HHsearch alignment for GI: 255764482 and conserved domain: TIGR02081
>TIGR02081 metW methionine biosynthesis protein MetW; InterPro: IPR010743 This family consists of several bacterial and one archaeal methionine biosynthesis MetW proteins. Biosynthesis of methionine from homoserine in Pseudomonas putida takes place in three steps. The first step is the acylation of homoserine to yield an acyl-L-homoserine. This reaction is catalysed by the products of the metXW genes and is equivalent to the first step in enterobacteria, Gram-positive bacteria and fungi, except that in these microorganisms the reaction is catalysed by a single polypeptide (the product of the metA gene in Escherichia coli and the met5 gene product in Neurospora crassa). In Pseudomonas putida, as in Gram-positive bacteria and certain fungi, the second and third steps are a direct sulphydrylation that converts the O-acyl-L-homoserine into homocysteine and further methylation to yield methionine. The latter reaction can be mediated by either of the two methionine synthetases present in the cells . .
Probab=99.15 E-value=6.7e-11 Score=80.71 Aligned_cols=102 Identities=14% Similarity=0.103 Sum_probs=69.7
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHCC--C-----CEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCC
Q ss_conf 98557899958784389999998679--9-----8899998898999988999998066452225302004442353100
Q gi|255764482|r 9 ATGSFHLADLGAGAGAAGLAVASRLH--E-----AQILLAERSPLMAHYARKTLALPANAQISKRISLIEVDVTLVGENR 81 (225)
Q Consensus 9 ~~~~~~VLDlGcG~G~~~l~la~r~~--~-----~~v~gvD~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~D~~~~~~~~ 81 (225)
T Consensus 11 Ip~GSRVLDLGCGdG~LL~~L~d~k~v~GPPttehRL~G~Eid~~~v~Ac~~-----------RGv~VIq~Dld~GL~~- 78 (205)
T TIGR02081 11 IPPGSRVLDLGCGDGELLALLRDEKQVRGPPTTEHRLYGIEIDQDGVLACVA-----------RGVSVIQGDLDEGLEA- 78 (205)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEECHHHHHHHHH-----------CCCCEECCCCCCCCCC-
T ss_conf 6888736410168878999999743789888712000102345445999986-----------2520130060034011-
Q ss_pred CCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEECCH
Q ss_conf 001235765205772265446446547885455652056689899999999862469837870288
Q gi|255764482|r 82 NLAGLKNNFYDHVIMNPPFNERIGTMTPDKIKEEAHVMLEDSFEKWIRTACAIMRSSGQLSLIARP 147 (225)
Q Consensus 82 ~~~~~~~~~fDlii~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~a~~lLkpgG~~~~i~~~ 147 (225)
T Consensus 79 ----F~D~~FD~ViLsQTL------------------Qa~~Np~~iL~EmLRv---g~~aIVSFPN 119 (205)
T TIGR02081 79 ----FPDKSFDYVILSQTL------------------QATRNPEEILDEMLRV---GRRAIVSFPN 119 (205)
T ss_pred ----CCCCCCCEEEECHHH------------------HHHHCHHHHHHHHHHH---CCEEEEECCC
T ss_conf ----678876625421356------------------6422568999887767---3851560588