HHsearch alignment for GI: 255764482 and conserved domain: COG0030
>COG0030 KsgA Dimethyladenosine transferase (rRNA methylation) [Translation, ribosomal structure and biogenesis].
Probab=99.21 E-value=7.7e-11 Score=80.37 Aligned_cols=86 Identities=19% Similarity=0.197 Sum_probs=70.3
Q ss_pred HHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCC
Q ss_conf 24389985578999587843899999986799889999889899998899999806645222530200444235310000
Q gi|255764482|r 4 ASLVNATGSFHLADLGAGAGAAGLAVASRLHEAQILLAERSPLMAHYARKTLALPANAQISKRISLIEVDVTLVGENRNL 83 (225)
Q Consensus 4 a~~~~~~~~~~VLDlGcG~G~~~l~la~r~~~~~v~gvD~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 83 (225)
T Consensus 23 v~~a~~~~~d~VlEIGpG~GaLT~~Ll~~--~~~v~aiEiD~~l~~~L~~~~~------~~~n~~vi~~DaLk~d~~~l~ 94 (259)
T COG0030 23 VEAANISPGDNVLEIGPGLGALTEPLLER--AARVTAIEIDRRLAEVLKERFA------PYDNLTVINGDALKFDFPSLA 94 (259)
T ss_pred HHHCCCCCCCEEEEECCCCCHHHHHHHHH--CCEEEEEEECHHHHHHHHHHHC------CCCCEEEEECCHHCCCCHHHC
T ss_conf 98557899986999789877889999960--6957999968899999997506------566559994724247513515
Q ss_pred CCCCCCCCCEEEECCCCCCC
Q ss_conf 12357652057722654464
Q gi|255764482|r 84 AGLKNNFYDHVIMNPPFNER 103 (225)
Q Consensus 84 ~~~~~~~fDlii~nPPy~~~ 103 (225)
T Consensus 95 ------~~~~vVaNlPY~Is 108 (259)
T COG0030 95 ------QPYKVVANLPYNIS 108 (259)
T ss_pred ------CCCEEEECCCCCCC
T ss_conf ------78889980897656