HHsearch alignment for GI: 255764482 and conserved domain: PRK04338
>PRK04338 N(2),N(2)-dimethylguanosine tRNA methyltransferase; Provisional.
Probab=98.62 E-value=3.6e-07 Score=59.67 Aligned_cols=156 Identities=16% Similarity=0.246 Sum_probs=101.9
Q ss_pred CCHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCC
Q ss_conf 66243899855789995878438999999867998899998898999988999998066452225302004442353100
Q gi|255764482|r 2 ILASLVNATGSFHLADLGAGAGAAGLAVASRLHEAQILLAERSPLMAHYARKTLALPANAQISKRISLIEVDVTLVGENR 81 (225)
Q Consensus 2 lLa~~~~~~~~~~VLDlGcG~G~~~l~la~r~~~~~v~gvD~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~D~~~~~~~~ 81 (225)
T Consensus 42 l~~~~~~~~~~~~ilDalsasGiR~iRy~~E~~~~~v~~NDi~~~a~~~i~~N~~~N~~~----~~~v~~~dAn~lm~~- 116 (376)
T PRK04338 42 LALKAFGPKRRKSVLDALSASGIRGIRYALETGVEKVILNDINPDAVELIKKNLELNGLE----NAEVFNEDANVLLHE- 116 (376)
T ss_pred HHHHHHHCCCCCEEEECCCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCC----CEEEECCCHHHHHHH-
T ss_conf 999997420697687406765499999987279987999569999999999999982998----269813248999983-
Q ss_pred CCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEC----------CH----
Q ss_conf 0012357652057722654464465478854556520566898999999998624698378702----------88----
Q gi|255764482|r 82 NLAGLKNNFYDHVIMNPPFNERIGTMTPDKIKEEAHVMLEDSFEKWIRTACAIMRSSGQLSLIA----------RP---- 147 (225)
Q Consensus 82 ~~~~~~~~~fDlii~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~a~~lLkpgG~~~~i~----------~~---- 147 (225)
T Consensus 117 -----~~~~fD~IDlDP-fGS---------------------p~pflDsAi~~v~~~GlL~vTaTD~a~L~G~~~~~~~r 169 (376)
T PRK04338 117 -----NERKFDVVDIDP-FGS---------------------PAPFLDSAIRALRRGGLLCVTATDTAVLCGAYPKSCLR 169 (376)
T ss_pred -----CCCCCCEEEECC-CCC---------------------CCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHH
T ss_conf -----787587786789-999---------------------20879999998403988999946861004888046878
Q ss_pred -------------HHHHHH-HHHHH--CCCCCEEEEEECCCCCCCCEEEEEEEEECCC
Q ss_conf -------------889999-99852--1788469998145896983099999997788
Q gi|255764482|r 148 -------------QSLIQI-VNACA--RRIGSLEITPLHPREGECASRILVTGRKGMR 189 (225)
Q Consensus 148 -------------~~l~~~-l~~~~--~~~~~~~i~~v~~~~~~~~~~vlv~~~k~~~ 189 (225)
T Consensus 170 ~Yga~~~~~~~~hE~glRiLl~~i~r~Aa~~~~~i~PllS~~~~hy~Rv~vrV~~~~~ 227 (376)
T PRK04338 170 KYGAVPLKTEFYHEMGLRILIGYVAREAAKYDKGLKPLLSHVTDHYYRVFLKVERGAK 227 (376)
T ss_pred HHCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCEEEEEEEEECCHH
T ss_conf 7177632571357788999999999999983885389999860758999999806778