RPS-BLAST 2.2.22 [Sep-27-2009]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= gi|255764480|ref|YP_003084343.1| hypothetical protein
CLIBASIA_03352 [Candidatus Liberibacter asiaticus str. psy62]
         (57 letters)



>d1ds1a_ b.82.2.2 (A:) Clavaminate synthase {Streptomyces
           clavuligerus [TaxId: 1901]}
          Length = 323

 Score = 24.3 bits (52), Expect = 2.6
 Identities = 2/21 (9%), Positives = 8/21 (38%)

Query: 2   MFWHCDSRFAEDKPDIQGFLS 22
           + +H +  +   +P+      
Sbjct: 140 LEFHTEMAYHRLQPNYVMLAC 160


>d2g39a1 c.124.1.2 (A:3-223) Acetyl-CoA hydrolase (PA5445)
           {Pseudomonas aeruginosa [TaxId: 287]}
          Length = 221

 Score = 23.7 bits (51), Expect = 4.4
 Identities = 3/22 (13%), Positives = 6/22 (27%)

Query: 14  KPDIQGFLSYGSSTIYHTTALR 35
               QG +   +S     +   
Sbjct: 132 AITEQGHIVPTTSVGNSASFAI 153


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.324    0.134    0.455 

Gapped
Lambda     K      H
   0.267   0.0620    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 236,826
Number of extensions: 7142
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 18
Number of HSP's successfully gapped: 4
Length of query: 57
Length of database: 2,407,596
Length adjustment: 27
Effective length of query: 30
Effective length of database: 2,036,886
Effective search space: 61106580
Effective search space used: 61106580
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 47 (22.1 bits)