HHsearch alignment for GI: 255764481 and conserved domain: PRK13627

>PRK13627 carnitine operon protein CaiE; Provisional.
Probab=99.70  E-value=3.7e-17  Score=127.77  Aligned_cols=166  Identities=15%  Similarity=0.279  Sum_probs=124.6

Q ss_pred             CCCCCCCEECCCEEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEEEEEEECCCCCEEEECCCCCCCCC
Q ss_conf             50579975655108889859988989956559889989988989866868916846865531143422321023331222
Q gi|255764481|r    2 SRMGNNPIIHPLALVEEGAVIGPNSLIGPFCCVGSEVEIGAGVELISHCVVAGKTKIGDFTKVFPMAVLGGDTQSKYHNF   81 (271)
Q Consensus         2 ~~i~~~~~IhpsA~I~~~a~Ig~~v~Igp~~~I~~~v~IG~~~~I~~~v~I~g~t~IG~~~~I~~~a~Ig~~~qd~~~~g   81 (271)
T Consensus        11 P~i~~~afIap~A~viGdV~ig~~~sIw~~aVlRGD~---------------~~I~IG~~tNIQD~~viH~~~-------   68 (196)
T PRK13627         11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDY---------------GRLIVQAGANLQDGCIMHGYC-------   68 (196)
T ss_pred             CCCCCCEEECCCCEEEEEEEECCCCEECCCEEEECCC---------------CCEEECCCCEECCCCEEECCC-------
T ss_conf             7229983889999899849999998897770895688---------------717989986767983781489-------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEECCCCCC
Q ss_conf             22233222222212244321111222222122332000016655433100123443223452455321486065234443
Q gi|255764481|r   82 VGTELLVGKKCVIREGVTINRGTVEYGGKTIVGDNNFFLANSHVAHDCKLGNGIVLSNNVMIAGHVIVDDRVVFGGGSAV  161 (271)
Q Consensus        82 ~~~~v~IG~~~~Ire~v~I~~gt~~~~~~T~IG~~~~i~~~~hI~Hd~~IG~~vii~n~~~l~G~v~Igd~~~IG~~~~v  161 (271)
T Consensus        69 -~~~~~IG~~vtIGH~ail--------------------------hgc~Igd~~lIGmgavVldga~Ig~~~iI~AgslV  121 (196)
T PRK13627         69 -DTDTIVGENGHIGHGAIL--------------------------HGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFV  121 (196)
T ss_pred             -CCCCEECCCEEECCCEEE--------------------------EEEEEECCCEECCCCEEECCCEECCCCEECCCCEE
T ss_conf             -998588898058787299--------------------------63499489788469799288899999899768645


Q ss_pred             CCCEEEECCCEEECC-CCCCCCCCCCCHHHHCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCHH
Q ss_conf             365064047435013-21122333310001074532334420144428889999999999999972799899
Q gi|255764481|r  162 HQFTRIGKYAFIGGM-TGVVHDVIPYGILNGNPGALRGVNVVAMRRAGFSRDTIHLIRAVYKQIFQQGDSIY  232 (271)
Q Consensus       162 ~~~v~IG~~a~ig~g-s~V~kdVpp~~~~~G~pa~~~~~N~~glkR~g~s~e~i~~l~~ayr~lfr~~~~l~  232 (271)
T Consensus       122 ~~g~~ip~~~L~~G~PAk~vR~lt~~ei----------------~~~~~~a~~Y~~la~r~~~~l~~~~Pl~  177 (196)
T PRK13627        122 KAGFQGEKRQLLMGTPARAVRSVSDQEL----------------HWKRLNTKEYQDLAGRCHASLHETQPLT  177 (196)
T ss_pred             CCCCCCCCCCEEEECCEEEEECCCHHHH----------------HHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf             7994938981998778168114999999----------------9988769999999999985485468864