HHsearch alignment for GI: 255764481 and conserved domain: cd03353

>cd03353 LbH_GlmU_C N-acetyl-glucosamine-1-phosphate uridyltransferase (GlmU), C-terminal left-handed beta-helix (LbH) acetyltransferase domain: GlmU is also known as UDP-N-acetylglucosamine pyrophosphorylase. It is a bifunctional bacterial enzyme that catalyzes two consecutive steps in the formation of UDP-N-acetylglucosamine (UDP-GlcNAc), an important precursor in bacterial cell wall formation. The two enzymatic activities, uridyltransferase and acetyltransferase, are carried out by two independent domains. The C-terminal LbH domain possesses the acetyltransferase activity. It catalyzes the CoA-dependent acetylation of GlcN-1-phosphate to GlcNAc-1-phosphate. The LbH domain contains 10 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X. The acetyltransferase active site is located at the interface between two subunits of the active LbH trimer.
Probab=99.89  E-value=6.3e-23  Score=163.84  Aligned_cols=159  Identities=24%  Similarity=0.387  Sum_probs=122.2

Q ss_pred             CCCCCCCEECCCEEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEEEEEEECCCCCEEEECCCCCCCCC
Q ss_conf             50579975655108889859988989956559889989988989866868916846865531143422321023331222
Q gi|255764481|r    2 SRMGNNPIIHPLALVEEGAVIGPNSLIGPFCCVGSEVEIGAGVELISHCVVAGKTKIGDFTKVFPMAVLGGDTQSKYHNF   81 (271)
Q Consensus         2 ~~i~~~~~IhpsA~I~~~a~Ig~~v~Igp~~~I~~~v~IG~~~~I~~~v~I~g~t~IG~~~~I~~~a~Ig~~~qd~~~~g   81 (271)
T Consensus        16 v~IG~~v~I~p~~~I~~~v~IG~~~~Ig~~~~I-~~~~IG~~~~I~~~~vi~-~~~ig~~~~IG~~~~i~~~--------   85 (193)
T cd03353          16 VEIGVDVVIDPGVILEGKTVIGEDCVIGPNCVI-KDSTIGDGVVIKASSVIE-GAVIGNGATVGPFAHLRPG--------   85 (193)
T ss_pred             CEECCCCEECCCEEEECCCEECCCCEECCCEEE-CCCEECCCCEECCCEECC-CCEECCCCEECCCEEECCC--------
T ss_conf             299999999898299298599999899573457-786888874002100113-5251765266685076587--------


Q ss_pred             CCCCCCCCCCCCCCCCCC-----CCCCCCCCC----CCCCCCCCCHHCCCCCCC-------CCCCCCCCCCCCCCCCCCC
Q ss_conf             222332222222122443-----211112222----221223320000166554-------3310012344322345245
Q gi|255764481|r   82 VGTELLVGKKCVIREGVT-----INRGTVEYG----GKTIVGDNNFFLANSHVA-------HDCKLGNGIVLSNNVMIAG  145 (271)
Q Consensus        82 ~~~~v~IG~~~~Ire~v~-----I~~gt~~~~----~~T~IG~~~~i~~~~hI~-------Hd~~IG~~vii~n~~~l~G  145 (271)
T Consensus        86 ----~~I~~~~~iG~~v~i~~~~ig~~~~i~h~~~igd~~Ig~~v~Ig~~~i~~n~~g~~~~~t~IGd~v~IG~~~~i~~  161 (193)
T cd03353          86 ----TVLGEGVHIGNFVEIKKSTIGEGSKANHLSYLGDAEIGEGVNIGAGTITCNYDGVNKHRTVIGDNVFIGSNSQLVA  161 (193)
T ss_pred             ----CEECCEEEECCCEEEECCCCCCCCEECCEEECCCCEECCCCEECCCEEEECCCCCCCCCCEECCCCEECCCCEEEC
T ss_conf             ----6887516742535764443368848772446188567778888667588734343356234335618988987989


Q ss_pred             CCEECCCEEECCCCCCCCCEEEECCCEEECC
Q ss_conf             5321486065234443365064047435013
Q gi|255764481|r  146 HVIVDDRVVFGGGSAVHQFTRIGKYAFIGGM  176 (271)
Q Consensus       146 ~v~Igd~~~IG~~~~v~~~v~IG~~a~ig~g  176 (271)
T Consensus       162 ~v~IG~~a~Igags~V~kdV--pp~~lvvg~  190 (193)
T cd03353         162 PVTIGDGATIAAGSTITKDV--PPGALAIAR  190 (193)
T ss_pred             CEEECCCCEECCCCEECCCC--CCCCEEEEE
T ss_conf             83999998998698888423--999789962