HHsearch alignment for GI: 255764482 and conserved domain: COG0144
>COG0144 Sun tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis].
Probab=99.42 E-value=2.6e-12 Score=88.69 Aligned_cols=135 Identities=16% Similarity=0.197 Sum_probs=97.9
Q ss_pred CCHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCC
Q ss_conf 6624389985578999587843899999986799--88999988989999889999980664522253020044423531
Q gi|255764482|r 2 ILASLVNATGSFHLADLGAGAGAAGLAVASRLHE--AQILLAERSPLMAHYARKTLALPANAQISKRISLIEVDVTLVGE 79 (225)
Q Consensus 2 lLa~~~~~~~~~~VLDlGcG~G~~~l~la~r~~~--~~v~gvD~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~D~~~~~~ 79 (225)
T Consensus 147 l~a~~L~p~pge~VlD~cAAPGGKTthla~~~~~~~~iV~A~D~~~~Rl~~l~~nl~RlG~~n----v~~~~~d~~~~~~ 222 (355)
T COG0144 147 LPALVLDPKPGERVLDLCAAPGGKTTHLAELMENEGAIVVAVDVSPKRLKRLRENLKRLGVRN----VIVVNKDARRLAE 222 (355)
T ss_pred HHHHHCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCC----EEEEECCCCCCCC
T ss_conf 679971999979688807999769999999668998769974498789999999999719983----4899513301431
Q ss_pred CCCCCCCCCCCCCEEEECCCCCCCCCC-CCCCHHHH---HHHCCCCCCHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 000012357652057722654464465-47885455---652056689899999999862469837870
Q gi|255764482|r 80 NRNLAGLKNNFYDHVIMNPPFNERIGT-MTPDKIKE---EAHVMLEDSFEKWIRTACAIMRSSGQLSLI 144 (225)
Q Consensus 80 ~~~~~~~~~~~fDlii~nPPy~~~~~~-~~~~~~~~---~a~~~~~~~~~~~~~~a~~lLkpgG~~~~i 144 (225)
T Consensus 223 ~~----~~~~~fD~iLlDaPCSg~G~irr~Pd~~~~~~~~~i~~l~~lQ~~iL~~a~~~lk~GG~LVYS 287 (355)
T COG0144 223 LL----PGGEKFDRILLDAPCSGTGVIRRDPDVKWRRTPEDIAELAKLQKEILAAALKLLKPGGVLVYS 287 (355)
T ss_pred CC----CCCCCCCEEEECCCCCCCEEECCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf 13----455777859987999877113358123203899999999999999999999844879889999