Query gi|255764480|ref|YP_003084343.1| hypothetical protein CLIBASIA_03352 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 57
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 13730
Date Wed Jun 1 06:48:24 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 255764480.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ds1a_ b.82.2.2 (A:) Clavamin 39.7 3.8 0.00028 20.0 0.6 30 2-31 140-175 (323)
2 d1nx4a_ b.82.2.8 (A:) Carbapen 19.1 14 0.00099 17.4 0.4 21 2-22 97-117 (271)
3 d1k3va_ b.121.5.2 (A:) Parvovi 12.1 23 0.0017 16.3 0.1 11 3-13 10-20 (542)
4 d2csga1 b.82.2.12 (A:3-419) Hy 10.4 36 0.0026 15.5 0.6 14 1-14 334-347 (417)
5 d1s58a_ b.121.5.2 (A:) Parvovi 9.8 30 0.0022 15.8 0.0 12 3-14 6-17 (536)
6 d1c8da_ b.121.5.2 (A:) Parvovi 8.0 40 0.0029 15.2 0.1 10 4-13 9-20 (548)
7 d2ihoa2 d.3.1.18 (A:156-293) A 6.2 70 0.0051 14.1 0.6 28 16-43 18-45 (138)
8 d2g39a1 c.124.1.2 (A:3-223) Ac 5.6 41 0.003 15.2 -0.9 22 14-35 132-153 (221)
9 d1lp3a_ b.121.5.2 (A:) Dependo 4.7 80 0.0059 13.8 0.1 10 4-13 12-21 (519)
10 d1jr7a_ b.82.2.3 (A:) Gab prot 4.3 1.1E+02 0.008 13.2 0.6 20 2-21 143-162 (311)
No 1
>d1ds1a_ b.82.2.2 (A:) Clavaminate synthase {Streptomyces clavuligerus [TaxId: 1901]}
Probab=39.75 E-value=3.8 Score=20.03 Aligned_cols=30 Identities=10% Similarity=0.224 Sum_probs=23.8
Q ss_pred EEEEECCCCCCCCCCHHHHHHH------CCCEEEEE
Q ss_conf 1475032111448242335320------66403541
Q gi|255764480|r 2 MFWHCDSRFAEDKPDIQGFLSY------GSSTIYHT 31 (57)
Q Consensus 2 mfwhcdsrfaedkpdiqgflsy------gsstiyht 31 (57)
+.||+|+-|.+..||+++|+.. |.+|++-.
T Consensus 140 L~~HtD~ay~~~~Pd~v~L~Clr~~~~GG~st~v~~ 175 (323)
T d1ds1a_ 140 LEFHTEMAYHRLQPNYVMLACSRADHERTAATLVAS 175 (323)
T ss_dssp EEEECTTTTBTTCCSEEEEEEEECCTTCCCCEEEEE
T ss_pred CCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEECHH
T ss_conf 315216898789972228997626798986433033
No 2
>d1nx4a_ b.82.2.8 (A:) Carbapenem synthase, CarC {Erwinia carotovora [TaxId: 554]}
Probab=19.12 E-value=14 Score=17.43 Aligned_cols=21 Identities=14% Similarity=0.170 Sum_probs=18.9
Q ss_pred EEEEECCCCCCCCCCHHHHHH
Q ss_conf 147503211144824233532
Q gi|255764480|r 2 MFWHCDSRFAEDKPDIQGFLS 22 (57)
Q Consensus 2 mfwhcdsrfaedkpdiqgfls 22 (57)
+.||+|.-|.+..|+.+.|..
T Consensus 97 l~~HtD~~~~~~pp~~~~L~c 117 (271)
T d1nx4a_ 97 LPFHADGGLLLSQVDQVFLYA 117 (271)
T ss_dssp EEEECSSSSSSCCCCEEEEEE
T ss_pred CCCCCCCCCCCCCCCEEEEEE
T ss_conf 774637899789986598997
No 3
>d1k3va_ b.121.5.2 (A:) Parvovirus (panleukopenia virus) capsid protein {Porcine parvovirus [TaxId: 10796]}
Probab=12.06 E-value=23 Score=16.34 Aligned_cols=11 Identities=0% Similarity=0.039 Sum_probs=8.0
Q ss_pred EEEECCCCCCC
Q ss_conf 47503211144
Q gi|255764480|r 3 FWHCDSRFAED 13 (57)
Q Consensus 3 fwhcdsrfaed 13 (57)
=||||++|-+|
T Consensus 10 ~~~~~~~~~~~ 20 (542)
T d1k3va_ 10 NNQTEFQYLGE 20 (542)
T ss_dssp CCCEEEEEEGG
T ss_pred CCCCCEEECCC
T ss_conf 66432387368
No 4
>d2csga1 b.82.2.12 (A:3-419) Hypothetical protein YbiU {Salmonella typhimurium [TaxId: 90371]}
Probab=10.36 E-value=36 Score=15.46 Aligned_cols=14 Identities=29% Similarity=0.833 Sum_probs=9.2
Q ss_pred CEEEEECCCCCCCC
Q ss_conf 91475032111448
Q gi|255764480|r 1 MMFWHCDSRFAEDK 14 (57)
Q Consensus 1 mmfwhcdsrfaedk 14 (57)
|+|||||.-.+-++
T Consensus 334 ~V~Wh~d~iH~v~~ 347 (417)
T d2csga1 334 SVWWHCDVIHSVAP 347 (417)
T ss_dssp EEEEETTCCEEECC
T ss_pred EEEEECCCCCCCCC
T ss_conf 78870787534466
No 5
>d1s58a_ b.121.5.2 (A:) Parvovirus (panleukopenia virus) capsid protein {Human parvovirus B19 [TaxId: 10798]}
Probab=9.79 E-value=30 Score=15.85 Aligned_cols=12 Identities=17% Similarity=0.667 Sum_probs=8.4
Q ss_pred EEEECCCCCCCC
Q ss_conf 475032111448
Q gi|255764480|r 3 FWHCDSRFAEDK 14 (57)
Q Consensus 3 fwhcdsrfaedk 14 (57)
.|||||.|.+|.
