58.35  Aligned_cols=64  Identities=13%  Similarity=0.109  Sum_probs=39.0

Q ss_pred             CEEEEEEECCCHHHHHHHHHHC-----CCCHHHHHHHHHCC--CCHHHHHHHCCEEEE---CCCCHHHHHHHHH
Q ss_conf             2278999521113568888717-----98989999999729--997899986898998---7999899999999
Q gi|255764477|r  122 FDAVVVVTCSFETQRERVLSRK-----KHTEENFLFILSKQ--MNEKDKISRADYVIN---TEGTIEAIEKETQ  185 (199)
Q Consensus       122 ~d~vi~V~a~~~~r~~Rl~~R~-----~~s~e~~~~~~~~Q--~~~~~k~~~aD~vI~---N~~s~~~l~~~i~  185 (199)
T Consensus       143 PdlvIYL~a~pe~~~~RI~kRgR~~E~~I~~~YL~~L~~~ye~~fl~~~~~~~~vlv~D~~~~~~~~~v~~~~e  216 (219)
T cd02030         143 PHLVIYLDVPVPEVQKRIKKRGDPHEMKVTSAYLQDIENAYKKTFLPEISEHSEVLQYDWTEAGDTEKVVEDIE  216 (219)
T ss_pred             CCEEEEEECCHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHH
T ss_conf             99899983999999999998394754089999999999999999999886589679987665665999999998