HHsearch alignment for GI: 255764482 and conserved domain: PRK05031
>PRK05031 tRNA (uracil-5-)-methyltransferase; Validated.
Probab=99.55 E-value=5.7e-13 Score=92.40 Aligned_cols=145 Identities=17% Similarity=0.175 Sum_probs=97.1
Q ss_pred HCCCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCC---
Q ss_conf 38998557899958784389999998679988999988989999889999980664522253020044423531000---
Q gi|255764482|r 6 LVNATGSFHLADLGAGAGAAGLAVASRLHEAQILLAERSPLMAHYARKTLALPANAQISKRISLIEVDVTLVGENRN--- 82 (225)
Q Consensus 6 ~~~~~~~~~VLDlGcG~G~~~l~la~r~~~~~v~gvD~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~D~~~~~~~~~--- 82 (225)
T Consensus 203 ~~~~~~~-~vlDLYcG~Gtfsl~LA~~--~~~V~gVE~~~~aV~~A~~NA~~N~i~N----~~fi~~~a~~~~~~~~~~~ 275 (363)
T PRK05031 203 ATKGSKG-DLLELYCGNGNFTLALARN--FRRVLATEISKPSVAAAQYNIAANGIDN----VQIIRMSAEEFTQAMNGVR 275 (363)
T ss_pred HHHCCCC-CEEEEECCCCHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHCCCCC----EEEEECCHHHHHHHHHCCC
T ss_conf 7613898-2898605866426998862--6879999538999999999999869986----4999658999999873431
Q ss_pred ----C--CCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHH
Q ss_conf ----0--1235765205772265446446547885455652056689899999999862469837870288889999998
Q gi|255764482|r 83 ----L--AGLKNNFYDHVIMNPPFNERIGTMTPDKIKEEAHVMLEDSFEKWIRTACAIMRSSGQLSLIARPQSLIQIVNA 156 (225)
Q Consensus 83 ----~--~~~~~~~fDlii~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~a~~lLkpgG~~~~i~~~~~l~~~l~~ 156 (225)
T Consensus 276 ~~~~l~~~~~~~~~~d~vvvDPPR~---G-----------------l~~~~~~~i~~---~~rIVYVSCnP~TlaRDl~~ 332 (363)
T PRK05031 276 EFRRLKGIDLKSYNFSTIFVDPPRA---G-----------------LDEETLKLVQN---YERILYISCNPETLKENLET 332 (363)
T ss_pred HHHCCCCCCCCCCCCCEEEECCCCC---C-----------------CCHHHHHHHHC---CCEEEEEECCHHHHHHHHHH
T ss_conf 0100124664435586489899988---8-----------------74999999836---89099992898999999999
Q ss_pred HHCCCCCEEEEEECCCCCCCCEEE
Q ss_conf 521788469998145896983099
Q gi|255764482|r 157 CARRIGSLEITPLHPREGECASRI 180 (225)
Q Consensus 157 ~~~~~~~~~i~~v~~~~~~~~~~v 180 (225)
T Consensus 333 L~~~y~l~~v~~vDmFPqT~HvE~ 356 (363)
T PRK05031 333 LSQTHKVERFALFDQFPYTHHMEC 356 (363)
T ss_pred HHHCCEEEEEEEECCCCCCCCEEE
T ss_conf 874465889998426999972789