HHsearch alignment for GI: 255764482 and conserved domain: PRK11783
>PRK11783 rlmL 23S rRNA m(2)G2445 methyltransferase; Provisional.
Probab=99.24 E-value=4.4e-11 Score=81.76 Aligned_cols=86 Identities=23% Similarity=0.257 Sum_probs=60.0
Q ss_pred CCCCEEEEECCCHHHHHHHHHH----------H--------------------------------CCCCEEEEEECCHHH
Q ss_conf 8557899958784389999998----------6--------------------------------799889999889899
Q gi|255764482|r 10 TGSFHLADLGAGAGAAGLAVAS----------R--------------------------------LHEAQILLAERSPLM 47 (225)
Q Consensus 10 ~~~~~VLDlGcG~G~~~l~la~----------r--------------------------------~~~~~v~gvD~~~~~ 47 (225)
T Consensus 193 ~~~~pLvDPMCGSGTllIEAAliA~~iAPGl~R~~fgF~~W~~~d~~lW~~l~~eA~~r~~~~~~~~~~~i~G~D~D~~a 272 (716)
T PRK11783 193 QGGTPLLDPMCGSGTLLIEAAMMAADIAPGLHRERWGFSAWLGHDEALWQELLEEAQERARAGLAECSPKFYGSDIDPRV 272 (716)
T ss_pred CCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHH
T ss_conf 79981344666843789999999847798865454564115688999999999999986542234688718999599899
Q ss_pred HHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC
Q ss_conf 99889999980664522253020044423531000012357652057722654464
Q gi|255764482|r 48 AHYARKTLALPANAQISKRISLIEVDVTLVGENRNLAGLKNNFYDHVIMNPPFNER 103 (225)
Q Consensus 48 ~~~A~~n~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~fDlii~nPPy~~~ 103 (225)
T Consensus 273 i~~Ar~Na~~AGv---~~~I~f~~~d~~~l~~p~-----~~~~~Gliv~NPPYGER 320 (716)
T PRK11783 273 IQAARRNARRAGV---EELITFEVKDVADLKNPL-----PKGPTGLVISNPPYGER 320 (716)
T ss_pred HHHHHHHHHHCCC---CCCCEEEECCHHHCCCCC-----CCCCCCEEEECCCHHCC
T ss_conf 9999999998199---886299956789857987-----77898289967852201