HHsearch alignment for GI: 255764482 and conserved domain: TIGR02143
>TIGR02143 trmA_only tRNA (uracil-5-)-methyltransferase; InterPro: IPR011869 This family consists exclusively of proteins believed to act as tRNA (uracil-5-)-methyltransferase. All members of this entry belong to the Proteobacteria. ; GO: 0009021 tRNA (uracil-5-)-methyltransferase activity, 0008033 tRNA processing.
Probab=98.27 E-value=2.2e-07 Score=60.83 Aligned_cols=116 Identities=20% Similarity=0.296 Sum_probs=73.8
Q ss_pred EEEEECCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCC-------CCCCCC--
Q ss_conf 89995878438999999867998899998898999988999998066452225302004442353-------100001--
Q gi|255764482|r 14 HLADLGAGAGAAGLAVASRLHEAQILLAERSPLMAHYARKTLALPANAQISKRISLIEVDVTLVG-------ENRNLA-- 84 (225)
Q Consensus 14 ~VLDlGcG~G~~~l~la~r~~~~~v~gvD~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~D~~~~~-------~~~~~~-- 84 (225)
T Consensus 206 DLLELYCGNGNFsLaLA~~f~--rVLATEiaK~SV~aAq~Ni~~N~idNv----~i~RlSAEEft~A~~~~R~F~RL~d~ 279 (361)
T TIGR02143 206 DLLELYCGNGNFSLALAQNFE--RVLATEIAKPSVNAAQYNIAANKIDNV----QIIRLSAEEFTEAMNGVREFRRLKDG 279 (361)
T ss_pred CCCEEECCCCCCHHHHHHHHH--HHHHHHCCCCCHHHHHHHHHCCCCCCE----EHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 201000267531044565333--455430240247999999871798831----01023279999986037765465668
Q ss_pred --CCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHH
Q ss_conf --23576520577226544644654788545565205668989999999986246983787028888999999852
Q gi|255764482|r 85 --GLKNNFYDHVIMNPPFNERIGTMTPDKIKEEAHVMLEDSFEKWIRTACAIMRSSGQLSLIARPQSLIQIVNACA 158 (225)
Q Consensus 85 --~~~~~~fDlii~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~a~~lLkpgG~~~~i~~~~~l~~~l~~~~ 158 (225)
T Consensus 280 gIdL~~Y~f~tiFVDPPR-----------------aGlD~---~t~~Lv~~y---~rIlYISCNP~TL~~NL~~L~ 332 (361)
T TIGR02143 280 GIDLKSYNFNTIFVDPPR-----------------AGLDP---DTVKLVQKY---ERILYISCNPETLKENLEQLS 332 (361)
T ss_pred CCCCCCCCCCEEEECCCC-----------------CCCCH---HHHHHHHHC---CCEEEEECCHHHHHHHHHHHH
T ss_conf 863342025602677988-----------------88898---999999625---987998469689999999886