T Consensus 6 ~W~~gs~~~~~~ 17 (536)
T d1s58a_ 6 MWSEGATFSANS 17 (536)
T ss_dssp CCCCEEEEETTE
T ss_pred EEECCCEECCCE
T ss_conf 773688877997
No 6
>d1c8da_ b.121.5.2 (A:) Parvovirus (panleukopenia virus) capsid protein {Canine parvovirus [TaxId: 10788]}
Probab=8.01 E-value=40 Score=15.21 Aligned_cols=10 Identities=20% Similarity=0.657 Sum_probs=5.0
Q ss_pred EEECC--CCCCC
Q ss_conf 75032--11144
Q gi|255764480|r 4 WHCDS--RFAED 13 (57)
Q Consensus 4 whcds--rfaed 13 (57)
||||| +|-.|
T Consensus 9 ~~~~t~~k~lgd 20 (548)
T d1c8da_ 9 FNNQTEFKFLEN 20 (548)
T ss_dssp CCCCEEEEEETT
T ss_pred CCCCCEEEECCC
T ss_conf 456640467268
No 7
>d2ihoa2 d.3.1.18 (A:156-293) Agglutinin MOA {Fairy-ring mushroom (Marasmius oreades) [TaxId: 181124]}
Probab=6.15 E-value=70 Score=14.08 Aligned_cols=28 Identities=14% Similarity=0.219 Sum_probs=22.5
Q ss_pred CHHHHHHHCCCEEEEEHHHHHHHHHHCC
Q ss_conf 4233532066403541121134443100
Q gi|255764480|r 16 DIQGFLSYGSSTIYHTTALREWSTIWSS 43 (57)
Q Consensus 16 diqgflsygsstiyhttalrewstiwss 43 (57)
--|.|-+|-+...|-.-..-.|+.||..
T Consensus 18 ~~qdf~~Y~~DgeYLVLp~~~~s~IWk~ 45 (138)
T d2ihoa2 18 IHGTYRGYILDGEYLVLPNATFTQIWKD 45 (138)
T ss_dssp CCSEEECSSTTCEEECCCHHHHHHHHHT
T ss_pred CCCCCEEEECCCEEEEECHHHHHHHHHC
T ss_conf 4566001322533899530789998860
No 8
>d2g39a1 c.124.1.2 (A:3-223) Acetyl-CoA hydrolase (PA5445) {Pseudomonas aeruginosa [TaxId: 287]}
Probab=5.57 E-value=41 Score=15.20 Aligned_cols=22 Identities=14% Similarity=-0.075 Sum_probs=16.0
Q ss_pred CCCHHHHHHHCCCEEEEEHHHH
Q ss_conf 8242335320664035411211
Q gi|255764480|r 14 KPDIQGFLSYGSSTIYHTTALR 35 (57)
Q Consensus 14 kpdiqgflsygsstiyhttalr 35 (57)
.+|-.|++++|.|.-|..++++
T Consensus 132 ~~De~G~~~~g~s~~~~~~~~~ 153 (221)
T d2g39a1 132 AITEQGHIVPTTSVGNSASFAI 153 (221)
T ss_dssp EECTTSCEECCSBCBTHHHHHH
T ss_pred CCCCCEEEEEECCCCHHHHHHH
T ss_conf 3789814976065162999998
No 9
>d1lp3a_ b.121.5.2 (A:) Dependovirus capsid protein {Adeno-associated virus, aav-2 [TaxId: 272636]}
Probab=4.72 E-value=80 Score=13.80 Aligned_cols=10 Identities=60% Similarity=1.504 Sum_probs=6.8
Q ss_pred EEECCCCCCC
Q ss_conf 7503211144
Q gi|255764480|r 4 WHCDSRFAED 13 (57)
Q Consensus 4 whcdsrfaed 13 (57)
||||+.|-+|
T Consensus 12 W~~gs~f~~~ 21 (519)
T d1lp3a_ 12 WHCDSTWMGD 21 (519)
T ss_dssp CCCCEEECSS
T ss_pred CCCCCEECCC
T ss_conf 3667887799
No 10
>d1jr7a_ b.82.2.3 (A:) Gab protein (hypothetical protein YgaT) {Escherichia coli [TaxId: 562]}
Probab=4.31 E-value=1.1e+02 Score=13.17 Aligned_cols=20 Identities=25% Similarity=0.348 Sum_probs=0.0
Q ss_pred EEEEECCCCCCCCCCHHHHH
Q ss_conf 14750321114482423353
Q gi|255764480|r 2 MFWHCDSRFAEDKPDIQGFL 21 (57)
Q Consensus 2 mfwhcdsrfaedkpdiqgfl 21 (57)
|=||.|.-+-.+.|++|.+.
T Consensus 143 L~lHTDgtY~~e~Pg~qlLh 162 (311)
T d1jr7a_ 143 MELHNDGTYVEEITDYVLMM 162 (311)
T ss_dssp EEEECSCTTSSSCCCEEEEE
T ss_pred CCCCCCCCCCCCHHHHHHHH
T ss_conf 65325788777635543313
Done!