HHsearch alignment for GI: 255764477 and conserved domain: cd03233
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=93.09 E-value=0.093 Score=31.45 Aligned_cols=22 Identities=23% Similarity=0.391 Sum_probs=19.8
Q ss_pred EEEEECCCCCCHHHHHHHHHHC
Q ss_conf 9998888666789999999977
Q gi|255764477|r 3 IIGLTGSIGTGKTTVAEFLKKE 24 (199)
Q Consensus 3 iIgitG~igSGKStv~~~l~~~ 24 (199)
T Consensus 35 i~~llG~nGsGKSTLl~~l~G~ 56 (202)
T cd03233 35 MVLVLGRPGSGCSTLLKALANR 56 (202)
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 9999989999889999998378