HHsearch alignment for GI: 255764481 and conserved domain: cd03353
>cd03353 LbH_GlmU_C N-acetyl-glucosamine-1-phosphate uridyltransferase (GlmU), C-terminal left-handed beta-helix (LbH) acetyltransferase domain: GlmU is also known as UDP-N-acetylglucosamine pyrophosphorylase. It is a bifunctional bacterial enzyme that catalyzes two consecutive steps in the formation of UDP-N-acetylglucosamine (UDP-GlcNAc), an important precursor in bacterial cell wall formation. The two enzymatic activities, uridyltransferase and acetyltransferase, are carried out by two independent domains. The C-terminal LbH domain possesses the acetyltransferase activity. It catalyzes the CoA-dependent acetylation of GlcN-1-phosphate to GlcNAc-1-phosphate. The LbH domain contains 10 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X. The acetyltransferase active site is located at the interface between two subunits of the active LbH trimer.
Probab=100.00 E-value=2.6e-39 Score=266.32 Aligned_cols=180 Identities=21% Similarity=0.347 Sum_probs=139.5
Q ss_pred CEECC-CEEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCC
Q ss_conf 75655-10888985998898995655988998998898986686891684686553114342232102333122222233
Q gi|255764481|r 8 PIIHP-LALVEEGAVIGPNSLIGPFCCVGSEVEIGAGVELISHCVVAGKTKIGDFTKVFPMAVLGGDTQSKYHNFVGTEL 86 (271)
Q Consensus 8 ~~Ihp-sA~I~~~a~Ig~~v~Igp~~~I~~~v~IG~~~~I~~~v~I~g~t~IG~~~~I~~~a~Ig~~~qd~~~~g~~~~v 86 (271)
T Consensus 3 ~~i~p~s~~I~~~v~IG~~v~I~p~~~I~~~v~IG~~~~Ig~~~~I-~~~~IG~~~~I~~~~vi~~~~-------ig~~~ 74 (193)
T cd03353 3 TLIDPETTYIDGDVEIGVDVVIDPGVILEGKTVIGEDCVIGPNCVI-KDSTIGDGVVIKASSVIEGAV-------IGNGA 74 (193)
T ss_pred EEECCCEEEECCCCEECCCCEECCCEEEECCCEECCCCEECCCEEE-CCCEECCCCEECCCEECCCCE-------ECCCC
T ss_conf 7958980699998299999999898299298599999899573457-786888874002100113525-------17652
Q ss_pred CCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCHHCC-----CCCCCCCCCCCCCCCCCCCCCCCCC-CEECCCEEEC
Q ss_conf 2222222122443211112222----2212233200001-----6655433100123443223452455-3214860652
Q gi|255764481|r 87 LVGKKCVIREGVTINRGTVEYG----GKTIVGDNNFFLA-----NSHVAHDCKLGNGIVLSNNVMIAGH-VIVDDRVVFG 156 (271)
Q Consensus 87 ~IG~~~~Ire~v~I~~gt~~~~----~~T~IG~~~~i~~-----~~hI~Hd~~IG~~vii~n~~~l~G~-v~Igd~~~IG 156 (271)
T Consensus 75 ~IG~~~~i~~~~~I~~~~~iG~~v~i~~~~ig~~~~i~h~~~igd~~Ig~~v~Ig~~~i~~n~~g~~~~~t~IGd~v~IG 154 (193)
T cd03353 75 TVGPFAHLRPGTVLGEGVHIGNFVEIKKSTIGEGSKANHLSYLGDAEIGEGVNIGAGTITCNYDGVNKHRTVIGDNVFIG 154 (193)
T ss_pred EECCCEEECCCCEECCEEEECCCEEEECCCCCCCCEECCEEECCCCEECCCCEECCCEEEECCCCCCCCCCEECCCCEEC
T ss_conf 66685076587688751674253576444336884877244618856777888866758873434335623433561898
Q ss_pred CCCCCCCCEEEECCCEEECCCCCCCCCCCCCHHHHCCCCC
Q ss_conf 3444336506404743501321122333310001074532
Q gi|255764481|r 157 GGSAVHQFTRIGKYAFIGGMTGVVHDVIPYGILNGNPGAL 196 (271)
Q Consensus 157 ~~~~v~~~v~IG~~a~ig~gs~V~kdVpp~~~~~G~pa~~ 196 (271)
T Consensus 155 ~~~~i~~~v~IG~~a~Igags~V~kdVpp~~lvvg-~~~~ 193 (193)
T cd03353 155 SNSQLVAPVTIGDGATIAAGSTITKDVPPGALAIA-RARQ 193 (193)
T ss_pred CCCEEECCEEECCCCEECCCCEECCCCCCCCEEEE-ECCC
T ss_conf 89879898399999899869888842399978996-2489