HHsearch alignment for GI: 255764482 and conserved domain: PRK09489

>PRK09489 rsmC 16S ribosomal RNA m2G1207 methyltransferase; Provisional.
Probab=99.89  E-value=4e-22  Score=144.03  Aligned_cols=117  Identities=26%  Similarity=0.363  Sum_probs=93.6

Q ss_pred             CCHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCC
Q ss_conf             66243899855789995878438999999867998899998898999988999998066452225302004442353100
Q gi|255764482|r    2 ILASLVNATGSFHLADLGAGAGAAGLAVASRLHEAQILLAERSPLMAHYARKTLALPANAQISKRISLIEVDVTLVGENR   81 (225)
Q Consensus         2 lLa~~~~~~~~~~VLDlGcG~G~~~l~la~r~~~~~v~gvD~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~D~~~~~~~~   81 (225)
T Consensus       187 lLL~~l~~~~~g~VLDlGCG~Gvi~~~la~~~p~~~v~l~Dv~a~Al~~ar~nl~~N~l~~-----~v~~sd~~~~----  257 (342)
T PRK09489        187 LLLSTLTPHTKGKVLDVGCGAGVLSAVLAQHSPKIRLTLCDVSAPAVEASRATLAANGLEG-----EVFASNVFSE----  257 (342)
T ss_pred             HHHHHCCCCCCCCEEEECCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCC-----EEEECCCCCC----
T ss_conf             9997378324884786067817999999986999769999688999999999899809886-----8997564456----


Q ss_pred             CCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEC
Q ss_conf             0012357652057722654464465478854556520566898999999998624698378702
Q gi|255764482|r   82 NLAGLKNNFYDHVIMNPPFNERIGTMTPDKIKEEAHVMLEDSFEKWIRTACAIMRSSGQLSLIA  145 (225)
Q Consensus        82 ~~~~~~~~~fDlii~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~a~~lLkpgG~~~~i~  145 (225)
T Consensus       258 -----v~~~fD~IvsNPPFH~G~~~-------------~~~i~~~fi~~A~~~L~~gG~L~iVA  303 (342)
T PRK09489        258 -----IKGRFDMIISNPPFHDGIQT-------------SLDAAQTLIRGAVRHLNSGGELRIVA  303 (342)
T ss_pred             -----CCCCCCEEEECCCCCCCCCC-------------CHHHHHHHHHHHHHHHHCCCEEEEEE
T ss_conf             -----55678989968852157526-------------58999999999998612498899998