HHsearch alignment for GI: 255764481 and conserved domain: COG1044

Probab=100.00  E-value=8.4e-39  Score=263.15  Aligned_cols=219  Identities=24%  Similarity=0.392  Sum_probs=184.6

Q ss_pred             CCCCCCCEECCCEEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEEEEEEECCCCCEEEECCCCCC---
Q ss_conf             50579975655108889859988989956559889989988989866868916846865531143422321023331---
Q gi|255764481|r    2 SRMGNNPIIHPLALVEEGAVIGPNSLIGPFCCVGSEVEIGAGVELISHCVVAGKTKIGDFTKVFPMAVLGGDTQSKY---   78 (271)
Q Consensus         2 ~~i~~~~~IhpsA~I~~~a~Ig~~v~Igp~~~I~~~v~IG~~~~I~~~v~I~g~t~IG~~~~I~~~a~Ig~~~qd~~---   78 (271)
T Consensus       112 A~i~~~~~ig~~vvI~~~v~IG~~~~I~~~avIg~~~~IG~~~~i~~~v~I~~~~~IG~~v~I~~GavIG~dgFg~a~~~  191 (338)
T COG1044         112 ATIGKNVSIGPNVVIGAGVVIGENVVIGAGAVIGENVKIGDGTVIHPNVTIYHNVVIGNNVIIHSGAVIGADGFGYAGTA  191 (338)
T ss_pred             CCCCCCCCCCCCEEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEEECCCEECCCEEECCCCEECCCCCCCCCCC
T ss_conf             70377873288749888978789858988978888968888858847878952757878228889988756852122466


Q ss_pred             ----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEE
Q ss_conf             ----2222223322222221224432111122222212233200001665543310012344322345245532148606
Q gi|255764481|r   79 ----HNFVGTELLVGKKCVIREGVTINRGTVEYGGKTIVGDNNFFLANSHVAHDCKLGNGIVLSNNVMIAGHVIVDDRVV  154 (271)
Q Consensus        79 ----~~g~~~~v~IG~~~~Ire~v~I~~gt~~~~~~T~IG~~~~i~~~~hI~Hd~~IG~~vii~n~~~l~G~v~Igd~~~  154 (271)
T Consensus       192 ~g~~Ki~q~g~V~Igd~VeIGanT~Idrga~~---dTvIg~~~kIdN~vqIaHnv~IG~~~~I~~~vgIaGs~~IG~~v~  268 (338)
T COG1044         192 IGWVKIPQIGRVIIGDDVEIGANTTIDRGALD---DTVIGEGVKIDNLVQIGHNVRIGEHCIIAGQVGIAGSVKIGKYVI  268 (338)
T ss_pred             CCCEECCEECEEEECCCEEECCCCEECCCCCC---CCEECCCCEECCEEEECCCCEECCCCEEECCCEEECCCEECCEEE
T ss_conf             88567126065997982487355242565556---726537848764307815527888837702631613535778079


Q ss_pred             ECCCCCCCCCEEEECCCEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHH
Q ss_conf             52344433650640474350132112233331000107453233442014442888999999999999997279989999
Q gi|255764481|r  155 FGGGSAVHQFTRIGKYAFIGGMTGVVHDVIPYGILNGNPGALRGVNVVAMRRAGFSRDTIHLIRAVYKQIFQQGDSIYKN  234 (271)
Q Consensus       155 IG~~~~v~~~v~IG~~a~ig~gs~V~kdVpp~~~~~G~pa~~~~~N~~glkR~g~s~e~i~~l~~ayr~lfr~~~~l~e~  234 (271)
T Consensus       269 igg~vgI~gh~~IgD~~~I~~~~~v~~~i~~~~~~gg~P~~p~---k~w~k-------------~~--a~~~~l~~~~~r  330 (338)
T COG1044         269 IGGQVGIAGHLEIGDGVTIGARSGVMASITEPGYSGGIPAQPI---KEWLK-------------TA--ALIRRLPEMRKR  330 (338)
T ss_pred             ECCCEEECCCEEECCCCEEECCCCCCCCCCCCCEECCCCCCHH---HHHHH-------------HH--HHHHHCHHHHHH
T ss_conf             8761346484187578788045243123578866336777539---99999-------------99--998527778999


Q ss_pred             HHHHHHH
Q ss_conf             9999964
Q gi|255764481|r  235 AGAIREQ  241 (271)
Q Consensus       235 l~~l~~~  241 (271)
T Consensus       331 ~k~lek~  337 (338)
T COG1044         331 LKALEKQ  337 (338)
T ss_pred             HHHHHCC
T ss_conf             8776405