HHsearch alignment for GI: 255764482 and conserved domain: PRK09489
>PRK09489 rsmC 16S ribosomal RNA m2G1207 methyltransferase; Provisional.
Probab=99.89 E-value=4e-22 Score=144.03 Aligned_cols=117 Identities=26% Similarity=0.363 Sum_probs=93.6
Q ss_pred CCHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCC
Q ss_conf 66243899855789995878438999999867998899998898999988999998066452225302004442353100
Q gi|255764482|r 2 ILASLVNATGSFHLADLGAGAGAAGLAVASRLHEAQILLAERSPLMAHYARKTLALPANAQISKRISLIEVDVTLVGENR 81 (225)
Q Consensus 2 lLa~~~~~~~~~~VLDlGcG~G~~~l~la~r~~~~~v~gvD~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~D~~~~~~~~ 81 (225)
T Consensus 187 lLL~~l~~~~~g~VLDlGCG~Gvi~~~la~~~p~~~v~l~Dv~a~Al~~ar~nl~~N~l~~-----~v~~sd~~~~---- 257 (342)
T PRK09489 187 LLLSTLTPHTKGKVLDVGCGAGVLSAVLAQHSPKIRLTLCDVSAPAVEASRATLAANGLEG-----EVFASNVFSE---- 257 (342)
T ss_pred HHHHHCCCCCCCCEEEECCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCC-----EEEECCCCCC----
T ss_conf 9997378324884786067817999999986999769999688999999999899809886-----8997564456----
Q ss_pred CCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEC
Q ss_conf 0012357652057722654464465478854556520566898999999998624698378702
Q gi|255764482|r 82 NLAGLKNNFYDHVIMNPPFNERIGTMTPDKIKEEAHVMLEDSFEKWIRTACAIMRSSGQLSLIA 145 (225)
Q Consensus 82 ~~~~~~~~~fDlii~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~a~~lLkpgG~~~~i~ 145 (225)
T Consensus 258 -----v~~~fD~IvsNPPFH~G~~~-------------~~~i~~~fi~~A~~~L~~gG~L~iVA 303 (342)
T PRK09489 258 -----IKGRFDMIISNPPFHDGIQT-------------SLDAAQTLIRGAVRHLNSGGELRIVA 303 (342)
T ss_pred -----CCCCCCEEEECCCCCCCCCC-------------CHHHHHHHHHHHHHHHHCCCEEEEEE
T ss_conf -----55678989968852157526-------------58999999999998612498899998