HHsearch alignment for GI: 255764477 and conserved domain: cd03295
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=93.77 E-value=0.058 Score=32.73 Aligned_cols=21 Identities=33% Similarity=0.642 Sum_probs=19.2
Q ss_pred EEEEECCCCCCHHHHHHHHHH
Q ss_conf 999888866678999999997
Q gi|255764477|r 3 IIGLTGSIGTGKTTVAEFLKK 23 (199)
Q Consensus 3 iIgitG~igSGKStv~~~l~~ 23 (199)
T Consensus 29 ~~~ilGpSG~GKSTllr~i~g 49 (242)
T cd03295 29 FLVLIGPSGSGKTTTMKMINR 49 (242)
T ss_pred EEEEECCCCCHHHHHHHHHHC
T ss_conf 999999999569999999975