HHsearch alignment for GI: 255764482 and conserved domain: TIGR00417
>TIGR00417 speE spermidine synthase; InterPro: IPR001045 Synonym(s): Spermidine aminopropyltransferase A group of polyamine biosynthetic enzymes involved in the fifth (last) step in the biosynthesis of spermidine from arginine and methionine which includes; spermidine synthase (), spermine synthase () and putrescine N-methyltransferase () . The Thermotoga maritima spermidine synthase monomer consists of two domains: an N-terminal domain composed of six beta-strands, and a Rossmann-like C- terminal domain . The larger C-terminal catalytic core domain consists of a seven-stranded beta-sheet flanked by nine alpha helices. This domain resembles a topology observed in a number of nucleotide and dinucleotide-binding enzymes, and in S-adenosyl-L-methionine (AdoMet)- dependent methyltransferase (MTases) . ; GO: 0003824 catalytic activity.
Probab=97.01 E-value=0.0016 Score=39.01 Aligned_cols=118 Identities=14% Similarity=0.082 Sum_probs=85.5
Q ss_pred CCCEEEEECCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHC-CCCCCCCCEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 5578999587843899999986799889999889899998899999806-645222530200444235310000123576
Q gi|255764482|r 11 GSFHLADLGAGAGAAGLAVASRLHEAQILLAERSPLMAHYARKTLALPA-NAQISKRISLIEVDVTLVGENRNLAGLKNN 89 (225)
Q Consensus 11 ~~~~VLDlGcG~G~~~l~la~r~~~~~v~gvD~~~~~~~~A~~n~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 89 (225)
T Consensus 75 NPk~VLvIGGGDGG~lREV~KH~sVE~~~lVdID~~VI~~srkyLP~~~~g~~dderv~~~i~DG~~fl~~~-Gasdv~~ 153 (284)
T TIGR00417 75 NPKKVLVIGGGDGGVLREVVKHKSVEKATLVDIDEKVIELSRKYLPKLAAGSFDDERVDLAIDDGFKFLRDT-GASDVEK 153 (284)
T ss_pred CCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCHHHHHHHHHHCHHHHCCCCCCCEEEEEECCCHHHHHHC-CCCCCCC
T ss_conf 885478996388846878875598167999972747899988826121056658880358982517989761-5222212
Q ss_pred CCCEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEE
Q ss_conf 520577226544644654788545565205668989999999986246983787
Q gi|255764482|r 90 FYDHVIMNPPFNERIGTMTPDKIKEEAHVMLEDSFEKWIRTACAIMRSSGQLSL 143 (225)
Q Consensus 90 ~fDlii~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~a~~lLkpgG~~~~ 143 (225)
T Consensus 154 ~fDVIIvDst-----DPvG---------Pa~~LF~~~Fy~~~~~aL~~~Gv~v~ 193 (284)
T TIGR00417 154 KFDVIIVDST-----DPVG---------PAETLFTKEFYELLKKALNEDGVIVA 193 (284)
T ss_pred CCCEEEEECC-----CCCC---------CCCCHHHHHHHHHHHHHCCCCCEEEE
T ss_conf 1447997277-----8956---------55410217999999985299988998