HHsearch alignment for GI: 255764482 and conserved domain: COG5459

>COG5459 Predicted rRNA methylase [Translation, ribosomal structure and biogenesis].
Probab=96.25  E-value=0.018  Score=33.21  Aligned_cols=116  Identities=21%  Similarity=0.218  Sum_probs=62.6

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCC
Q ss_conf             9985578999587843899999986799-889999889899998899999806645222530200444235310000123
Q gi|255764482|r    8 NATGSFHLADLGAGAGAAGLAVASRLHE-AQILLAERSPLMAHYARKTLALPANAQISKRISLIEVDVTLVGENRNLAGL   86 (225)
Q Consensus         8 ~~~~~~~VLDlGcG~G~~~l~la~r~~~-~~v~gvD~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   86 (225)
T Consensus       110 ~dfapqsiLDvG~GPgtgl~A~n~i~Pdl~sa~ile~sp~lrkV-~~tl~~nv~t~~---td~r~s~vt~dR----l~lp  181 (484)
T COG5459         110 PDFAPQSILDVGAGPGTGLWALNDIWPDLKSAVILEASPALRKV-GDTLAENVSTEK---TDWRASDVTEDR----LSLP  181 (484)
T ss_pred             CCCCCCHHHCCCCCCCHHHHHHCCCCCCCHHHHHHCCCHHHHHH-HHHHHHHCCCCC---CCCCCCCCCHHC----CCCC
T ss_conf             88686102003778752123320337880221234048999999-999986045334---777788650210----4788


Q ss_pred             CCCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEECC
Q ss_conf             576520577226544644654788545565205668989999999986246983787028
Q gi|255764482|r   87 KNNFYDHVIMNPPFNERIGTMTPDKIKEEAHVMLEDSFEKWIRTACAIMRSSGQLSLIAR  146 (225)
Q Consensus        87 ~~~~fDlii~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~a~~lLkpgG~~~~i~~  146 (225)
T Consensus       182 ~ad~ytl~i~~~---------------eLl~d~~ek~i~~~ie~lw~l~~~gg~lVivEr  226 (484)
T COG5459         182 AADLYTLAIVLD---------------ELLPDGNEKPIQVNIERLWNLLAPGGHLVIVER  226 (484)
T ss_pred             CCCEEEHHHHHH---------------HHCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEC
T ss_conf             322363334354---------------444355743188999999986068974999717