>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.

Probab=92.43  E-value=0.13  Score=30.63  Aligned_cols=21  Identities=38%  Similarity=0.569  Sum_probs=19.3

Q ss_pred             EEEEECCCCCCHHHHHHHHHH
Q ss_conf             999888866678999999997
Q gi|255764477|r    3 IIGLTGSIGTGKTTVAEFLKK   23 (199)
Q Consensus         3 iIgitG~igSGKStv~~~l~~   23 (199)
T Consensus        28 i~~liG~nGaGKSTLl~~i~G   48 (222)
T cd03224          28 IVALLGRNGAGKTTLLKTIMG   48 (222)
T ss_pred             EEEEECCCCCCHHHHHHHHHC
T ss_conf             999999999859999999977