HHsearch alignment for GI: 255764481 and conserved domain: TIGR01852

>TIGR01852 lipid_A_lpxA acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; InterPro: IPR010137 This entry describes LpxA, an enzyme for the biosynthesis of lipid A, a component of lipopolysaccharide (LPS) in the outer membrane outer leaflet of most Gram-negative bacteria. Some differences are found between lipid A of different species, but this protein represents the first step (from UDP-N-acetyl-D-glucosamine) and appears to be conserved in function. Proteins from this family contain many copies of the bacterial transferase hexapeptide repeat.; GO: 0008780 acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity, 0008610 lipid biosynthetic process.
Probab=100.00  E-value=0  Score=708.06  Aligned_cols=255  Identities=50%  Similarity=0.839  Sum_probs=252.8

Q ss_pred             ECCCEEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCC
Q ss_conf             65510888985998898995655988998998898986686891684686553114342232102333122222233222
Q gi|255764481|r   10 IHPLALVEEGAVIGPNSLIGPFCCVGSEVEIGAGVELISHCVVAGKTKIGDFTKVFPMAVLGGDTQSKYHNFVGTELLVG   89 (271)
Q Consensus        10 IhpsA~I~~~a~Ig~~v~Igp~~~I~~~v~IG~~~~I~~~v~I~g~t~IG~~~~I~~~a~Ig~~~qd~~~~g~~~~v~IG   89 (271)
T Consensus         1 IHPTA~ie~gA~iG~~V~iGPf~~v~~~V~ig~g~~l~shV~i~G~T~iG~~~~i~p~A~iG~~PQdlky~GE~t~l~IG   80 (257)
T TIGR01852         1 IHPTAIIEPGAEIGEDVEIGPFCIVGPGVKIGDGVELKSHVVIEGHTTIGEGTKIFPGAVIGGEPQDLKYKGERTELIIG   80 (257)
T ss_pred             CCCCEEECCCCEECCCCEEEEEEEECCCCEECCCCEECCCEEEECCEEECCCCEEECCEEECCCCCCCEECCCCCEEEEC
T ss_conf             99621878866828985780188878975886885875736896770878998880760767988565014870179988


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEECCCCCCCCCEEEEC
Q ss_conf             22221224432111122222212233200001665543310012344322345245532148606523444336506404
Q gi|255764481|r   90 KKCVIREGVTINRGTVEYGGKTIVGDNNFFLANSHVAHDCKLGNGIVLSNNVMIAGHVIVDDRVVFGGGSAVHQFTRIGK  169 (271)
Q Consensus        90 ~~~~Ire~v~I~~gt~~~~~~T~IG~~~~i~~~~hI~Hd~~IG~~vii~n~~~l~G~v~Igd~~~IG~~~~v~~~v~IG~  169 (271)
T Consensus        81 ~~n~IRE~VTi~~GT~~g~g~T~iG~~nllMAysHvAHDC~vGn~vv~aN~a~LAGHV~vgD~a~iGG~~avHQFvRIG~  160 (257)
T TIGR01852        81 DNNTIREFVTINRGTKSGGGVTSIGNNNLLMAYSHVAHDCVVGNHVVLANNATLAGHVEVGDYAIIGGLVAVHQFVRIGR  160 (257)
T ss_pred             CCCEEEEEEEECCCCCCCCCEEEECCCCEECCCCEEEECCEECCEEEEECCCEECEEEEECCEEEECCCCCEEEEEEEHH
T ss_conf             96569755785066258888899888765720535612436888169813631222799888999778972110133000


Q ss_pred             CCEEECCCCCCCCCCCCCHHHHC-CCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH-CCCCHH
Q ss_conf             74350132112233331000107-4532334420144428889999999999999972799899999999964-258989
Q gi|255764481|r  170 YAFIGGMTGVVHDVIPYGILNGN-PGALRGVNVVAMRRAGFSRDTIHLIRAVYKQIFQQGDSIYKNAGAIREQ-NVSCPE  247 (271)
Q Consensus       170 ~a~ig~gs~V~kdVpp~~~~~G~-pa~~~~~N~~glkR~g~s~e~i~~l~~ayr~lfr~~~~l~e~l~~l~~~-~~~~~~  247 (271)
T Consensus       161 ~aMigG~s~v~~DvpPY~~~~G~~~a~l~GlN~vGLrR~Gf~~~~i~~i~~ayr~lfr~~~~~~~~~~~v~e~P~~~~~~  240 (257)
T TIGR01852       161 YAMIGGLSAVSKDVPPYGLVEGNSRAVLRGLNIVGLRRRGFDREEITAIKKAYRLLFRSGLPLQEALQQVAEEPYEDNPE  240 (257)
T ss_pred             HHHHHHHCCCCCCCCCCEEECCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHH
T ss_conf             23221200246787761786378753378870132213787989999999998876179989899999998351337757


Q ss_pred             HHHHHHHHHHCCCCCCC
Q ss_conf             99999998615888737
Q gi|255764481|r  248 VSDIINFIFADRKRPLS  264 (271)
Q Consensus       248 v~~~~~Fi~~s~rRgi~  264 (271)
T Consensus       241 v~~~~~FI~~dS~RG~~  257 (257)
T TIGR01852       241 VKEIVDFIREDSKRGLC  257 (257)
T ss_pred             HHHHHHHHCCCCCCCCC
T ss_conf             99999986076668889