HHsearch alignment for GI: 255764482 and conserved domain: cd00315
>cd00315 Cyt_C5_DNA_methylase Cytosine-C5 specific DNA methylases; Methyl transfer reactions play an important role in many aspects of biology. Cytosine-specific DNA methylases are found both in prokaryotes and eukaryotes. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG dinucleotide, has profound effects on the mammalian genome. These effects include transcriptional repression via inhibition of transcription factor binding or the recruitment of methyl-binding proteins and their associated chromatin remodeling factors, X chromosome inactivation, imprinting and the suppression of parasitic DNA sequences. DNA methylation is also essential for proper embryonic development and is an important player in both DNA repair and genome stability.
Probab=97.70 E-value=0.00012 Score=45.44 Aligned_cols=72 Identities=22% Similarity=0.145 Sum_probs=53.4
Q ss_pred EEEEECCCHHHHHHHHHHHCCCC-EEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 89995878438999999867998-89999889899998899999806645222530200444235310000123576520
Q gi|255764482|r 14 HLADLGAGAGAAGLAVASRLHEA-QILLAERSPLMAHYARKTLALPANAQISKRISLIEVDVTLVGENRNLAGLKNNFYD 92 (225)
Q Consensus 14 ~VLDlGcG~G~~~l~la~r~~~~-~v~gvD~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~fD 92 (225)
T Consensus 2 ~v~dLFsG~GG~s~Gl~~a--G~~~~~a~e~d~~a~~t~~~N~~~----------~~~~~Di~~~~~~~-----~~~~vD 64 (275)
T cd00315 2 RVIDLFAGIGGFRLGLEKA--GFEIVAANEIDKSAAETYEANFPN----------KLIEGDITKIDEKD-----FIPDID 64 (275)
T ss_pred CEEEECCCCCHHHHHHHHC--CCEEEEEEECCHHHHHHHHHHCCC----------CCCCCCHHHCCCCC-----CCCCCC
T ss_conf 5999767807899999986--998999996899999999988799----------95258864465321-----378878
Q ss_pred EEEECCCCCC
Q ss_conf 5772265446
Q gi|255764482|r 93 HVIMNPPFNE 102 (225)
Q Consensus 93 lii~nPPy~~ 102 (225)
T Consensus 65 ll~ggpPCQ~ 74 (275)
T cd00315 65 LLTGGFPCQP 74 (275)
T ss_pred EEEECCCCCC
T ss_conf 8986899987