HHsearch alignment for GI: 255764477 and conserved domain: cd02034
>cd02034 CooC The accessory protein CooC, which contains a nucleotide-binding domain (P-loop) near the N-terminus, participates in the maturation of the nickel center of carbon monoxide dehydrogenase (CODH). CODH from Rhodospirillum rubrum catalyzes the reversible oxidation of CO to CO2. CODH contains a nickel-iron-sulfur cluster (C-center) and an iron-sulfur cluster (B-center). CO oxidation occurs at the C-center. Three accessory proteins encoded by cooCTJ genes are involved in nickel incorporation into a nickel site. CooC functions as a nickel insertase that mobilizes nickel to apoCODH using energy released from ATP hydrolysis. CooC is a homodimer and has NTPase activities. Mutation at the P-loop abolishs its function.
Probab=93.36 E-value=0.1 Score=31.17 Aligned_cols=31 Identities=45% Similarity=0.669 Sum_probs=23.7
Q ss_pred EEEEECCCCCCHHHHHHHH----HHCCCEE--EEHHH
Q ss_conf 9998888666789999999----9779869--99049
Q gi|255764477|r 3 IIGLTGSIGTGKTTVAEFL----KKEKIPV--ISSDD 33 (199)
Q Consensus 3 iIgitG~igSGKStv~~~l----~~~G~~v--~~aD~ 33 (199)
T Consensus 1 kia~~GKGGvGKtt~~~~la~~l~~~g~~vl~iD~Dp 37 (116)
T cd02034 1 KIAITGKGGVGKTTIAALLARYLAEKGKPVLAIDADP 37 (116)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCC
T ss_conf 9789889977499999999999997899699998989